Rule 294
eval(_1,_2,0.0-9.0e-25),db_ref(_2,hssp),desc(_2,in) = 0
scop_e <= 0.0018
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 0
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,38820.0-54204.0),db_ref(_2,wormpep) = 1
eval(_1,_2,0.0-9.0e-25),sq_len(_2,667.0-1005.0),classification(_2,arthropoda) = 0
-> class mips_01_01_10_04 "degradation of amino acids of the pyruvate family"
Evaluation on training data (2913 items):
at_At1g10060 mips_01_01_01 "Highly Similar to branched-chain amino acid aminotransferase"
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
at_At1g10070 mips_01_01 "unknown protein"
mips_01_01_01
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10
mips_01_01_10_04
mips_01_01_10_04_02
mips_03_03
mips_03_03_01
mips_20
mips_40_16
at_At3g06810 mips_01 "acetyl-coA dehydrogenase, putative"
mips_01_01_10_04
mips_02
mips_01_05
mips_01_06
mips_01_06_04
mips_02_11
mips_02_25
mips_14
mips_14_04
mips_25
mips_25_05
mips_40_16
mips_67
mips_67_15
at_At3g45300 mips_01_01_01_15 "isovaleryl-CoA-dehydrogenase precursor (IVD)"
mips_01_01_01_15_03
mips_01_01_10_04
mips_01_06_04
mips_02_25
at_At5g27410 mips_01_01 "amino acid aminotransferase like protein"
mips_01_01_01
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_20
mips_40_16
at_At5g57850 mips_01_01_01_11 "branched-chain amino acid aminotransferase-like protein"
mips_01_01_01_11_09
mips_01_01_01_15
mips_01_01_01_15_01
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_05
mips_01_01_10
mips_01_01_10_04
mips_03_03_01_01
mips_30_34
mips_30_34_07
at_At5g65780 mips_01_01_01_15 "branched-chain amino acid aminotransferase"
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
Training Accuracy: 7/7 (100.00%)
Training Frequency class 'mips_01_01_10_04': 17/2913 (0.58%)
Evaluation on validation data (1468 items):
at_At1g50090 mips_01_01 "branched-chain amino acid aminotransferase, putative"
mips_01_01_01
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
mips_14
mips_14_04
mips_20
mips_25
mips_25_05
mips_40_16
at_At1g50110 mips_01_01_01_15 "branched-chain amino acid aminotransferase like protein"
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
at_At3g49680 mips_01_01_01_15 "branched-chain-amino-acid transaminase -like protein"
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
mips_03_03_01_01
Validation Accuracy: 3/3 (100.00%)
Validation Frequency class 'mips_01_01_10_04': 7/1468 (0.48%)
Evaluation on propertest data (2441 items):
at_At3g19710 mips_01_01_01_15 "branched-chain amino acid aminotransferase, putative"
mips_01_01_01_15_02
mips_01_01_01_15_03
mips_01_01_01_15_04
mips_01_01_10
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
mips_03_03_01_01
at_At3g51840 mips_01 "Short-chain acyl CoA oxidase"
mips_01_01_10
mips_01_01_10_04
mips_02
mips_01_05
mips_01_06
mips_01_06_04
mips_02_11
mips_02_25
mips_14
mips_14_04
mips_25
mips_25_05
mips_40
mips_40_16
mips_40_19
mips_67
mips_67_15
Propertest Accuracy: 2/2 (100.00%)
Propertest Frequency class 'mips_01_01_10_04': 13/2441 (0.53%)
New (unknown) data (1468 items):
at_At1g06290 - mips_01 "acyl-CoA oxidase, putative, 3' partial"
mips_01_06
mips_01_06_04
mips_30
mips_30_19
mips_40
mips_40_19
at_At1g06310 - mips_01_06_04 "hypothetical protein"
mips_30_19
mips_40_19
at_At1g33330 - mips_05_04 "peptide chain release factor, putative"
mips_05_04_03
mips_05_07
at_At1g62850 - mips_05 "hypothetical protein"
mips_05_04
mips_33
mips_33_03
mips_33_03_01
mips_43
mips_43_03
mips_43_03_01
mips_45
mips_45_03
mips_45_03_03
at_At2g35690 - mips_02 "putative acyl-CoA oxidase"
mips_01_06
mips_01_06_04
mips_40_19
mips_67_15
at_At2g47020 - mips_05 "putative peptide chain release factor"
mips_05_04
mips_05_04_03
mips_05_07
mips_40_16
mips_63
mips_98
at_At3g57190 - mips_05 "putative protein"
mips_05_04
mips_05_04_03
mips_05_07
mips_40_16
at_At3g62910 - mips_05 "translation releasing factor RF-1 -like protein"
mips_05_04
mips_05_04_03
mips_05_07
mips_40_16
at_At4g16760 - mips_01_06_04 "acyl-CoA oxidase like protein"
mips_40_19
at_At5g36170 - mips_05_04_03 "translation releasing factor RF-2"
mips_05_07
mips_40_16
at_At5g41880 - mips_03_01 "DNA polymerase alpha subunit IV (primase)-like protein"
mips_03_01_03
mips_03_03
mips_03_03_02
mips_40_10_99
at_At5g65110 - mips_01_06_04 "acyl-CoA oxidase (gb|AAC13497.1)"
mips_30_19
mips_40_19
------------------
Rule 994
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
ss(_1,_3,a,_2),c_len(_2,30.0-1200.0) = 0
ss(_1,_3,b,_2),ss(_1,_5,a,_4),notequal(_5,_3),notequal(_5,_2),notequal(_4,_3),notequal(_4,_2),c_len(_4,6.0-9.0),ss(_1,_4,c,_6),notequal(_6,_4),notequal(_6,_5),notequal(_6,_3),notequal(_6,_2) = 1
eval(_1,_2,0.0-9.0e-25),desc(_2,precursor) = 1
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,1574.0-38820.0),species(_2,schizosaccharomyces_pombe__fission_yeast_) = 0
-> class mips_01_01_10_05 "degradation of amino acids of the cysteine-aromatic group"
Evaluation on training data (2913 items):
at_At1g37130 mips_01_01_01_07 "nitrate reductase (At1g37130)"
mips_01_01_01_11
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_05_01
mips_01_01_10_05_02
mips_30_27
mips_30_27_01
at_At1g72810 mips_01_01_01_07 "hypothetical protein"
mips_01_01_01_07_03
mips_01_01_01_11
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At1g77760 mips_01_01 "nitrate reductase 1 (NR1)"
mips_01_01_01
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_05_01
mips_01_01_10_05_02
mips_02
mips_02_11
mips_30
mips_30_27
mips_30_27_01
mips_40_16
at_At3g10050 mips_01_01_01_11 "threonine dehydratase/deaminase (OMR1)"
mips_01_01_01_11_01
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_20_25_03
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
at_At3g59760 mips_01_01_01_11 "cysteine synthase"
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
at_At3g61440 mips_01_01 "cysteine synthase (AtcysC1)"
mips_01_01_01
mips_01_01_01_11
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_40_16
at_At4g11640 mips_01_01_01_11 "putative protein"
mips_01_01_01_11_01
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_07
mips_01_20_19
mips_01_20_21
mips_20_25_03
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
at_At4g14880 mips_01_01_01_11 "cytosolic O-acetylserine(thiol)lyase (EC 4.2.99.8)"
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
at_At5g28030 mips_01_01_01_11 "cysteine synthase - like"
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
at_At5g54810 mips_01_01_01_07 "tryptophan synthase beta chain 1 precursor (sp|P14671)"
mips_01_01_01_11
mips_01_01_01_11_13
mips_01_01_10_03
mips_01_01_10_05
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
Training Accuracy: 10/10 (100.00%)
Training Frequency class 'mips_01_01_10_05': 103/2913 (3.54%)
Evaluation on validation data (1468 items):
at_At1g55880 mips_01_01_01_07 "hypothetical protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At2g43750 mips_01_01_01_11 "cysteine synthase (cpACS1)"
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_17
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At5g20840 - mips_01_20_01 "putative protein"
mips_08_07_22
mips_08_16
mips_10_01_09
mips_13_03
mips_13_03_01
mips_13_11_03
mips_13_11_03_07
mips_30_02
mips_30_09
mips_40_09
mips_43
mips_43_03
mips_43_03_13
mips_47
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
at_At5g28020 mips_01_01 "cysteine synthase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
Validation Accuracy: 3/4 (75.00%)
Validation Frequency class 'mips_01_01_10_05': 66/1468 (4.50%)
Evaluation on propertest data (2441 items):
at_At3g22460 mips_01_01_01 "unknown protein"
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10_03
mips_01_01_10_05
mips_01_20_17
mips_01_20_19
mips_01_20_21
mips_40_16
mips_63_21
mips_63_21_17
at_At4g27070 mips_01_01_01_07 "tryptophan synthase beta-subunit (TSB2)"
mips_01_01_01_11
mips_01_01_01_11_13
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At4g29840 mips_01_01_01 "threonine synthase"
mips_01_01_01_07
mips_01_01_01_07_03
mips_01_01_01_11
mips_01_01_01_11_13
mips_01_01_10_03
mips_01_01_10_05
at_At5g27200 - mips_01_06_01 "acyl carrier protein precursor - like"
mips_01_20_05
mips_01_20_05_11
mips_67_04
mips_67_13
mips_67_15
Propertest Accuracy: 3/4 (75.00%)
Propertest Frequency class 'mips_01_01_10_05': 82/2441 (3.36%)
New (unknown) data (1468 items):
at_At1g01900 - mips_06_13 "hypothetical protein"
at_At1g09640 - mips_05_04_02 "unknown protein"
mips_05_07
mips_05_10
mips_05_99
at_At1g12560 - mips_40_01 "hypothetical protein"
at_At1g20190 - mips_40_01 "expansin S2 precursor like protein"
at_At1g26340 - mips_01_06_99 "cytochrome b5 like protein"
mips_02_11_05
at_At1g26770 - mips_30_01 "expansin 10"
mips_40_01
at_At1g54580 - mips_01_06_01 "unknown protein"
mips_02_11
mips_02_11_05
mips_63_09
mips_67_04
mips_67_15
at_At1g54630 - mips_02 "unknown protein"
mips_01_06
mips_01_06_01
mips_02_11
mips_02_11_05
mips_40_16
mips_63_09
mips_67_04
mips_67_15
at_At1g60660 - mips_02_11_05 "Putative Cytochrome B5"
mips_67_15
at_At1g62980 - mips_40_01 "expansin At-EXP6, putative"
at_At1g65290 - mips_02_11_05 "unknown protein"
mips_25_05_25
mips_63_09
mips_67_13
at_At1g69530 - mips_30_01 "expansin-like protein"
mips_40_01
at_At2g03090 - mips_30_01 "expansin like protein"
mips_40_01
at_At2g20750 - mips_40_01 "beta-expansin"
at_At2g28950 - mips_40_01 "putative expansin"
at_At2g32720 - mips_02_11_05 "putative cytochrome b5"
mips_02_13
at_At2g37640 - mips_30_01 "putative expansin"
mips_40_01
at_At2g39700 - mips_40_01 "putative expansin"
at_At2g40610 - mips_40_01 "putative expansin"
at_At2g45110 - mips_30_01 "putative beta-expansin"
mips_40_01
at_At2g46210 - mips_01_06_99 "putative fatty acid desaturase/cytochrome b5 fusion protein"
at_At3g29030 - mips_40_01 "expansin At-EXP5"
at_At3g45960 - no entry null
at_At3g45970 - no entry null
at_At3g55500 - mips_40_01 "expansin-like protein"
at_At3g60570 - mips_30_01 "putative protein"
at_At4g01630 - mips_30 "putative expansin"
mips_30_01
mips_40_01
mips_98
at_At4g27670 - mips_06_01 "heat shock protein 21"
at_At4g28250 - mips_30 "putative beta-expansin/allergen protein"
mips_98
at_At4g38210 - mips_30_01 "expansin -like protein"
mips_40_01
at_At4g38400 - no entry null
at_At5g02260 - mips_40_01 "expansin precursor - like protein"
at_At5g05290 - mips_40_01 "expansin At-EXP2 (gb|AAB38073.1)"
at_At5g16710 - no entry null
at_At5g21150 - mips_05_04_01 "zwille/pinhead-like protein"
mips_05_07
mips_63_03_03
at_At5g39260 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g39270 - mips_30 "expansin-like protein"
mips_40_01
mips_98
at_At5g39280 - mips_40_01 "expansin-like protein"
at_At5g39290 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g39300 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g39310 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g47630 - mips_01_06_01 "acyl carrier protein-like"
mips_02_11
mips_02_11_05
mips_25_05_25
mips_63_09
mips_67_04
mips_67_13
mips_67_15
at_At5g48810 - mips_02 "cytochrome b5 (dbj|BAA74840.1)"
mips_01_06
mips_01_06_01
mips_02_11
mips_02_11_05
mips_40_16
mips_67_04
mips_67_15
at_At5g53560 - mips_01_06_01 "cytochrome b5 (dbj|BAA74839.1)"
mips_01_06_99
mips_02_11
mips_67_04
mips_67_15
at_At5g56320 - mips_40_01 "expansin"
at_At5g67360 - no entry null
------------------
Rule 274
ss(_1,_3,b,_2),alpha_dist(_1,33.33-45.54),c_len(_2,1.0-3.0),b_len(_3,3.0-6.0) = 0
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
ss(_1,_3,a,_2),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_4,a,_5),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3),ss(_1,_5,c,_6),notequal(_6,_4),notequal(_6,_5),notequal(_6,_2),notequal(_6,_3) = 0
eval(_1,_2,0.0-9.0e-25),db_ref(_2,hssp),desc(_2,in) = 0
eval(_1,_2,0.0-9.0e-25),classification(_2,archaea),keyword(_2,complete_proteome) = 0
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,38820.0-54204.0),db_ref(_2,wormpep) = 0
scop_e <= 0.0018
seq_gravy > -0.415
-> class mips_01_06_01_01 "phospholipid biosynthesis"
Evaluation on training data (2913 items):
at_At1g20490 mips_01_05_01_01_03 "hypothetical protein"
mips_01_06_01
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_30_01
mips_40_19
at_At1g20500 mips_01_05_01_01_03 "hypothetical protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
at_At1g20560 mips_01_06_01_01 "unknown protein (At1g20560)"
mips_01_06_04
mips_01_06_07
mips_01_20_35_01
mips_02_25
mips_67_13
at_At1g21530 mips_02 "amp-binding protein, putative"
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_01_20_37
mips_01_20_37_03
mips_02_25
mips_11
mips_11_05
mips_11_05_03
at_At1g21540 mips_01_05_01_01_03 "amp-binding protein, putative"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_02_16
mips_02_16_13
mips_02_25
at_At1g51680 mips_01_06_01_01 "4-coumarate--coenzyme A ligase (At4CL1)"
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_67_13
at_At1g65880 mips_01_06_01 ""
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_02_99
mips_30_01
at_At1g66120 mips_01_06_01_01 "hypothetical protein"
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_25
at_At1g68270 mips_02 "putative amp-binding protein"
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_02_25
at_At1g75960 mips_01_05_01_01_03 "AMP-binding protein, putative"
mips_01_06_01
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At1g76290 mips_01_05_01_01_03 "putative AMP-binding protein"
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_40_19
at_At1g77240 mips_01_05_01_01_03 "hypothetical protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At2g04350 mips_01 "putative acyl-CoA synthetase"
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_01_03
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_06_13
mips_20
mips_25
mips_25_05
mips_25_05_25
mips_40
mips_40_02
mips_40_03
mips_40_16
at_At3g16910 mips_01_06_01 "AMP-binding protein, putative"
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_06_99
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_20_03
mips_40_27
mips_40_27_99
at_At3g23790 mips_01_06_01_01 "AMP-binding protein, putative"
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_05
mips_01_20_05_11
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_01_20_37
mips_01_20_37_03
mips_02_25
at_At4g19010 mips_01_05_01_01_03 "4-coumarate-CoA ligase - like"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_10
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_30_01
mips_40_19
at_At5g16340 mips_01_05_01_01 "AMP-binding protein"
mips_01_05_01_01_03
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
Training Accuracy: 17/17 (100.00%)
Training Frequency class 'mips_01_06_01_01': 38/2913 (1.30%)
Evaluation on validation data (1468 items):
at_At1g20480 mips_01_05 "hypothetical protein"
mips_01_05_01_01
mips_01_05_01_01_03
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At1g65060 mips_01_05_01_01_03 "4-coumarate:CoA ligase 3 (4CL3)"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At2g35560 - mips_14_10_02 "putative serpin"
mips_14_10_02_01
mips_20_25
mips_20_25_16_09
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
mips_63_13
mips_63_13_99
at_At5g04050 - mips_01_03_16 "maturase -like protein"
mips_03_01_05_01
mips_04_05_05_01
at_At5g63380 mips_01_05_01_01_03 "4-coumarate-CoA ligase-like protein"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
Validation Accuracy: 3/5 (60.00%)
Validation Frequency class 'mips_01_06_01_01': 14/1468 (0.95%)
Evaluation on propertest data (2441 items):
at_At1g20510 mips_01_05_01_01_03 "putative 4-coumarate:CoA ligase"
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_16
mips_02_16_13
mips_02_25
at_At1g30520 mips_01_05_01_01_03 "unknown protein (At1g30520)"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_30_01
mips_40_19
at_At1g51330 - mips_20_25 "hypothetical protein"
mips_20_25_16
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g62940 mips_01_06_01_01 "4-coumarate:coenzyme A ligase, putative"
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_67_13
at_At1g63280 - mips_14_10 "hypothetical protein"
mips_14_10_02
mips_14_10_02_01
mips_20_25_16
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g64020 - mips_62_01_07 "hypothetical protein"
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g64400 - mips_01_06_01 "putative acyl-CoA synthetase"
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_06_99
mips_20_03
mips_40_19
mips_40_27
mips_40_27_99
at_At1g65890 mips_01_06_01_01 "putative protein"
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_25
at_At1g74350 - mips_01_03_16 "putative type II intron maturase"
mips_04_05_05_01
at_At2g17650 mips_01_06_01_01 "putative acyl-CoA synthetase"
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_20_05
mips_01_20_05_11
mips_01_20_35_01
mips_02_25
at_At3g21230 mips_02 "putative 4-coumarate:CoA ligase 2"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_03
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At3g21240 mips_01_05_01_01_03 "putative 4-coumarate:CoA ligase 2"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At3g26720 - mips_06_07_02 "alpha-mannosidase, putative"
mips_06_07_02_01
mips_40_25
at_At3g48990 mips_01_05_01_01 "4-coumarate-CoA ligase -like protein"
mips_01_05_01_01_03
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_02_16
mips_02_16_13
mips_02_25
at_At3g55800 - mips_02_01 "sedoheptulose-bisphosphatase precursor"
mips_02_30
mips_40_26
mips_40_26_03
mips_47_03_11
mips_47_03_11_07
at_At5g16370 mips_01_05_01_01_03 "AMP-binding protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
at_At5g23050 mips_01_05_01_01_03 "acetyl-CoA synthetase-like protein"
mips_01_06_01
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_16
mips_02_16_13
mips_02_99
mips_30_01
mips_40_19
at_At5g36880 - mips_01_05_01_01_03 "acetyl-CoA synthetase"
mips_01_06_01
mips_01_06_01_05
mips_02_10
mips_02_16
mips_02_16_13
mips_02_99
mips_40_19
at_At5g38120 mips_01_05_01_01_03 "4-coumarate--CoA ligase -like protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
Propertest Accuracy: 11/19 (57.89%)
Propertest Frequency class 'mips_01_06_01_01': 34/2441 (1.39%)
New (unknown) data (1468 items):
at_At1g02010 - mips_04_09 "hypothetical protein"
mips_06_04
mips_08
mips_08_07
mips_08_07_07
mips_08_07_27
mips_08_16
mips_08_16_05
mips_13_03
mips_13_03_01
mips_25_05_25
mips_40_09
at_At1g12360 - mips_04_09 "unknown protein (At1g12360)"
mips_06_04
mips_08
mips_08_07
mips_08_07_07
mips_08_07_27
mips_08_16
mips_08_16_05
mips_13
mips_13_03
mips_13_03_01
mips_13_03_99
mips_25
mips_25_05
mips_25_05_25
mips_30
mips_30_02
mips_30_03
mips_40_03
mips_40_09
mips_63_01
at_At1g47520 - mips_29_01 "hypothetical protein"
mips_29_02
mips_29_99
at_At1g77140 - mips_08_07 "unknown protein"
mips_08_07_07
mips_08_07_27
mips_08_16
mips_08_16_05
mips_13_03
mips_13_03_01
mips_13_03_99
mips_30_02
mips_30_03
mips_30_09
mips_30_25
mips_40_08
mips_40_09
mips_40_25
at_At2g06950 - no entry null
at_At2g15870 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_02
mips_29_99
at_At2g15920 - mips_10_01 "putative retroelement pol polyprotein"
mips_10_01_01
mips_29
mips_29_01
mips_29_99
at_At2g17980 - mips_08_07 "putative SEC1 family transport protein"
mips_08_07_27
mips_40_08
mips_40_09
at_At2g25830 - no entry null
at_At3g30570 - no entry null
at_At3g48370 - mips_29 "putative protein"
at_At3g54860 - mips_08_07_07 "vacuolar protein sorting protein 33 (VPS33)"
mips_08_07_27
mips_08_16
mips_08_16_05
mips_13_03_99
mips_30_02
mips_30_03
mips_30_09
mips_40_09
mips_45_03_17
mips_62_02_99
at_At3g54970 - no entry null
at_At4g05160 - no entry null
at_At4g12120 - mips_08_07_07 "putative protein"
mips_08_07_27
mips_08_16
mips_08_16_05
mips_13_03_99
mips_30_02
mips_30_03
mips_30_09
mips_40_09
at_At4g15860 - mips_10 "retrotransposon like protein"
mips_10_01
mips_10_01_01
mips_29
mips_29_01
mips_29_99
mips_99
at_At4g17450 - mips_29_01 "retrotransposon like protein"
mips_29_02
mips_29_99
at_At4g27200 - mips_10 "putative protein"
mips_10_01
mips_10_01_01
mips_29
mips_29_01
mips_29_99
at_At4g31740 - mips_08_07 "putative protein"
mips_40_08
mips_40_09
at_At4g36100 - no entry null
------------------
Rule 880
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 0
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
ss(_1,_3,a,_2),coil_dist(_1,53.24-60.98),c_len(_2,9.0-11.0) = 1
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),a_len(_4,6.0-9.0) = 0
ss(_1,_3,c,_2),c_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,0.0-13.03) = 1
-> class mips_01_20_17_01 "biosynthesis of nonprotein amino acids"
Evaluation on training data (2913 items):
at_At1g18140 mips_01_20 "hypothetical protein"
mips_01_20_17
mips_01_20_17_01
mips_01_20_99
mips_11_07
mips_11_07_03
mips_11_07_99
at_At1g71040 mips_01_20 "putative spore coat protein"
mips_01_20_17
mips_01_20_17_01
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_01
mips_01_20_99
mips_08
mips_08_19
mips_11_05
mips_11_05_01
mips_11_05_01_03
mips_11_05_01_99
mips_11_07
mips_11_07_03
mips_11_07_07
mips_11_07_99
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_02
mips_40_34
mips_40_34_09
mips_67_04
mips_67_04_01
mips_67_04_01_01
at_At1g75790 mips_01_20_17 "polymer protein, putative"
mips_01_20_17_01
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At2g29130 mips_01_20_17_01 "putative laccase (diphenol oxidase)"
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At2g30210 mips_01_20_17_01 "putative laccase"
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At2g38080 mips_01_20_17_01 "putative diphenol oxidase"
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At3g13390 mips_01_20_17_01 "L-ascorbate oxidase precursor, putative"
mips_11_07_03
at_At3g13400 mips_01_20 "pollen specific protein, putative"
mips_01_20_17
mips_01_20_17_01
mips_11_07
mips_11_07_03
mips_11_07_99
mips_30_01
at_At4g12420 mips_01_20 "pollen-specific protein - like predicted GPI-anchored protein"
mips_01_20_17
mips_01_20_17_01
mips_01_20_99
mips_11_07
mips_11_07_03
mips_11_07_99
mips_30_01
at_At4g25240 mips_01_05 "Pollen-specific protein precursor like"
mips_01_20_17
mips_01_20_17_01
mips_11_07_03
mips_11_07_99
mips_30
at_At4g37160 mips_01_20_17 "pectinesterase like protein"
mips_01_20_17_01
mips_01_20_99
mips_11_07
mips_11_07_03
mips_30_01
at_At5g05390 mips_01_20_17 "laccase (diphenol oxidase)"
mips_01_20_17_01
mips_01_20_99
mips_11_07
mips_11_07_03
mips_11_07_99
at_At5g07130 mips_01_20_17 "laccase-like protein"
mips_01_20_17_01
mips_01_20_99
mips_11_07
mips_11_07_03
mips_11_07_99
at_At5g51480 mips_01_20_17_01 "predicted GPI-anchored protein"
mips_11_07_03
mips_11_07_99
at_At5g58910 mips_01_20_17_01 "laccase precursor - like protein"
mips_01_20_99
mips_11_07_03
mips_11_07_99
Training Accuracy: 15/15 (100.00%)
Training Frequency class 'mips_01_20_17_01': 23/2913 (0.79%)
Evaluation on validation data (1468 items):
at_At1g21860 mips_01_20_17_01 "pectinesterase, putative"
mips_01_20_99
mips_11_07_03
at_At1g55570 mips_01_20_17_01 "overlap with bases 100,099-109,160 of 'IGF' clone F20N2, gb|AC002328. This region is annotated in the F20N2 entry, gb|AC002328"
mips_11_07_03
at_At1g76160 mips_01_20_17 "putative protein"
mips_01_20_17_01
mips_01_20_99
mips_11_07_03
at_At2g34860 - mips_03 "unknown protein"
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_05
mips_06
mips_06_01
mips_06_04
mips_08
mips_08_04
mips_08_07
mips_11
mips_11_01
mips_13
mips_13_11
mips_40
mips_40_03
mips_40_07
mips_99
at_At5g36210 - mips_20_25_16 "acyl-peptide hydrolase-like"
mips_43
mips_43_03
mips_43_03_09
mips_43_03_09_01
mips_45
mips_45_03
mips_45_03_05
mips_45_03_05_09
mips_63_07
at_At5g45400 - mips_03_01_03 "replication protein A1-like"
mips_03_01_05
mips_03_01_05_01
mips_03_01_05_03
mips_05_04
mips_40_10_99
Validation Accuracy: 3/6 (50.00%)
Validation Frequency class 'mips_01_20_17_01': 5/1468 (0.34%)
Evaluation on propertest data (2441 items):
at_At1g35540 - mips_04_05 "auxin response factor, putative"
mips_04_05_01
mips_04_05_01_04
mips_10_01
mips_10_01_01
mips_20
mips_20_20
mips_20_20_18
mips_25
mips_25_03
at_At1g41830 mips_01_20_17_01 "pectinesterase, putative"
mips_01_20_99
mips_11_07_03
at_At1g65630 - mips_06_01 "serine protease DO, putative"
mips_06_07
mips_06_07_11
mips_06_13
mips_10_05
mips_10_05_01
mips_10_05_01_12
mips_10_05_01_12_05
mips_11_01
mips_11_01_05
mips_11_01_99
mips_14_01
mips_14_01_05
mips_40_07
mips_40_27
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_05
at_At2g23630 mips_01_20_17_01 "putative pectinesterase"
mips_11_07_03
mips_11_07_99
at_At2g31030 - mips_03_01_09 "putative oxysterol-binding protein"
mips_03_01_09_05
mips_63_09
at_At2g40370 mips_01_20_17_01 "putative laccase (diphenol oxidase)"
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At2g46570 mips_01_20_17_01 "diphenol oxidase like protein"
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At3g09220 mips_01_20_17 "putative laccase"
mips_01_20_17_01
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At4g22010 mips_01_20_17 "pectinesterase like protein"
mips_01_20_17_01
mips_11_07_03
mips_11_07_99
at_At5g01040 mips_01 "laccase -like protein"
mips_01_07
mips_01_07_04
mips_01_20
mips_01_20_17
mips_01_20_17_01
mips_01_20_99
mips_11
mips_11_07
mips_11_07_03
mips_11_07_99
mips_99
at_At5g01190 mips_01_20_17_01 "laccase - like protein"
mips_01_20_99
mips_11_07_03
mips_11_07_99
at_At5g48450 mips_01_20_17 "putative protein"
mips_01_20_17_01
mips_01_20_99
mips_11_07
mips_11_07_03
at_At5g60020 mips_01_20_17_01 "laccase - like protein"
mips_01_20_99
mips_11_07_03
mips_11_07_99
Propertest Accuracy: 10/13 (76.92%)
Propertest Frequency class 'mips_01_20_17_01': 20/2441 (0.82%)
New (unknown) data (1468 items):
at_At1g02410 - mips_01 "hypothetical protein"
mips_01_07
mips_01_07_01
mips_02_11_07
mips_02_13
mips_06
mips_06_01
mips_06_10
mips_30
mips_40_16
mips_63_01
mips_63_21
mips_63_21_01
mips_67
mips_67_15
at_At1g05930 - mips_99 "hypothetical protein, 3' partial"
at_At1g11490 - no entry null
at_At1g23590 - no entry null
at_At1g30980 - mips_29_02 "F17F8.10"
at_At1g37050 - mips_29 "putative non-LTR retroelement reverse transcriptase"
mips_29_01
mips_29_02
mips_29_99
mips_99
at_At1g50930 - no entry null
at_At1g60340 - no entry null
at_At1g62240 - no entry null
at_At1g66610 - mips_03 "hypothetical protein"
mips_03_03
mips_03_03_01
mips_06_13
mips_14_04
mips_25_05
mips_25_05_13
mips_33_03_13
mips_35_03_17
at_At1g69900 - no entry null
at_At1g78880 - no entry null
at_At2g01050 - no entry null
at_At2g05650 - no entry null
at_At2g07490 - mips_29_02 "putative Athila retroelement ORF1 protein"
at_At2g16930 - mips_05 "50S ribosomal protein L27"
mips_05_01
mips_05_01_01
mips_06_10
mips_40_03
mips_40_16
mips_63_01
at_At2g20170 - no entry null
at_At2g24680 - no entry null
at_At2g24690 - no entry null
at_At2g39950 - no entry null
at_At2g44210 - no entry null
at_At2g44250 - no entry null
at_At2g44760 - no entry null
at_At2g46530 - mips_20_20 "putative ARF1 family auxin responsive transcription factor"
mips_20_20_18
at_At2g46580 - mips_01_07 "unknown protein"
mips_67_15
at_At3g25780 - no entry null
at_At3g27470 - no entry null
at_At3g29790 - no entry null
at_At3g42390 - no entry null
at_At3g43880 - no entry null
at_At3g53540 - no entry null
at_At3g53950 - mips_01_06 "putative protein"
mips_01_06_01
mips_98
at_At3g57380 - no entry null
at_At3g58600 - no entry null
at_At3g59220 - no entry null
at_At4g00920 - no entry null
at_At4g02770 - mips_02_30 "putative photosystem I reaction center subunit II precursor"
mips_40_26
mips_40_26_03
at_At4g04590 - no entry null
at_At4g08120 - no entry null
at_At4g14030 - mips_01_04 "selenium-binding protein like"
mips_02_11
mips_11_07
mips_63_17
mips_63_17_11
mips_67_15
at_At4g14570 - no entry null
at_At4g16120 - mips_11_07_99 "predicted GPI-anchored protein (by homology)"
at_At4g20380 - mips_14_10 "zinc-finger protein Lsd1"
at_At4g37420 - no entry null
at_At4g39420 - no entry null
at_At5g09780 - no entry null
at_At5g17640 - no entry null
at_At5g18720 - no entry null
at_At5g25470 - no entry null
at_At5g37910 - mips_14_10 "putative protein"
mips_14_10_02
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At5g39890 - no entry null
at_At5g40110 - no entry null
at_At5g40950 - mips_05 "50S ribosomal protein L27"
mips_05_01
mips_05_01_01
mips_05_04
mips_06
mips_06_10
mips_40_03
mips_40_16
mips_63
mips_63_01
at_At5g42660 - no entry null
at_At5g43310 - no entry null
at_At5g49270 - mips_11_07_99 "predicted GPI-anchored protein"
at_At5g51290 - mips_01_04 "unknown protein"
mips_10_05
mips_63_17
mips_63_17_01
at_At5g52700 - no entry null
at_At5g55820 - no entry null
at_At5g60000 - no entry null
at_At5g60150 - no entry null
------------------
Rule 390
seq_mg10_ratio > 0.109
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 0
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,0.0-5.15),a_len(_4,6.0-9.0) = 1
seq_gravy > -0.415
scop_c.87 > 1.6e-23
eval(_1,_2,0.0-9.0e-25),classification(_2,bacteria),db_ref(_2,interpro) = 0
-> class mips_01_20_35_01 "biosynthesis of phenylpropanoids"
Evaluation on training data (2913 items):
at_At1g48820 mips_01_20_13 "hypothetical protein"
mips_01_20_35_01
at_At1g79460 mips_01_20_13 "putative protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At2g23230 mips_01_20_13 "putative vetispiradiene synthase"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At2g37140 mips_01_20_13 "putative vetispiradiene synthase"
mips_01_20_35
mips_01_20_35_01
at_At3g14490 mips_01_20_13 "terpene synthase-related protein, putative"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g29190 mips_01_20 "terpene synthase-related protein"
mips_01_20_13
mips_01_20_35
mips_01_20_35_01
mips_20
mips_20_20
mips_20_20_18
at_At3g32030 mips_01_20_13 "terpene synthase, putative"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g02780 mips_01_20 "ent-kaurene synthetase A - like protein"
mips_01_20_13
mips_01_20_35
mips_01_20_35_01
mips_20
mips_20_20
mips_20_20_18
at_At4g09010 mips_01_20 "unknown protein"
mips_01_20_35
mips_01_20_35_01
mips_11_05
mips_11_07
at_At4g13280 mips_01_20_13 "putative protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g13300 mips_01_20_13 "putative protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g15870 mips_01_20_13 "delta-cadinene synthase like protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g20230 mips_01_20_13 "terpene cyclase like protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g44630 mips_01_20_13 "terpene cyclase/synthase"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
Training Accuracy: 14/14 (100.00%)
Training Frequency class 'mips_01_20_35_01': 134/2913 (4.60%)
Evaluation on validation data (1468 items):
at_At1g04950 - mips_03_01_09 "putative TATA binding protein-associated factor (F13M7.6)"
mips_03_01_09_05
mips_04_05_01_01
at_At1g61680 mips_01_20 "hypothetical protein"
mips_01_20_13
mips_01_20_35
mips_01_20_35_01
mips_20
mips_20_20
mips_20_20_18
at_At1g66020 mips_01 "hypothetical protein"
mips_01_20
mips_01_20_13
mips_01_20_35
mips_01_20_35_01
mips_20
mips_20_20
mips_20_20_18
mips_99
at_At2g03780 - mips_03_01_05_03 "unknown protein"
at_At3g14540 mips_01_20_13 "hypothetical protein"
mips_01_20_35_01
at_At3g25810 mips_01_20_13 "terpene synthase-related protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g45190 - mips_14_04_03 "putative protein"
mips_14_04_03_01
at_At4g20210 mips_01_20_13 "cadinene synthase like protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g23960 mips_01_20_13 "(+)-delta-cadinene synthase (d-cadinene synthase)"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
Validation Accuracy: 6/9 (66.67%)
Validation Frequency class 'mips_01_20_35_01': 57/1468 (3.88%)
Evaluation on propertest data (2441 items):
at_At1g31950 mips_01_20_13 "hypothetical protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g70080 mips_01_20_13 "hypothetical protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g14520 mips_01_20 "hypothetical protein"
mips_01_20_13
mips_01_20_35
mips_01_20_35_01
mips_20
mips_20_20
mips_20_20_18
at_At3g29110 mips_01_20_13 "putative terpene synthase-related protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g15890 - mips_03_03_01_01 "hypothetical protein"
mips_03_03_04
mips_03_03_04_03
mips_03_03_04_07
mips_14_01_03
mips_30_10
mips_30_10_03
mips_40_10_03
at_At4g20200 mips_01_20 "terpene cyclase like protein"
mips_01_20_13
mips_01_20_35
mips_01_20_35_01
mips_20
mips_20_20
mips_20_20_18
at_At5g03470 - mips_06_07_03 "AtB'alpha regulatory subunit of PP2A"
mips_25_05_13
mips_33_03_13
mips_35_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_62_01_07
at_At5g19820 - mips_08_01 "unknown protein"
mips_25_05_10
mips_40_10_05
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_02
at_At5g65280 - mips_10_01_05 "G protein-coupled receptor-like protein"
mips_10_01_05_05
mips_47_03_15
mips_47_03_15_07
Propertest Accuracy: 5/9 (55.56%)
Propertest Frequency class 'mips_01_20_35_01': 98/2441 (4.01%)
New (unknown) data (1468 items):
at_At1g02420 - no entry null
at_At1g03560 - mips_04_05_99 "hypothetical protein"
at_At1g05750 - no entry null
at_At1g06270 - mips_04_05_99 "unknown protein"
at_At1g07590 - no entry null
at_At1g09680 - no entry null
at_At1g09900 - mips_04_05_99 "hypothetical protein"
at_At1g10820 - no entry null
at_At1g10910 - mips_04_05_99 "membrane-associated salt-inducible protein isolog"
at_At1g11630 - mips_04_05 "putative membrane-associated salt-inducible protein"
mips_04_05_99
at_At1g12300 - mips_04_05_99 "hypothetical protein"
at_At1g12620 - mips_04_05_99 "putative protein"
at_At1g15480 - mips_02_30 "hypothetical protein"
mips_04_05_99
at_At1g15510 - no entry null
at_At1g20230 - no entry null
at_At1g22960 - mips_04_05_99 "putative salt-inducible protein"
at_At1g23450 - no entry null
at_At1g25420 - no entry null
at_At1g26460 - no entry null
at_At1g26500 - mips_04_05_99 "hypothetical protein"
at_At1g28690 - mips_02_30 "hypothetical protein"
mips_08_99
at_At1g31840 - mips_04_05_99 "hypothetical protein"
at_At1g32350 - no entry null
at_At1g33940 - no entry null
at_At1g43800 - mips_01_06_01 "stearoyl acyl carrier protein desaturase, putative"
mips_40_26
mips_40_26_03
at_At1g43980 - mips_02_30 "hypothetical protein"
mips_08_99
at_At1g50270 - mips_02_30 "hypothetical protein"
at_At1g53600 - no entry null
at_At1g60070 - mips_08_07_07 "hypothetical protein"
mips_30_09
mips_40_09
at_At1g63070 - no entry null
at_At1g63130 - mips_04_05_99 "unknown protein"
at_At1g64100 - no entry null
at_At1g64580 - no entry null
at_At1g69290 - mips_04_05_99 "putative protein"
at_At1g71210 - no entry null
at_At1g71490 - mips_02_30 "unknown protein"
mips_08_99
at_At1g80150 - mips_04_05_99 ""
at_At1g80880 - mips_06_01 "hypothetical protein"
at_At2g01360 - no entry null
at_At2g01510 - no entry null
at_At2g02980 - no entry null
at_At2g16880 - mips_04_05_99 "putative salt-inducible protein"
at_At2g17140 - no entry null
at_At2g17670 - no entry null
at_At2g19280 - mips_04_05_99 "putative salt-inducible protein"
at_At2g20540 - mips_99 "unknown protein"
at_At2g22070 - no entry null
at_At2g22410 - no entry null
at_At2g26780 - no entry null
at_At2g33680 - mips_02_30 "hypothetical protein"
at_At2g34400 - mips_02_30 "hypothetical protein"
mips_08_99
at_At2g35130 - no entry null
at_At2g36240 - no entry null
at_At2g39230 - no entry null
at_At2g39620 - mips_02_30 "hypothetical protein"
mips_08_99
at_At2g41720 - mips_04_05_99 "putative salt-inducible protein"
at_At2g48000 - mips_04_05_99 "hypothetical protein"
at_At3g07290 - mips_04_05_99 "hypothetical protein"
at_At3g08820 - no entry null
at_At3g09040 - mips_02_30 "hypothetical protein"
mips_08_99
at_At3g09700 - mips_08_99 "unknown protein"
mips_11_01_05
at_At3g11460 - no entry null
at_At3g13330 - no entry null
at_At3g15590 - no entry null
at_At3g15930 - no entry null
at_At3g16890 - mips_04_05_99 "hypothetical protein"
at_At3g17370 - no entry null
at_At3g18020 - mips_04_05_99 "hypothetical protein"
at_At3g18110 - no entry null
at_At3g18840 - no entry null
at_At3g18970 - mips_30_26 "hypothetical protein"
mips_30_26_03
at_At3g20800 - mips_25_05_23 "putative cell differentiation protein"
at_At3g22360 - no entry null
at_At3g22470 - mips_04_05_99 "hypothetical protein"
at_At3g22690 - no entry null
at_At3g22990 - no entry null
at_At3g29200 - mips_01_20_15 "chorismate mutase"
at_At3g42570 - mips_11_07_99 "putative protein"
at_At3g47530 - no entry null
at_At3g47840 - mips_02 "putative protein"
mips_02_30
mips_08
mips_08_99
mips_99
at_At3g49710 - no entry null
at_At3g51310 - mips_08_13 "vacuolar sorting protein 35 homolog"
mips_30_07
mips_40_22
mips_40_25
at_At3g53360 - mips_02 "putative protein"
mips_02_30
mips_08
mips_08_99
mips_99
at_At3g54980 - mips_02_30 "putative protein"
mips_04_05_99
at_At3g57430 - no entry null
at_At3g61360 - no entry null
at_At3g61520 - no entry null
at_At4g01400 - no entry null
at_At4g04790 - mips_04_05 "hypothetical protein"
mips_04_05_99
at_At4g13650 - no entry null
at_At4g14820 - no entry null
at_At4g18750 - no entry null
at_At4g19220 - mips_02 "putative protein"
mips_02_30
mips_08
mips_08_99
mips_99
at_At4g19440 - mips_04_05_99 "putative protein"
at_At4g20090 - mips_04_05_99 "membrane-associated salt-inducible-like protein"
at_At4g21170 - no entry null
at_At4g21880 - mips_04 "putative protein"
mips_04_05
mips_04_05_99
at_At4g22760 - no entry null
at_At4g26680 - no entry null
at_At4g28010 - mips_04_05_99 "putative protein"
at_At4g31850 - no entry null
at_At4g32050 - no entry null
at_At4g35130 - no entry null
at_At4g37170 - no entry null
at_At5g03030 - mips_06_01 "DNAJ protein - like"
mips_08_99
mips_11_01_05
mips_40_07
at_At5g07450 - mips_01_04_04 "putative protein"
mips_01_05_04
mips_02_19
at_At5g08510 - no entry null
at_At5g09950 - no entry null
at_At5g11310 - mips_04_05_99 "putative protein"
at_At5g14080 - mips_04_05_99 "putative protein"
at_At5g15280 - no entry null
at_At5g16640 - no entry null
at_At5g17620 - no entry null
at_At5g19020 - mips_02_30 "putative protein"
mips_08_99
at_At5g25630 - mips_04_05_99 "putative protein"
at_At5g27270 - mips_05_07 "putative protein"
at_At5g27520 - no entry null
at_At5g28380 - no entry null
at_At5g28460 - mips_04_05_99 "putative protein"
at_At5g37430 - no entry null
at_At5g37470 - no entry null
at_At5g42310 - mips_04_05_99 "maize crp1 protein-like"
at_At5g44090 - mips_03_01 "protein phosphatase 2A 62 kDa B'' regulatory subunit (gb|AAD45158.1)"
mips_03_01_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_10_05
mips_13_11
mips_13_11_03
mips_25_01
mips_25_01_01
mips_40_02
mips_63_17
mips_63_17_01
at_At5g46460 - no entry null
at_At5g46580 - mips_04_05_99 "putative protein"
at_At5g48910 - no entry null
at_At5g52350 - mips_08_16 "putative protein"
mips_13_03
mips_13_03_01
mips_40_04_03
at_At5g52850 - no entry null
at_At5g55740 - mips_02_30 "selenium-binding protein-like"
mips_08_99
at_At5g59900 - mips_04_05 "putative protein"
mips_04_05_99
at_At5g61400 - mips_04_05_99 "putative protein"
at_At5g61650 - mips_02 "PREG-like - like protein"
mips_01_04
mips_01_04_04
mips_01_05_04
mips_02_19
mips_03_03
mips_03_03_01
at_At5g62600 - mips_04_07 "putative protein"
mips_04_09
mips_08_01
mips_40_10_05
at_At5g64210 - mips_40 "alternative oxidase 2 (sp|O22049)"
mips_40_16
at_At5g66520 - no entry null
------------------
Rule 277
ss(_1,_3,c,_2),beta_dist(_1,19.41-29.93) = 1
ss(_1,_3,b,_2),alpha_dist(_1,33.33-45.54),c_len(_2,1.0-3.0),b_len(_3,3.0-6.0) = 0
ss(_1,_3,a,_2),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_4,a,_5),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3),ss(_1,_5,c,_6),notequal(_6,_4),notequal(_6,_5),notequal(_6,_2),notequal(_6,_3) = 0
eval(_1,_2,0.0-9.0e-25),species(_2,mycobacterium_tuberculosis),keyword(_2,hypothetical_protein) = 1
scop_e <= 0.0018
-> class mips_01_20_35_01 "biosynthesis of phenylpropanoids"
Evaluation on training data (2913 items):
at_At1g20490 mips_01_05_01_01_03 "hypothetical protein"
mips_01_06_01
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_30_01
mips_40_19
at_At1g20500 mips_01_05_01_01_03 "hypothetical protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
at_At1g20560 mips_01_06_01_01 "unknown protein (At1g20560)"
mips_01_06_04
mips_01_06_07
mips_01_20_35_01
mips_02_25
mips_67_13
at_At1g21530 mips_02 "amp-binding protein, putative"
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_01_20_37
mips_01_20_37_03
mips_02_25
mips_11
mips_11_05
mips_11_05_03
at_At1g21540 mips_01_05_01_01_03 "amp-binding protein, putative"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_02_16
mips_02_16_13
mips_02_25
at_At1g51680 mips_01_06_01_01 "4-coumarate--coenzyme A ligase (At4CL1)"
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_67_13
at_At1g65880 mips_01_06_01 ""
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_02_99
mips_30_01
at_At1g66120 mips_01_06_01_01 "hypothetical protein"
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_25
at_At1g68270 mips_02 "putative amp-binding protein"
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_02_25
at_At1g75960 mips_01_05_01_01_03 "AMP-binding protein, putative"
mips_01_06_01
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At1g76290 - mips_01_05_01_01_03 "putative AMP-binding protein"
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_40_19
at_At1g77240 mips_01_05_01_01_03 "hypothetical protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At3g16910 mips_01_06_01 "AMP-binding protein, putative"
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_06_99
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_20_03
mips_40_27
mips_40_27_99
at_At3g23790 mips_01_06_01_01 "AMP-binding protein, putative"
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_05
mips_01_20_05_11
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_01_20_37
mips_01_20_37_03
mips_02_25
at_At4g19010 mips_01_05_01_01_03 "4-coumarate-CoA ligase - like"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_10
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_30_01
mips_40_19
at_At5g16340 mips_01_05_01_01 "AMP-binding protein"
mips_01_05_01_01_03
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
Training Accuracy: 15/16 (93.75%)
Training Frequency class 'mips_01_20_35_01': 134/2913 (4.60%)
Evaluation on validation data (1468 items):
at_At1g20480 mips_01_05 "hypothetical protein"
mips_01_05_01_01
mips_01_05_01_01_03
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At1g65060 mips_01_05_01_01_03 "4-coumarate:CoA ligase 3 (4CL3)"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At5g63380 mips_01_05_01_01_03 "4-coumarate-CoA ligase-like protein"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
Validation Accuracy: 3/3 (100.00%)
Validation Frequency class 'mips_01_20_35_01': 57/1468 (3.88%)
Evaluation on propertest data (2441 items):
at_At1g20510 - mips_01_05_01_01_03 "putative 4-coumarate:CoA ligase"
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_16
mips_02_16_13
mips_02_25
at_At1g30520 mips_01_05_01_01_03 "unknown protein (At1g30520)"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_02_99
mips_30_01
mips_40_19
at_At1g62940 mips_01_06_01_01 "4-coumarate:coenzyme A ligase, putative"
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_25
mips_67_13
at_At1g64400 - mips_01_06_01 "putative acyl-CoA synthetase"
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_06_99
mips_20_03
mips_40_19
mips_40_27
mips_40_27_99
at_At1g65890 mips_01_06_01_01 "putative protein"
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_25
at_At2g17650 mips_01_06_01_01 "putative acyl-CoA synthetase"
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_01_20_05
mips_01_20_05_11
mips_01_20_35_01
mips_02_25
at_At3g21230 mips_02 "putative 4-coumarate:CoA ligase 2"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_03
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At3g21240 mips_01_05_01_01_03 "putative 4-coumarate:CoA ligase 2"
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
at_At3g48990 mips_01_05_01_01 "4-coumarate-CoA ligase -like protein"
mips_01_05_01_01_03
mips_01_06
mips_01_06_01
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_02_16
mips_02_16_13
mips_02_25
at_At5g16370 mips_01_05_01_01_03 "AMP-binding protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_07_01
mips_01_20_15
mips_01_20_15_03
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
at_At5g23050 - mips_01_05_01_01_03 "acetyl-CoA synthetase-like protein"
mips_01_06_01
mips_01_06_01_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_16
mips_02_16_13
mips_02_99
mips_30_01
mips_40_19
at_At5g38120 mips_01_05_01_01_03 "4-coumarate--CoA ligase -like protein"
mips_01_06_01_01
mips_01_06_04
mips_01_06_07
mips_01_20_35
mips_01_20_35_01
mips_02_16
mips_02_16_13
mips_02_25
mips_67_13
Propertest Accuracy: 9/12 (75.00%)
Propertest Frequency class 'mips_01_20_35_01': 98/2441 (4.01%)
New (unknown) data (1468 items):
at_At1g06560 - mips_03_01_03 "unknown protein"
mips_04_01
mips_04_01_04
mips_04_03
mips_04_03_06
mips_40_10_07
at_At4g05160 - no entry null
at_At4g23160 - mips_29 "putative protein"
mips_29_01
mips_29_99
mips_99
------------------
Rule 298
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),fprintscan(_orf_0,_fprintscan_id_3,_ipr_2) = 0
eval(_1,_2,0.0-9.0e-25),db_ref(_2,hssp),desc(_2,in) = 1
eval(_1,_2,0.0-9.0e-25),sq_len(_2,667.0-1005.0),classification(_2,arthropoda) = 0
scop_e <= 0.0018
-> class mips_03_01_05_03 "DNA recombination"
Evaluation on training data (2913 items):
at_At1g20390 mips_03_01_05_03 "hypothetical protein"
mips_29_01
at_At2g06170 mips_03_01_05_03 "putative Ty3-gypsy-like retroelement pol polyprotein"
at_At2g06470 mips_03_01_05_03 "putative retroelement pol polyprotein"
mips_29_01
at_At2g06890 mips_03_01 "putative retroelement integrase"
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
mips_29_01
at_At2g07660 mips_03 "putative retroelement pol polyprotein"
mips_03_01
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
mips_29_01
mips_63_03
at_At2g10690 mips_03_01_05_03 "putative retroelement pol polyprotein"
at_At2g11680 mips_03_01 "putative retroelement pol polyprotein"
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_06_13
mips_29
mips_29_01
at_At2g14040 mips_03_01_05_03 "putative retroelement pol polyprotein"
mips_29_01
at_At2g14640 mips_03_01_05_03 "putative retroelement pol polyprotein"
mips_29_01
at_At3g13170 mips_03_01_05_03 "topoisomerase VIA (SPO11 gene 1), putative"
mips_03_01_05_03_01
mips_03_03_02
mips_25_05_25
at_At3g30800 mips_03 "hypothetical protein"
mips_03_01
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_06
mips_06_13
mips_29
at_At4g04230 mips_03_01_05_03 "putative transposon protein"
mips_29_01
at_At4g07600 mips_03_01 ""
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
mips_29_01
at_At4g07850 mips_03_01_03 "putative polyprotein"
mips_03_01_05
mips_03_01_05_03
mips_29_01
at_At5g02820 mips_03_01_05_03 "meiosis specific - like protein"
mips_03_01_05_03_01
mips_03_03_02
Training Accuracy: 15/15 (100.00%)
Training Frequency class 'mips_03_01_05_03': 63/2913 (2.16%)
Evaluation on validation data (1468 items):
at_At1g34080 mips_03_01_05_03 "putative protein"
mips_29_01
at_At1g36590 mips_03_01 "hypothetical protein"
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
at_At1g63990 mips_03_01_05_03 "hypothetical protein"
mips_03_01_05_03_01
mips_03_03_02
mips_25_05_25
at_At1g68990 - mips_03_01 "DNA-directed RNA polymerase"
mips_03_01_03
mips_04_05_01_01
mips_40_16
mips_40_26
mips_40_26_03
at_At2g04670 mips_03_01 "putative retroelement pol polyprotein"
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
mips_29_01
at_At2g05610 mips_03_01 "putative retroelement pol polyprotein"
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
mips_29_01
at_At2g14400 mips_03_01_05_03 "putative retroelement pol polyprotein"
at_At4g03800 mips_03_01_03 ""
mips_03_01_05
mips_03_01_05_03
mips_29_01
at_At5g63990 - mips_01_02 "3'(2'),5'-bisphosphate nucleotidase"
mips_01_02_01
mips_01_03_01
mips_01_04_99
mips_01_05_01_01
mips_01_05_01_01_01
mips_10_01_09
mips_10_01_09_11
Validation Accuracy: 7/9 (77.78%)
Validation Frequency class 'mips_03_01_05_03': 36/1468 (2.45%)
Evaluation on propertest data (2441 items):
at_At1g35370 mips_03_01_05_03 "hypothetical protein"
mips_29_01
at_At1g37060 mips_03_01_05_03 "Athila retroelment ORF 1, putative"
at_At2g14380 mips_03_01_05_03 "putative retroelement pol polyprotein"
mips_29_01
at_At2g14650 mips_03_01_05_03 "putative retroelement pol polyprotein"
at_At2g15410 mips_03_01_05_03 "putative retroelement pol polyprotein"
at_At3g11970 mips_03_01_05 "hypothetical protein"
mips_03_01_05_03
mips_29_01
at_At3g57660 - mips_04_01 "DNA-directed RNA polymerase I 190K chain - like protein"
mips_04_01_01
mips_04_05_01_01
mips_40_10_07
at_At4g03650 mips_03_01_03 "putative reverse transcriptase"
mips_03_01_05
mips_03_01_05_03
mips_29_01
at_At4g08100 mips_03_01 "putative polyprotein"
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
mips_29_01
at_At4g10580 mips_03_01_05_03 "putative reverse-transcriptase -like protein"
mips_29_01
at_At5g15700 - mips_04_05_01_01 "DNA-directed RNA polymerase (mitochondrial)"
mips_40_26
mips_40_26_03
at_At5g45140 - mips_04_01 "DNA-directed RNA polymerase subunit"
mips_04_01_01
mips_04_05_01_01
at_At5g63960 - mips_03_01_05_01 "DNA polymerase III catalytic subunit"
at_At5g67100 - mips_03_01_05_01 "DNA polymerase alpha 1"
Propertest Accuracy: 9/14 (64.29%)
Propertest Frequency class 'mips_03_01_05_03': 55/2441 (2.25%)
New (unknown) data (1468 items):
at_At1g31210 - no entry null
at_At1g36620 - mips_29_01 "hypothetical protein"
mips_29_99
at_At1g37110 - mips_29_01 ""
mips_29_99
at_At1g48710 - mips_29 "hypothetical protein"
mips_29_02
at_At1g53810 - mips_29_01 ""
mips_29_99
at_At1g57640 - mips_29_01 ""
mips_29_99
at_At1g58140 - mips_29_01 "hypothetical protein"
mips_29_02
at_At1g60020 - mips_29 "hypothetical protein"
at_At1g70010 - mips_29_01 "hypothetical protein"
mips_29_99
at_At2g04490 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_99
at_At2g07550 - no entry null
at_At2g13930 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_99
at_At2g13940 - mips_29 "putative retroelement pol polyprotein"
mips_29_01
mips_29_99
at_At2g16000 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_99
at_At2g16670 - mips_10 "putative retroelement pol polyprotein"
mips_10_01
mips_10_01_01
mips_29
mips_29_01
mips_29_99
at_At2g17490 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_02
at_At2g20460 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_99
at_At3g25450 - mips_10_01_01 "hypothetical protein"
mips_29
at_At3g59720 - mips_29_01 "copia-type reverse transcriptase-like protein"
at_At4g03810 - mips_29 "putative retrotransposon protein"
mips_29_02
at_At4g07840 - mips_29_01 "putative transposon protein"
at_At4g21360 - mips_29_01 "putative transposable element"
mips_29_02
mips_29_99
at_At4g22040 - mips_29 "LTR retrotransposon like protein"
mips_29_01
mips_29_02
mips_29_99
at_At4g32220 - mips_29 "hypothetical protein"
at_At5g16850 - mips_03_01 "telomerase reverse transcriptase"
mips_03_01_03
mips_03_99
mips_13_11
mips_30_10
mips_30_10_03
mips_40_10_03
------------------
Rule 905
profscan(_orf_0,_profscan_id_1,_ipr_2),blastprodom(_orf_0,_blastprodom_id_3,_ipr_2) = 0
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
ss(_1,_3,a,_2),c_len(_2,15.0-30.0),a_len(_3,11.0-15.0) = 0
ss(_1,_3,c,_2),c_len(_3,6.0-9.0),ss(_1,_5,a,_4),notequal(_5,_3),notequal(_5,_2),notequal(_4,_3),notequal(_4,_2),c_len(_4,6.0-9.0) = 1
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,0.0-5.15),a_len(_4,15.0-30.0) = 0
seq_wq5_ratio <= 0.065
seq_wm9_ratio <= 0.15
ss(_1,_3,c,_2),alpha_dist(_1,45.54-101.0),c_len(_3,15.0-30.0) = 0
ss(_1,_3,c,_2),c_len(_3,11.0-15.0),ss(_1,_2,a,_4),notequal(_4,_3),notequal(_4,_2),coil_dist(_1,41.76-48.08) = 0
ss(_1,_3,a,_2),c_len(_2,9.0-11.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),b_len(_4,3.0-6.0) = 0
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 0
seq_iw5_ratio <= 0.046
-> class mips_06_13_01_01 "proteasomal degradation"
Evaluation on training data (2913 items):
at_At1g13060 mips_03_03_02 "proteasome epsilon chain precursor"
mips_06_13_01
mips_06_13_01_01
mips_14_04_03
mips_14_04_03_05
mips_20_25_16
mips_20_25_16_03
mips_20_25_16_03_05
at_At1g16470 mips_04_05 "20S proteasome subunit PAB1"
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_01
mips_06_13
mips_06_13_01
mips_06_13_01_01
mips_40_03
mips_63_01
at_At1g47250 mips_04_05_01_04_01 "20S proteasome subunit PAF2"
mips_06_13
mips_06_13_01
mips_06_13_01_01
at_At1g53850 mips_03_03_02 "unknown protein"
mips_06_13_01
mips_06_13_01_01
mips_11_99
mips_14_04_03
mips_14_04_03_05
mips_40_07
at_At1g77440 mips_03_03_02 "putative 20S proteasome beta subunit PBC2"
mips_06_13_01
mips_06_13_01_01
mips_14_04_03
mips_14_04_03_05
mips_20_25_16
mips_20_25_16_03
mips_20_25_16_03_05
at_At2g27020 mips_06_13_01 "20S proteasome subunit C8 (PAG1/PRC8_ARATH)"
mips_06_13_01_01
mips_14_04_03
mips_14_04_03_05
at_At3g14290 mips_03_03_02 "20S proteasome subunit PAE2"
mips_06_13_01
mips_06_13_01_01
mips_11_99
mips_14_04_03
mips_14_04_03_05
at_At3g22110 mips_06_13_01 "20S proteasome subunit PAC1"
mips_06_13_01_01
mips_30_04
mips_40_07
at_At3g26340 mips_03 "26S proteasome beta subunit like protein"
mips_03_03
mips_03_03_01
mips_03_03_02
mips_06
mips_06_07
mips_06_13
mips_06_13_01
mips_06_13_01_01
mips_14
mips_14_04
mips_20
mips_14_04_03
mips_14_04_03_05
mips_20_25
mips_20_25_16
mips_20_25_16_03
mips_20_25_16_03_05
mips_40_03
mips_40_07
mips_63
mips_63_01
at_At3g27430 mips_06_13_01 "20S proteasome beta subunit (PBB1)"
mips_06_13_01_01
mips_20_25_16
mips_30_03
at_At3g60820 mips_03_03_02 "proteasome component C5"
mips_06_13_01
mips_06_13_01_01
mips_14_04_03_05
mips_20_25_16_03
mips_20_25_16_03_05
at_At4g14800 mips_03_03_02 "proteasome chain protein"
mips_06_13_01
mips_06_13_01_01
mips_14_04_03
mips_14_04_03_05
mips_20_25
mips_20_25_16
mips_20_25_16_03
mips_20_25_16_03_05
mips_40_07
mips_65
at_At4g28470 mips_04_03 "putative protein"
mips_04_03_03
mips_06_07_11
mips_06_13_01
mips_06_13_01_01
at_At4g31300 mips_03_03_02 "multicatalytic endopeptidase complex, proteasome precursor, beta subunit"
mips_06_13_01
mips_06_13_01_01
mips_14_04_03
mips_14_04_03_05
mips_20_25_16
mips_20_25_16_03
mips_20_25_16_03_05
mips_65
at_At5g14360 mips_05 "putative protein"
mips_05_01
mips_05_01_01
mips_05_04
mips_06_07
mips_06_07_07
mips_06_13
mips_06_13_01
mips_06_13_01_01
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
Training Accuracy: 15/15 (100.00%)
Training Frequency class 'mips_06_13_01_01': 52/2913 (1.79%)
Evaluation on validation data (1468 items):
at_At1g21720 mips_03 "putative 20S proteasome beta subunit PBC2"
mips_03_03
mips_03_03_01
mips_03_03_02
mips_06_07
mips_06_13
mips_06_13_01
mips_06_13_01_01
mips_14
mips_14_04
mips_14_04_03
mips_14_04_03_05
mips_40_03
mips_40_07
at_At2g05840 mips_04_05_01_04_01 "20S proteasome subunit (PAA2)"
mips_06_13_01
mips_06_13_01_01
at_At3g22630 mips_03_03_01 "multicatalytic endopeptidase complex, proteasome component, beta subunit"
mips_03_03_02
mips_06_13_01
mips_06_13_01_01
mips_14_04_03
mips_14_04_03_05
mips_20_25_16
mips_20_25_16_03
mips_20_25_16_03_05
mips_63_01
at_At3g59980 - mips_05_10 "unknown protein"
mips_10
mips_10_05_99
mips_13_05
mips_13_11
mips_13_11_03
mips_13_11_03_03
mips_14_04_09
mips_14_04_09_01
mips_14_10
mips_14_10_02
mips_40_27
at_At5g12040 - mips_01_02_01 "unknown protein"
mips_01_20_35
mips_01_20_35_01
at_At5g35590 mips_04_05_01_04_01 "multicatalytic endopeptidase complex alpha subunit-like"
mips_06_13_01
mips_06_13_01_01
at_At5g40580 mips_06_13_01 "20S proteasome beta subunit PBB2"
mips_06_13_01_01
mips_30_03
at_At5g66140 mips_04_05_01_04_01 "20S proteasome subunit PAD2 (gb|AAC32059.1)"
mips_06_13_01
mips_06_13_01_01
Validation Accuracy: 6/8 (75.00%)
Validation Frequency class 'mips_06_13_01_01': 25/1468 (1.70%)
Evaluation on propertest data (2441 items):
at_At1g16590 - mips_03 "putative translesion synthesis polymerase zeta subunit (REV7)"
mips_03_01
mips_03_01_03
mips_03_01_05
mips_03_01_05_01
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_11
mips_03_03_01_03
mips_03_03_04
mips_03_03_04_01
mips_03_03_04_07
mips_40_10_03
mips_63_01
at_At1g79210 mips_04 ""
mips_04_05_01_04_01
mips_05_01
mips_06
mips_06_13
mips_06_13_01
mips_06_13_01_01
mips_40_10
mips_63_01
at_At3g51260 mips_04_05_01_04_01 "multicatalytic endopeptidase complex alpha chain"
mips_06_13_01
mips_06_13_01_01
mips_40_07
at_At4g08790 - mips_01_02 "nitrilase 1 like protein"
mips_01_02_01
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g09340 - mips_03_01_09 "putative protein"
mips_03_01_09_05
mips_04_05_01_04_01
mips_06_07_02
mips_10_01_05_01
mips_14_01_03
mips_14_04_07
mips_30_10
mips_48
mips_62_01
mips_62_01_07
at_At4g39370 - mips_06_13_01 "unknown protein"
mips_13_11_03
mips_13_11_03_13
mips_14_04_03
mips_14_04_03_05
mips_30_25
mips_40_07
at_At5g11900 - mips_14_01_03_99 "unknown protein"
at_At5g54260 - mips_03_01_05_03 "DNA repair and meiosis protein Mre11 (emb|CAB50793.1)"
mips_03_01_05_03_01
mips_03_03_02
at_At5g64370 - mips_01_01_01_15 "beta-ureidopropionase"
mips_01_01_01_15_05
mips_01_02
mips_01_02_01
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_99
mips_20_20
mips_20_20_18
Propertest Accuracy: 2/9 (22.22%)
Propertest Frequency class 'mips_06_13_01_01': 41/2441 (1.68%)
New (unknown) data (1468 items):
at_At1g08820 - mips_01_05_04 "unknown protein"
mips_08_07_27
mips_08_07_99
mips_10_05_99
mips_13_05
mips_40_09
at_At1g20160 - no entry null
at_At1g28650 - mips_01_06 "lipase, putative"
mips_01_06_04
mips_01_20
mips_01_20_13
at_At1g28660 - mips_01_06_04 "unknown protein"
mips_01_20_13
at_At1g28670 - mips_01 "lipase"
mips_01_06
mips_01_06_04
mips_01_20
mips_01_20_13
mips_98
at_At1g29660 - no entry null
at_At1g33810 - no entry null
at_At1g50670 - no entry null
at_At1g51270 - mips_05 "unknown protein"
mips_06
mips_06_04
mips_08
mips_08_07
mips_08_07_27
mips_08_07_99
mips_10
mips_10_01
mips_10_05
mips_10_05_99
mips_13
mips_13_05
mips_40_02
mips_40_09
mips_63
mips_63_07
mips_98
at_At1g54010 - no entry null
at_At1g54020 - no entry null
at_At1g54030 - no entry null
at_At1g54790 - mips_01_20_13 ""
at_At1g56670 - mips_01_06 "lipase homolog (Lip-4)"
mips_01_06_04
mips_01_20
mips_01_20_13
at_At1g58430 - no entry null
at_At1g58480 - no entry null
at_At1g60250 - mips_11_01 ""
at_At1g60410 - no entry null
at_At1g67830 - mips_01_06 "ENOD8-like protein"
mips_01_06_04
mips_01_20
mips_01_20_13
at_At1g71120 - no entry null
at_At1g71200 - mips_20_25 "hypothetical protein"
mips_20_25_16
mips_25_05_15
mips_35
mips_35_03
mips_35_03_12
at_At1g71250 - mips_98 "putative GDSL-motif lipase/acylhydrolase"
at_At1g71691 - no entry null
at_At1g73610 - no entry null
at_At1g75880 - no entry null
at_At1g75910 - no entry null
at_At1g75920 - no entry null
at_At2g03980 - no entry null
at_At2g04020 - no entry null
at_At2g04570 - no entry null
at_At2g07240 - mips_99 "hypothetical protein"
at_At2g07760 - mips_29 "putative Ta11-like non-LTR retroelement protein"
mips_29_02
at_At2g11200 - no entry null
at_At2g19010 - no entry null
at_At2g19050 - no entry null
at_At2g19060 - no entry null
at_At2g19580 - mips_14_20 "putative senescence-associated protein 5"
at_At2g22170 - no entry null
at_At2g23540 - no entry null
at_At2g24560 - no entry null
at_At2g24640 - mips_25_05_13 "putative ubiquitin carboxyl terminal hydrolase"
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At2g27350 - no entry null
at_At2g30220 - no entry null
at_At2g31550 - no entry null
at_At2g32360 - no entry null
at_At2g32770 - mips_01 "putative purple acid phosphatase precursor"
mips_06
mips_06_07
mips_10
mips_10_01
mips_10_01_01
mips_40
mips_98
mips_99
at_At2g39130 - mips_01_01_07 "unknown protein"
mips_67_10
mips_67_12
mips_67_50_03
at_At2g40250 - no entry null
at_At2g42990 - no entry null
at_At2g43560 - no entry null
at_At2g45140 - mips_08_07 "putative VAMP-associated protein"
mips_08_07_27
mips_08_07_99
mips_10_05_99
mips_13_05
mips_40_09
mips_63_07
at_At3g07130 - no entry null
at_At3g09930 - no entry null
at_At3g10060 - mips_06_01 "unknown protein"
at_At3g12340 - mips_01_05 "hypothetical protein"
mips_06_01
mips_10_01
mips_10_01_99
at_At3g14210 - no entry null
at_At3g14220 - no entry null
at_At3g14820 - no entry null
at_At3g23620 - no entry null
at_At3g24070 - mips_29_01 "putative retroelement"
at_At3g24210 - no entry null
at_At3g25220 - mips_06_01 "immunophilin (FKBP15-1)"
mips_40_07
at_At3g26430 - mips_01_20_13 "nodulin, putative"
at_At3g29500 - no entry null
at_At3g44080 - no entry null
at_At3g44300 - mips_01_02 "nitrilase 2"
mips_20_20
mips_20_20_18
at_At3g44310 - mips_01_02 "nitrilase 1"
mips_20
mips_20_20
mips_20_20_18
at_At3g44320 - mips_01_02 "nitrilase 3"
mips_20_20
mips_20_20_18
at_At3g47880 - no entry null
at_At3g50400 - no entry null
at_At3g52820 - no entry null
at_At3g53100 - no entry null
at_At3g53820 - no entry null
at_At3g54830 - mips_01_01_07 "putative protein"
mips_08_19
mips_20_03
mips_67_10
mips_67_12
at_At3g55540 - no entry null
at_At3g57810 - no entry null
at_At3g60600 - mips_08_07_27 "putative protein"
mips_08_07_99
mips_10_05_99
mips_13_05
mips_40_09
at_At3g60790 - no entry null
at_At4g01130 - mips_01_20_13 "putative acetyltransferase"
at_At4g04530 - no entry null
at_At4g08340 - no entry null
at_At4g16230 - no entry null
at_At4g21630 - no entry null
at_At4g21640 - mips_06_13 "subtilisin-like protease"
at_At4g23960 - no entry null
at_At4g24890 - no entry null
at_At4g25410 - no entry null
at_At4g25610 - no entry null
at_At4g26790 - no entry null
at_At4g28220 - mips_02_08 "putative NADH dehydrogenase"
mips_02_11
mips_02_13
mips_67_15
at_At4g28780 - no entry null
at_At4g30140 - no entry null
at_At4g30890 - mips_06_13_01 "ubiquitin-specific protease 24 (UBP24)"
at_At4g39910 - no entry null
at_At5g02170 - mips_01_01_07 "putative protein"
mips_48
mips_67_10
mips_67_12
at_At5g02920 - no entry null
at_At5g03600 - no entry null
at_At5g03610 - no entry null
at_At5g03620 - mips_06_13 "cucumisin precursor -like protein"
at_At5g03810 - no entry null
at_At5g03980 - mips_01 "lipase -like protein"
mips_01_06
mips_01_06_04
mips_98
mips_99
at_At5g08460 - no entry null
at_At5g11580 - mips_06_07 "unknown protein"
mips_06_13
at_At5g11940 - no entry null
at_At5g13410 - mips_05 "putative protein"
mips_06_01
mips_06_04
mips_10_01_99
at_At5g22300 - mips_01_02 "Nitrilase 4 (sp|P46011)"
mips_20_20
mips_20_20_18
at_At5g27880 - no entry null
at_At5g28250 - no entry null
at_At5g28830 - no entry null
at_At5g33250 - no entry null
at_At5g33370 - no entry null
at_At5g34850 - no entry null
at_At5g34990 - no entry null
at_At5g39480 - no entry null
at_At5g39490 - no entry null
at_At5g41890 - no entry null
at_At5g42170 - no entry null
at_At5g42640 - no entry null
at_At5g44530 - no entry null
at_At5g45290 - mips_25_03 "unknown protein"
at_At5g45670 - no entry null
at_At5g45960 - no entry null
at_At5g47180 - mips_08_07 "VAMP (vesicle-associated membrane protein)-associated protein-like"
mips_08_07_27
mips_08_07_99
mips_10_05_99
mips_13_05
mips_40_09
mips_63_07
at_At5g48580 - mips_05 "peptidyl-prolyl cis-trans isomerase-like protein"
mips_06_01
mips_06_04
mips_40_07
at_At5g50400 - no entry null
at_At5g51750 - no entry null
at_At5g51790 - no entry null
at_At5g52120 - mips_06_99 "putative protein"
at_At5g54110 - mips_06_10 "membrane associated protein"
mips_08_07
mips_08_07_27
mips_08_07_99
mips_10_05_99
mips_13_05
mips_40_09
mips_63_07
at_At5g57990 - mips_03 "ubiquitin-specific protease 23 (UBP23)"
mips_06_07
mips_06_13
at_At5g60220 - mips_14_20 "senescence-associated protein - like"
mips_25_03
at_At5g65450 - no entry null
at_At5g65990 - mips_01_01 "amino acid transporter protein-like"
mips_01_01_07
mips_13_03
mips_13_03_01
mips_67_10
mips_67_12
mips_67_50
mips_67_50_03
------------------
Rule 1455
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_3,_ipr_2),fprintscan(_orf_0,_fprintscan_id_4,_ipr_2) = 1
ss(_1,_3,b,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,11.94-19.41),a_len(_4,6.0-9.0) = 1
ss(_1,_3,b,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_4,b,_5),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3),ss(_1,_5,c,_6),notequal(_6,_4),notequal(_6,_5),notequal(_6,_2),notequal(_6,_3) = 1
-> class mips_06_13_04_01 "lysosomal degradation"
Evaluation on training data (2913 items):
at_At1g06260 mips_06_07_11 "cysteine proteinase, putative"
mips_06_13
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
at_At3g49340 mips_06_07_11 "cysteine protease - like protein"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_40_25
at_At4g01620 mips_06_07_11 "cathepsin B-like cysteine protease"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_30_25
mips_40_25
mips_43
mips_43_03
mips_62_01
mips_62_01_05
at_At4g39090 mips_02_99 "drought-inducible cysteine proteinase RD19A precursor"
mips_06_07_11
mips_06_13
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_08_13
mips_40_25
at_At5g43060 mips_06_07_11 "cysteine protease component of protease-inhibitor complex"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_40_25
Training Accuracy: 5/5 (100.00%)
Training Frequency class 'mips_06_13_04_01': 24/2913 (0.82%)
Evaluation on validation data (1468 items):
at_At1g31930 - mips_10_01_05 "hypothetical protein"
mips_10_01_05_05
mips_10_01_05_05_03
mips_13
mips_13_11
mips_13_11_03
mips_62_02_01_02
mips_63_19
at_At2g27420 mips_06_07_11 "putative cysteine proteinase"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_40_25
at_At3g45310 mips_06_07_11 "cysteine protease-like protein"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_08_13
mips_40_25
at_At5g45890 mips_06_07_11 "senescence-specific cysteine protease"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_40_25
Validation Accuracy: 3/4 (75.00%)
Validation Frequency class 'mips_06_13_04_01': 12/1468 (0.82%)
Evaluation on propertest data (2441 items):
at_At1g26480 - mips_13_01_01 "14-3-3 protein epsilon, putative"
mips_13_01_01_01
mips_13_11_03
mips_13_11_03_05
mips_20_25_01
mips_20_25_07
mips_20_25_07_03
mips_20_25_07_99
mips_43
mips_43_03
mips_43_03_13
mips_43_03_99
mips_62_01_01
mips_62_01_07
mips_62_02_07
mips_63_02
mips_63_13
mips_63_13_03
mips_63_17_01
at_At1g29090 mips_06_07_11 "cysteine proteinase, putative"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_40_25
at_At2g26300 - mips_10_01_05 "G protein alpha subunit 1 (GPA1)"
mips_10_01_05_05
mips_10_01_05_05_03
mips_10_05_02
mips_10_05_02_24
mips_13_05
mips_25_05_13
mips_33_03_13
mips_62_02
mips_62_02_01
mips_62_02_01_02
at_At3g48340 mips_06_07_11 "cysteine endopeptidase - like protein"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_40_25
at_At5g60360 mips_06_07_11 "AALP protein"
mips_06_10
mips_06_13_04
mips_06_13_04_01
mips_08_13
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_02
Propertest Accuracy: 3/5 (60.00%)
Propertest Frequency class 'mips_06_13_04_01': 28/2441 (1.15%)
New (unknown) data (1468 items):
at_At1g09850 - mips_06_13_04 "papain-like cysteine peptidase XBCP3"
mips_06_13_99
at_At1g10430 - mips_40_04_05 "serine/threonine protein phosphatase, PP2A, catalytic subunit"
at_At1g50370 - mips_40_04_05 "phosphoprotein phosphatase"
at_At1g59830 - mips_06_07_03 "unknown protein"
mips_30_04
mips_40_04_05
mips_63_17_09
at_At1g64040 - mips_02 "phosphoprotein phosphatase 1"
mips_01_04
mips_03_03
mips_06_07
at_At1g69960 - mips_06_07_03 "serine/threonine protein phosphatase (type 2A)"
mips_40_04_05
at_At2g28550 - no entry null
at_At2g29400 - mips_01_04 "phosphoprotein phosphatase, type 1 catalytic subunit"
at_At2g31230 - mips_25_03 "ethylene reponse factor-like AP2 domain transcription factor"
at_At2g39840 - no entry null
at_At3g19390 - mips_06_13_99 "putative cysteine proteinase RD21A precursor"
mips_40_25
at_At3g19400 - mips_06_13_99 "putative cysteine proteinase RD21A precursor"
mips_20_25_16
at_At3g43960 - mips_02_99 "cysteine proteinase - like predicted GPI-anchored protein"
mips_06_13_99
at_At3g46820 - no entry null
at_At3g48350 - mips_06_13 "cysteine endopeptidase precursor - like protein"
mips_06_13_99
mips_40_25
at_At3g54940 - mips_02_99 "cysteine proteinase precursor-like protein"
mips_06_10
mips_06_13_04
mips_06_13_99
at_At4g11240 - no entry null
at_At4g11310 - mips_06_10 "cysteine proteinase-like protein"
mips_06_13
mips_06_13_99
at_At4g11320 - mips_06_13_99 "cysteine proteinase like protein"
mips_08_13
mips_40_25
at_At4g13980 - no entry null
at_At4g23520 - mips_06_13_99 "cysteine proteinase - like protein"
at_At4g26720 - mips_03_03_01 "phosphoprotein phosphatase (PPX-1)"
mips_06
mips_10
mips_10_01_01
mips_40_04
mips_40_04_05
mips_40_10
mips_63_17_09
at_At5g10900 - no entry null
at_At5g27840 - no entry null
at_At5g43380 - no entry null
at_At5g47220 - no entry null
at_At5g50260 - mips_06 "cysteine endopeptidase"
mips_06_13
mips_06_13_99
mips_40
mips_40_25
mips_98
at_At5g55260 - mips_01 "protein phosphatase X isoform 2 (gb|AAB86419.1)"
mips_01_04
mips_06
mips_06_07
mips_10
mips_10_01
mips_10_01_01
mips_30
mips_30_04
mips_40_03
mips_40_04
mips_40_04_05
mips_40_10
mips_63
mips_63_03
mips_63_17
mips_63_17_09
at_At5g59160 - no entry null
at_At5g63870 - mips_01_05_04 "ser/thr protein phosphatase catalytic subunit-like protein"
------------------
Rule 835
ss(_1,_3,b,_2),b_len(_3,3.0-6.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),b_len(_4,3.0-6.0) = 1
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2) = 0
seq_wn2_ratio <= 0.105
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 0
ss(_1,_3,c,_2),c_len(_3,3.0-6.0),ss(_1,_2,a,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,11.0-15.0) = 0
ss(_1,_3,c,_2),c_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,0.0-13.03) = 1
scop_b.80 > 2.4e-35
ss(_1,_3,b,_2),b_len(_3,9.0-11.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_6,a,_5),notequal(_6,_2),notequal(_6,_4),notequal(_6,_3),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3) = 1
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),a_len(_4,6.0-9.0) = 0
ss(_1,_3,a,_2),a_len(_3,3.0-6.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),coil_dist(_1,53.24-60.98) = 0
seq_nh5_ratio <= 0.235
seq_wa5_ratio <= 0.323
ss(_1,_3,b,_2),c_len(_2,3.0-6.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),a_len(_4,15.0-30.0) = 0
ss(_1,_3,b,_2),a_len(_2,1.0-3.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3),a_len(_5,6.0-9.0) = 0
ss(_1,_3,a,_2),a_len(_3,6.0-9.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),coil_dist(_1,60.98-101.0) = 0
seq_wk10_ratio <= 0.52
-> class mips_10_01_05_03 "protease mediated signal transduction"
Evaluation on training data (2913 items):
at_At1g01300 mips_06_13_99 "chloroplast nucleoid DNA binding protein, putative"
mips_10_01_05
mips_10_01_05_03
mips_20_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g09750 mips_06_13_99 "unknown protein"
mips_10_01_05_03
mips_20_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g66180 mips_06_13 "unknown protein"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_10_01_05
mips_10_01_05_03
mips_40_25
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g69100 mips_06_13 "hypothetical protein"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_10_01_05
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g77480 mips_04 "nucellin-like protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_06
mips_06_13
mips_06_13_99
mips_10
mips_10_01
mips_10_01_05
mips_10_01_05_03
mips_20
mips_20_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
mips_63
mips_63_01
mips_98
at_At2g28010 mips_06_13 "putative chloroplast nucleoid DNA binding protein"
mips_06_13_99
mips_10_01_05
mips_10_01_05_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
mips_63_01
at_At2g42980 mips_06_13_99 "hypothetical protein"
mips_10_01_05
mips_10_01_05_03
mips_40_25
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At3g50050 mips_06_13_04 "putative protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At3g52500 mips_06 "Unknown protein"
mips_06_13
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_10
mips_10_01
mips_10_01_05
mips_10_01_05_03
mips_20
mips_20_03
mips_40_25
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
mips_63
mips_63_01
mips_98
at_At3g54400 mips_06_13_99 "nucleoid DNA-binding - like protein"
mips_10_01_05
mips_10_01_05_03
mips_20_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At4g22050 mips_06_13_04 "aspartic proteinase like protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g02190 mips_06_13_04 "putative protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g10080 mips_06_07 "predicted GPI-anchored protein"
mips_06_13
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_10_01_05
mips_10_01_05_03
mips_40_25
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g19100 mips_06_13_04 "dermal glycoprotein precursor -like protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g45120 mips_06_13_04 "chloroplast nucleoid DNA-binding protein-like"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g48430 mips_06_13_04 "dermal glycoprotein precursor, extracellular-like"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
mips_63_01
Training Accuracy: 16/16 (100.00%)
Training Frequency class 'mips_10_01_05_03': 24/2913 (0.82%)
Evaluation on validation data (1468 items):
at_At1g03230 mips_06_13 "unknown protein"
mips_06_13_04
mips_06_13_04_01
mips_06_13_99
mips_10_01_05
mips_10_01_05_03
mips_40_25
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At1g76150 - mips_01_01_01 "unknown protein"
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_07
mips_01_06_01_07_11
mips_01_06_07
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_25
mips_40_19
mips_63_13
mips_63_13_99
mips_67_13
at_At3g16550 - mips_06_07_11 "putative serine protease"
mips_06_13_99
mips_10_05_01
mips_10_05_01_12
mips_10_05_01_12_05
mips_14_01_05
mips_14_01_99
mips_14_04_07
mips_14_04_09
mips_14_04_09_99
mips_33_03_17
mips_40_27_99
at_At3g45940 - mips_01_05_01_01_02 "putative protein"
mips_02_01
mips_02_19
mips_40_08
mips_40_25
mips_63_13
mips_63_13_01
at_At3g51340 - mips_06_13_04 "putative protein"
mips_06_13_04_01
mips_20_03
mips_40_25
at_At5g07030 mips_06_13_99 "nucleoid DNA-binding-like protein"
mips_10_01_05_03
mips_20_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g24820 mips_06_13_04 "putative protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
Validation Accuracy: 3/7 (42.86%)
Validation Frequency class 'mips_10_01_05_03': 9/1468 (0.61%)
Evaluation on propertest data (2441 items):
at_At1g03220 - mips_06_13_04 "unknown protein"
mips_06_13_04_01
mips_20_03
mips_40_25
at_At2g03200 - mips_04 "putative chloroplast nucleoid DNA binding protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_06
mips_06_13
mips_20
mips_20_03
mips_98
mips_99
at_At2g18000 - mips_04_05_01_04_01 "unknown protein"
mips_14_04_07
mips_20_25_16
mips_43
mips_43_03
mips_43_03_09
mips_62_01
mips_62_01_07
mips_62_02_01_01
mips_63_03_01
at_At2g20790 - mips_08_07 "unknown protein"
mips_08_07_22
mips_08_07_22_01
mips_13_03
mips_13_03_01
mips_30_08
mips_40_09
mips_45
mips_45_03
mips_45_03_09
at_At2g28040 mips_06_13_04 "putative chloroplast nucleoid DNA binding protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_01
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At3g18490 - mips_04_05 "putative chloroplast nucleoid DNA-binding protein"
mips_04_05_01
mips_04_05_01_04
mips_06_13
mips_20
mips_20_03
mips_40_26
mips_40_26_03
at_At4g30040 - mips_06_13_04 "putative protein"
mips_06_13_04_01
mips_20_03
mips_40_25
at_At4g33490 mips_06_13_04 "nucellin -like protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05
mips_10_01_05_03
mips_20_03
mips_40_25
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g19120 mips_06_13_04 "conglutin gamma - like protein"
mips_06_13_04_01
mips_06_13_99
mips_10_01_05_03
mips_40_25
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_62_02_01_02
mips_62_02_01_02_03
at_At5g43100 - mips_06_13_04 "putative protein"
mips_06_13_04_01
mips_20_03
mips_40_25
at_At5g54080 - mips_01_01 "homogentisate 1,2-dioxygenase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_01_01_10_05_06
Propertest Accuracy: 3/11 (27.27%)
Propertest Frequency class 'mips_10_01_05_03': 15/2441 (0.61%)
New (unknown) data (1468 items):
at_At1g04170 - mips_05_01 "putative translation initiation factor eIF-2, gamma subunit"
mips_05_04_02
mips_14_01_03
mips_40_10_03
at_At1g08470 - mips_01 "unknown protein"
mips_01_20
mips_40
mips_40_01
mips_99
at_At1g10260 - no entry null
at_At1g11810 - no entry null
at_At1g14430 - mips_01_06_01 "hypothetical protein"
at_At1g18070 - mips_05_04_02 "hypothetical protein"
mips_25_05_25
mips_63_19_05
at_At1g19410 - no entry null
at_At1g20240 - no entry null
at_At1g20990 - no entry null
at_At1g23470 - mips_01_20_99 "putative polygalacturonase precursor"
at_At1g26930 - mips_30_04 "unknown protein"
mips_40_04
at_At1g29980 - no entry null
at_At1g30090 - mips_63_07 "putative protein"
at_At1g31080 - no entry null
at_At1g32170 - mips_01_05_99 "endoxyloglucan transferase"
mips_30_01
mips_40_01
at_At1g32980 - no entry null
at_At1g34190 - mips_25_03 "putative protein"
at_At1g44020 - no entry null
at_At1g48550 - mips_06_04 "unknown protein"
mips_08
mips_08_07
mips_08_07_22
mips_08_07_29
mips_08_07_99
mips_08_13
mips_08_99
mips_30_25
mips_40_08
mips_40_22
mips_63_07
at_At1g50120 - no entry null
at_At1g52030 - no entry null
at_At1g52100 - no entry null
at_At1g52110 - no entry null
at_At1g55390 - no entry null
at_At1g55410 - no entry null
at_At1g55420 - mips_04_05 ""
mips_04_05_01
at_At1g57580 - no entry null
at_At1g57790 - no entry null
at_At1g60370 - no entry null
at_At1g61060 - no entry null
at_At1g61230 - mips_11_05_03 ""
at_At1g62340 - no entry null
at_At1g64840 - no entry null
at_At1g66450 - no entry null
at_At1g67160 - no entry null
at_At1g70020 - mips_99 "hypothetical protein"
at_At1g70970 - no entry null
at_At1g72060 - no entry null
at_At1g73180 - mips_05 "unknown protein"
mips_05_04
mips_10_05
mips_40_02
at_At1g78850 - no entry null
at_At1g78860 - no entry null
at_At2g01410 - no entry null
at_At2g02490 - no entry null
at_At2g03460 - no entry null
at_At2g05210 - no entry null
at_At2g12140 - no entry null
at_At2g14290 - no entry null
at_At2g15640 - no entry null
at_At2g16160 - no entry null
at_At2g16290 - no entry null
at_At2g17590 - no entry null
at_At2g17690 - no entry null
at_At2g21680 - no entry null
at_At2g22620 - no entry null
at_At2g26370 - no entry null
at_At2g27510 - mips_67_15 "putative ferredoxin"
at_At2g29860 - no entry null
at_At2g34510 - no entry null
at_At2g36870 - mips_01_05_99 "putative xyloglucan endo-transglycosylase"
mips_30_01
mips_40_01
at_At2g37390 - no entry null
at_At2g38200 - no entry null
at_At2g38220 - no entry null
at_At2g41800 - no entry null
at_At2g41810 - no entry null
at_At2g43260 - no entry null
at_At2g43740 - no entry null
at_At3g08740 - mips_05_04_02 "elongation factor P (EF-P) like protein"
at_At3g11370 - no entry null
at_At3g12000 - no entry null
at_At3g13780 - no entry null
at_At3g18720 - no entry null
at_At3g21490 - mips_67_04 "hypothetical protein"
mips_67_50
mips_67_50_25
at_At3g22730 - no entry null
at_At3g23730 - mips_01_05_99 "xyloglucan endotransglycosylase, putative"
mips_40_01
at_At3g23960 - no entry null
at_At3g24610 - mips_63_07 "hypothetical protein"
at_At3g25750 - no entry null
at_At3g28220 - no entry null
at_At3g30150 - mips_03 "hypothetical protein"
mips_03_01
mips_03_01_03
mips_29
at_At3g42410 - no entry null
at_At3g42760 - no entry null
at_At3g43370 - no entry null
at_At3g44410 - no entry null
at_At3g46260 - no entry null
at_At3g46280 - no entry null
at_At3g46810 - mips_04 "putative protein"
mips_04_05
mips_04_05_01
mips_98
at_At3g47020 - no entry null
at_At3g47230 - mips_01_01_99 "putative protein"
mips_20_20
mips_20_20_18
mips_40_10
at_At3g48620 - mips_06_04 "putative protein"
mips_08_02
mips_40_26
mips_40_26_03
at_At3g51360 - mips_06_13 "putative protein"
at_At3g51440 - mips_40_01 "mucin -like protein"
at_At3g51610 - no entry null
at_At3g51710 - no entry null
at_At3g53950 - mips_01_06 "putative protein"
mips_01_06_01
mips_98
at_At3g56470 - no entry null
at_At3g57030 - mips_40_01 "putative protein"
at_At3g58040 - mips_14_10 "unknown protein"
mips_14_10_02
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g59940 - no entry null
at_At4g00300 - mips_10 ""
at_At4g01110 - mips_11_05 "hypothetical protein"
mips_11_05_01
at_At4g01350 - no entry null
at_At4g01580 - no entry null
at_At4g01760 - no entry null
at_At4g02180 - no entry null
at_At4g04920 - no entry null
at_At4g05570 - mips_03_01_03 ""
at_At4g09190 - no entry null
at_At4g09770 - no entry null
at_At4g11390 - no entry null
at_At4g11540 - no entry null
at_At4g13130 - no entry null
at_At4g14130 - mips_01_05_99 "xyloglucan endotransglycosylase-related protein XTR-7"
mips_40_01
at_At4g14260 - no entry null
at_At4g14980 - no entry null
at_At4g15060 - no entry null
at_At4g18330 - mips_05_01 "translation initiation factor eIF-2 gamma chain-like protein"
mips_05_04
mips_05_04_02
mips_14_01
mips_14_01_03
mips_40_10_03
at_At4g18990 - mips_01_05_99 "xyloglucan endo-transglycosylase - like protein"
mips_30_01
mips_40_01
at_At4g20040 - no entry null
at_At4g20050 - no entry null
at_At4g20430 - no entry null
at_At4g24990 - mips_06_07_05 "geranylgeranylated protein ATGP4"
mips_06_07_07
mips_06_07_99
mips_40_07
mips_40_25
mips_62
mips_62_01
mips_62_01_01
at_At4g26380 - no entry null
at_At4g27880 - no entry null
at_At4g38930 - mips_06_07 "putative ubiquitin-dependent proteolytic protein"
mips_06_13
mips_06_13_01
mips_25
mips_25_05
mips_25_05_10
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At5g01740 - no entry null
at_At5g02600 - mips_13_01 "putative protein"
at_At5g02990 - no entry null
at_At5g03010 - no entry null
at_At5g03020 - no entry null
at_At5g03700 - no entry null
at_At5g09700 - mips_40_01 "beta-glucosidase - like protein"
at_At5g11420 - no entry null
at_At5g12920 - mips_99 "putative protein"
at_At5g13870 - mips_01_05_01 "endoxyloglucan transferase (dbj|BAA81669.1)"
mips_01_05_99
mips_30_01
mips_40_01
at_At5g15140 - mips_02_01 "putative aldose 1-epimerase - like protein"
at_At5g15660 - no entry null
at_At5g16020 - no entry null
at_At5g17610 - no entry null
at_At5g18160 - no entry null
at_At5g19110 - mips_20_03 "dermal glycoprotein - like"
mips_40_25
at_At5g20030 - no entry null
at_At5g21130 - no entry null
at_At5g22020 - mips_01_20 "putative strictosidine synthase - like"
mips_40_01
at_At5g22200 - no entry null
at_At5g23840 - no entry null
at_At5g25460 - no entry null
at_At5g26190 - no entry null
at_At5g26260 - no entry null
at_At5g35280 - mips_03_01_03 "putative protein"
at_At5g36830 - mips_03_01_03 "putative protein"
at_At5g37210 - no entry null
at_At5g38540 - no entry null
at_At5g53360 - mips_14_10 "ring finger E3 ligase SINAT5 (SINAT5)"
mips_14_10_02
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At5g53780 - no entry null
at_At5g54050 - no entry null
at_At5g55150 - no entry null
at_At5g58820 - no entry null
at_At5g58840 - no entry null
at_At5g59920 - no entry null
at_At5g59930 - no entry null
at_At5g60060 - no entry null
at_At5g62210 - no entry null
at_At5g66830 - no entry null
------------------
Rule 1552
scanregexp_atp_gtp_a(_orf_0,_scanregexp_id_1),hmmtigr(_orf_0,_hmmtigr_id_2,_ipr_3) = 1
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 1
seq_cr9_ratio <= 0.125
ss(_1,_3,c,_2),c_len(_3,15.0-30.0),ss(_1,_2,a,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,33.33-45.54) = 0
eval(_1,_2,9.0e-25-8.0e-10),sq_len(_2,485.0-667.0),classification(_2,proteobacteria) = 1
eval(_1,_2,0.0-9.0e-25),sq_len(_2,349.0-485.0),species(_2,escherichia_coli) = 0
-> class mips_10_01_05_05 "G-protein mediated signal transduction"
Evaluation on training data (2913 items):
at_At1g01200 mips_08_16 "GTP-binding protein, putative"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At1g09180 mips_06_07_99 "putative GTP-binding protein, SAR1B"
mips_08_07
mips_08_07_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_40_08
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At1g10630 mips_06_04 "similar to ADP-ribosylation factor gb|AAD17207; similar to ESTs gb|N65779, gb|AI996946.1, gb|AI725909.1, gb|T45928, gb|T42202"
mips_06_07
mips_06_07_99
mips_08
mips_08_07
mips_08_07_05
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_40_02
mips_40_08
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At1g20090 mips_10_01_05_05 "RAC-like GTP-binding protein ARAC4"
mips_10_01_05_05_01
mips_13_05
mips_13_07
at_At1g22740 mips_10_01_05 "RAS-related protein, RAB7"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
at_At1g43890 mips_10_01_05 "GTP-binding protein, putative"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
at_At1g52280 mips_06_04 "GTP-binding protein RAB7D, putative"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_40_07
mips_40_08
at_At1g70490 mips_08_07 "ADP-ribosylation factor 1 like protein"
mips_08_07_05
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_13_03
mips_13_03_01
mips_30_22
mips_40_08
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At1g75840 mips_10_01_05_05 "rac-like GTP binding protein (ARAC5)"
mips_10_01_05_05_01
mips_13_05
mips_13_07
at_At2g15310 mips_06 "putative ADP-ribosylation factor"
mips_06_04
mips_06_07
mips_06_07_99
mips_08
mips_08_07
mips_08_07_05
mips_10
mips_10_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_13
mips_13_03
mips_13_03_01
mips_14
mips_14_04
mips_25
mips_25_05
mips_40
mips_40_03
mips_40_08
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63
mips_63_19
mips_63_19_05
mips_67
at_At2g18390 mips_08_16 "putative ADP-ribosylation factor"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At2g31680 mips_06_04 "putative RAS superfamily GTP-binding protein"
mips_08
mips_08_07
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40_02
mips_40_07
mips_40_08
mips_63_19_05
at_At2g33870 mips_08_07 "putative GTP-binding protein"
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At2g43130 mips_08_16 "Ras-related GTP-binding protein (ARA-4)"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At2g44610 mips_10_01_05 "putative small GTP-binding protein"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
at_At2g47170 mips_06_07_99 "ADP-ribosylation factor 1"
mips_08_07
mips_08_07_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_30_08
mips_40_08
mips_40_09
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At3g09900 mips_08_07 "putative Ras-like GTP-binding protein"
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At3g09910 mips_10_01_05_05 "putative Ras-like GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At3g15060 mips_08_07 "ras-related GTP-binding protein"
mips_08_16
mips_10_01_05_05
mips_63_19_05
at_At3g22950 mips_06_07_99 "ADP-ribosylation factor, putative"
mips_08_07_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At3g51300 mips_10_01_05 "rac-like GTP binding protein Arac11"
mips_10_01_05_05
mips_10_01_05_05_01
mips_11_01
mips_13_05
mips_13_07
mips_13_11
mips_30_04
at_At3g53610 mips_06_04 "GTPase AtRAB8"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
at_At3g62560 mips_08_07_05 "Sar1-like GTP binding protein"
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_13_05
mips_13_07
mips_62_02_01_01
mips_62_02_01_01_99
at_At4g17530 mips_10_01_05_05 "ras-related small GTP-binding protein RAB1c"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At4g19640 mips_06_04 "small GTP-binding protein - like"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_40_07
mips_40_08
at_At4g28950 mips_10_01_05_05 "rac GTP binding protein Arac7"
mips_10_01_05_05_01
mips_13_05
mips_13_07
at_At4g35020 mips_10_01_05_05 "Rho1Ps homolog/ Rac-like protein"
mips_10_01_05_05_01
mips_13_05
mips_13_07
at_At4g35950 mips_10_01_05_05 "ras-related small GTP-binding protein"
mips_10_01_05_05_01
mips_13_05
mips_13_07
at_At4g39890 mips_10_01_05_05 "small GTP-binding protein - like"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At4g39990 mips_08_07 "GTP-binding protein GB3"
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At5g03530 mips_10_01_05_05 "AtRab GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g10260 mips_06_04 "GTP-binding protein"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At5g14670 mips_06_07_99 "ADP-ribosylation factor - like protein"
mips_08_07_05
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_13_03
mips_13_03_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At5g17060 mips_06_04 "ADP-ribosylation factor -like protein"
mips_06_07
mips_06_07_99
mips_06_10
mips_08
mips_08_07
mips_08_07_05
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_40_08
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At5g37680 mips_08_07 "ADP-ribosylation factor-like protein (K12B20.15)"
mips_08_07_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At5g45750 mips_08_07 "Rab-type small GTP-binding protein-like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g47520 mips_08_16 "GTP-binding protein-like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At5g47960 mips_08_16 "RAS superfamily GTP-binding protein-like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At5g52210 mips_08_07 "GTP-binding protein-like"
mips_08_07_05
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At5g59150 mips_10_01_05_05 "GTP-binding protein rab11 - like"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g60860 mips_08_07 "GTP-binding protein - like"
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
Training Accuracy: 41/41 (100.00%)
Training Frequency class 'mips_10_01_05_05': 104/2913 (3.57%)
Evaluation on validation data (1468 items):
at_At1g05810 mips_06_04 "RAS-related protein ARA-1"
mips_08
mips_08_07
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40_02
mips_40_07
mips_40_08
mips_63_19_05
at_At1g06400 mips_08_07 "putative protein"
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At1g09630 mips_06_04 "putative RAS-related protein, RAB11C"
mips_08
mips_08_07
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_40_02
mips_40_07
mips_40_08
mips_63_19_05
at_At1g28550 mips_08_07 "ras-related GTP-binding protein, putative"
mips_08_16
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At1g56330 mips_04 "unknown protein"
mips_06
mips_06_04
mips_06_07
mips_06_07_99
mips_08
mips_08_07
mips_08_07_05
mips_10
mips_10_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40
mips_40_08
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63
mips_63_03
mips_63_19
mips_63_19_05
mips_67
at_At1g73640 mips_06_04 "putative ras-related GTP-binding protein"
mips_08_13
mips_08_16
mips_08_19
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At2g21880 mips_10_01_05_05 "GTP-binding protein AtRab77"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At2g22290 mips_10_01_05_05 "putative GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At3g46060 mips_04 "GTP-binding protein ara-3"
mips_06
mips_08_07
mips_10
mips_10_01_01
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19
at_At3g46830 mips_08_16 "GTP-binding protein Rab11"
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At5g62880 mips_10_01_05_05 "Arac10"
mips_10_01_05_05_01
mips_13_05
mips_13_07
Validation Accuracy: 11/11 (100.00%)
Validation Frequency class 'mips_10_01_05_05': 47/1468 (3.20%)
Evaluation on propertest data (2441 items):
at_At1g02130 mips_10_01_05_05 "GTP-binding protein, ara-5"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At1g07410 mips_06_04 "small G protein, putative"
mips_08_16
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_11
mips_11_05
mips_13
mips_13_03
mips_13_03_01
mips_40_07
mips_63_19
mips_63_19_05
at_At1g23490 mips_06 "unknown protein (At1g23490)"
mips_08_07
mips_08_07_05
mips_08_16
mips_10
mips_10_01_01
mips_10_01_05_05
mips_10_01_05_05_01
mips_13
mips_13_03
mips_13_03_01
mips_30_22
mips_40_08
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19
mips_63_19_05
mips_67
at_At1g49300 mips_10_01_05 "putative protein"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_40_08
at_At2g17800 mips_10_01_05_05 "putative GTP-binding protein"
mips_10_01_05_05_01
mips_13_05
mips_13_07
at_At2g22390 mips_10_01_05_05 "putative GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At3g07410 mips_08_16 "putative GTP-binding protein"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_40_08
mips_63_19_05
at_At3g11730 mips_10_01_05_05 "putative GTP-binding protein (ATFP8)"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At3g16100 mips_04 "putative RAS-related GTP-binding protein"
mips_06
mips_06_04
mips_10
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11
mips_11_05
mips_40_07
mips_40_08
mips_63
mips_63_03
mips_63_19
at_At3g18820 mips_10_01_05_05 "GTP binding protein, putative"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At3g48040 mips_03 "rac GTP binding protein Arac8 (Arac8)"
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_11
mips_11_01
mips_11_05
mips_11_05_03
mips_13
mips_13_05
mips_13_07
mips_13_11
mips_14
mips_14_04
mips_25
mips_25_05
mips_30
mips_30_04
mips_40_02
mips_63_19
at_At3g49860 mips_10_01_05 "putative protein"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
at_At3g54840 mips_10_01_05_05 "small GTPase Ara6 (ARA6)"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At3g62290 mips_06_07_99 "ADP-ribosylation factor-like protein"
mips_08_07_05
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At4g02080 mips_06_04 "SAR1/GTP-binding secretory factor"
mips_06_07_99
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
at_At4g09720 mips_10_01_05_05 "AtRab76 (AtRAB76)"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At4g18430 - mips_08_16 "membrane-bound small GTP-binding - like protein"
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At4g18800 mips_08_07 "ras-like GTP-binding protein"
mips_08_16
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At5g03520 mips_08_07 "GTP-binding protein - like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g08520 - mips_10_05_01 "putative protein"
mips_10_05_01_10
at_At5g39620 mips_10_01_05_05 "AtRab78 (AtRAB78)"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g45130 mips_10_01_05 "ras-related GTP-binding protein RHA1 (sp|P31582)"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At5g45970 mips_10_01_05 "Rac-like gtp binding protein ARAC2 (sp|Q38903)"
mips_10_01_05_05
mips_10_01_05_05_01
mips_13_05
mips_13_07
at_At5g46390 - mips_01_01 "carboxy-terminal proteinase D1-like protein"
mips_06_01
mips_06_07_11
mips_20_25
mips_20_25_01
mips_20_25_01_01
mips_30_26
mips_30_26_03
mips_63_21
mips_63_21_99
at_At5g54840 mips_04 "SGP1 monomeric G-protein (emb|CAB54517.1)"
mips_06
mips_06_04
mips_08
mips_08_07
mips_10
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40
mips_40_07
mips_40_08
mips_63
mips_63_03
mips_63_19
at_At5g59840 mips_10_01_05 "GTP-binding protein ara-3"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
at_At5g64990 mips_08_16 "GTP binding protein-like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At5g65270 mips_08_16 "GTP-binding protein"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_63_19_05
at_At5g67560 mips_08_07_05 "ADP-ribosylation factor-like protein"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
Propertest Accuracy: 26/29 (89.66%)
Propertest Frequency class 'mips_10_01_05_05': 85/2441 (3.48%)
New (unknown) data (1468 items):
at_At1g15310 - mips_08_16 "putative signal recognition particle 54 kDa subunit"
mips_08_16_05
mips_63_19_05
at_At1g30920 - no entry null
at_At2g26140 - mips_02_13 "FtsH like protease"
mips_06_13_99
at_At3g12160 - no entry null
at_At3g62530 - mips_40_26 "putative protein"
at_At4g11170 - no entry null
at_At5g58900 - mips_06_01 "I-box binding factor - like protein"
------------------
Rule 1393
profscan(_orf_0,_profscan_id_1,_ipr_2),blastprodom(_orf_0,_blastprodom_id_3,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_2) = 1
ss(_1,_3,c,_2),b_len(_2,9.0-11.0) = 0
ss(_1,_3,c,_2),c_len(_3,3.0-6.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,1.0-3.0) = 1
eval(_1,_2,0.0-9.0e-25),sq_len(_2,15.0-349.0),classification(_2,drosophila) = 0
-> class mips_10_01_05_07 "two-component signal transduction system (e.g. response regulator component)"
Evaluation on training data (2913 items):
at_At1g19050 mips_04_05_01_04_01 "putative protein"
mips_10_01_05_07
mips_10_01_99
at_At1g59940 mips_10_01_05_07 "putative protein"
mips_10_01_99
mips_10_05_01
mips_10_05_01_10
at_At2g27070 mips_04_05_01_04_01 "putative two-component response regulator protein"
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At2g41310 mips_02 "putative two-component response regulator 3 protein"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05_01_04_01
mips_10_01_05
mips_10_01_05_07
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At3g48100 mips_02 "response reactor 2 (ATRR2)"
mips_01_04_04
mips_02_13
mips_02_13_03
mips_02_13_05
mips_10_01_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_11_01
at_At3g56380 mips_02_13 "response regulator-like protein"
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05_01_04_01
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At3g57040 mips_02 "responce reactor 4"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_10_01_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At5g49240 mips_10_01_05_07 "putative protein"
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
Training Accuracy: 8/8 (100.00%)
Training Frequency class 'mips_10_01_05_07': 11/2913 (0.38%)
Evaluation on validation data (1468 items):
at_At1g66340 - mips_01_04 "ethylene-response protein, ETR1"
mips_01_04_04
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_11_05_05
mips_14_01
mips_14_01_03
mips_20_20
mips_20_20_18
mips_40_30
at_At1g74890 mips_02_13 "putative response regulator (two component phosphotransfer signaling)"
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05_01_04_01
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
at_At4g16110 mips_01_04 "hypothetical protein"
mips_01_04_04
mips_10_01_05
mips_10_01_05_07
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_11_05_01
mips_11_05_01_01
mips_14_01
mips_30_01
mips_63_03_01
at_At5g02810 mips_01_04_04 "unknown protein"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_10_01_05_07
mips_63_03_01
at_At5g24470 mips_10_01_05 "pseudo-response regulator 5 (APRR5)"
mips_10_01_05_07
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_25_03
at_At5g60100 mips_02_13 "pseudo-response regulator 3 (APRR3)"
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_10_01_05_07
at_At5g61380 mips_02_13 "pseudo-response regulator 1"
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05_01_04_01
mips_10_01_05
mips_10_01_05_07
at_At5g62920 mips_01_04_04 "response regulator 6 (ARR6)"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
Validation Accuracy: 7/8 (87.50%)
Validation Frequency class 'mips_10_01_05_07': 11/1468 (0.75%)
Evaluation on propertest data (2441 items):
at_At1g27320 - mips_01_05_04 "histidine kinase (AHK3)"
mips_13_11_03
mips_13_11_03_13
mips_14_01
mips_14_01_03
mips_20_20
mips_20_20_18
at_At2g01760 mips_01_04 "putative two-component response regulator protein"
mips_01_04_04
mips_10_01_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At2g25180 mips_02_13 "putative two-component response regulator protein"
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
at_At2g40670 mips_02 "putative two-component response regulator protein"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_01
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_07
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_25
mips_25_03
mips_40_03
mips_63_03
mips_63_03_01
Propertest Accuracy: 3/4 (75.00%)
Propertest Frequency class 'mips_10_01_05_07': 8/2441 (0.33%)
New (unknown) data (1468 items):
at_At1g27050 - mips_67_50 "unknown protein"
mips_67_50_25
at_At1g28420 - mips_30_04_99 "hypothetical protein"
mips_40_04_99
at_At2g20910 - mips_63_17_01 "putative diacylglycerol kinase"
at_At3g55770 - no entry null
at_At4g39020 - mips_13_03 "putative protein"
mips_13_03_01
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35_03_17
mips_63_17_01
------------------
Rule 1411
profscan(_orf_0,_profscan_id_1,_ipr_2),blastprodom(_orf_0,_blastprodom_id_3,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_2) = 1
ss(_1,_3,c,_2),alpha_dist(_1,45.54-101.0),c_len(_3,1.0-3.0) = 1
-> class mips_10_01_09_03 "Ca2+ mediated signal transduction"
Evaluation on training data (2913 items):
at_At1g12310 mips_10_01_09 "putative protein"
mips_10_01_09_03
at_At1g18210 mips_10_01_09 "unknown protein"
mips_10_01_09_03
mips_63_17_01
at_At1g24620 mips_10_01_09 "putative calmodulin"
mips_10_01_09_03
mips_63_17
mips_63_17_01
at_At1g62820 mips_06_07_03 "calmodulin, putative"
mips_10_01_05_01
mips_10_01_09
mips_10_01_09_03
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_63_17_01
at_At1g76640 mips_10_01_09 "putative calmodulin"
mips_10_01_09_03
mips_63_01
mips_63_17_01
at_At2g27030 mips_10_01 "calmodulin"
mips_10_01_09
mips_10_01_09_03
mips_13
mips_13_11
mips_13_11_01
mips_20_25_01
mips_20_25_01_01
mips_63_01
at_At2g36180 mips_10_01_09 "putative calmodulin"
mips_10_01_09_03
at_At2g41110 mips_10_01_09 "calmodulin (cam2)"
mips_10_01_09_03
mips_13_11_01
mips_20_25_01
mips_20_25_01_01
mips_63_17_01
at_At3g50360 mips_10_01 "centrin"
mips_10_01_09
mips_10_01_09_03
mips_40_02
mips_40_03
mips_63_01
mips_63_17_01
at_At4g37010 mips_10_01_09 "caltractin-like protein"
mips_10_01_09_03
mips_63_17_01
at_At5g37780 mips_10_01_09 "calmodulin 1 (CAM1)"
mips_10_01_09_03
mips_13_11_01
mips_20_25
mips_20_25_01
mips_20_25_01_01
mips_63_17
mips_63_17_01
at_At5g55990 mips_10_01_09 "calcineurin B-like protein 2 (gb|AAC26009.1)"
mips_10_01_09_03
mips_63_17_01
Training Accuracy: 12/12 (100.00%)
Training Frequency class 'mips_10_01_09_03': 24/2913 (0.82%)
Evaluation on validation data (1468 items):
at_At1g21550 mips_06_07_03 "unknown protein"
mips_10_01_05_01
mips_10_01_09
mips_10_01_09_03
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_11_03
mips_13_11_03_05
mips_48
mips_62_01
mips_62_01_01
mips_62_01_07
mips_63_17_01
at_At1g66340 - mips_01_04 "ethylene-response protein, ETR1"
mips_01_04_04
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_11_05_05
mips_14_01
mips_14_01_03
mips_20_20
mips_20_20_18
mips_40_30
at_At3g25600 mips_10_01_09 "calmodulin, putative"
mips_10_01_09_03
mips_63_17_01
at_At3g59450 - mips_13_11 "putative protein"
mips_13_11_01
mips_20_25_01
mips_20_25_01_01
at_At5g17480 mips_06_07_03 "calcium-binding protein"
mips_10_01_05_01
mips_10_01_09
mips_10_01_09_03
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_11_03
mips_13_11_03_05
mips_48
mips_62_01
mips_62_01_01
mips_62_01_07
mips_63_17_01
at_At5g42380 mips_10 "unknown protein"
mips_10_01
mips_10_01_09
mips_10_01_09_03
mips_40_03
mips_63
mips_63_01
mips_63_17_01
at_At5g53980 - mips_04_05_01_04_01 "unknown protein"
mips_25_05_10
mips_25_05_17
mips_37
mips_37_03
mips_37_03_11
mips_37_03_11_09
mips_37_03_17
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_09
Validation Accuracy: 4/7 (57.14%)
Validation Frequency class 'mips_10_01_09_03': 7/1468 (0.48%)
Evaluation on propertest data (2441 items):
at_At1g66410 mips_10_01_09 "calmodulin-4"
mips_10_01_09_03
mips_13_11_01
mips_20_25_01
mips_20_25_01_01
mips_63_17_01
at_At2g41090 mips_10_01_09 "calcium binding protein (CaBP-22)"
mips_10_01_09_03
mips_63_17_01
at_At2g43290 mips_10_01_09 "putative calcium binding protein"
mips_10_01_09_03
mips_63_17_01
at_At3g43810 mips_10_01_09 "calmodulin 7"
mips_10_01_09_03
mips_13
mips_13_11
mips_13_11_01
mips_20_25_01
mips_20_25_01_01
mips_63_01
at_At3g51920 mips_10_01_09 "putative calmodulin"
mips_10_01_09_03
mips_13_11_01
mips_20_25_01
mips_20_25_01_01
mips_63_17_01
at_At3g56800 mips_10 "calmodulin-3"
mips_10_01
mips_10_01_09
mips_10_01_09_03
mips_13
mips_13_11
mips_13_11_01
mips_20
mips_20_25
mips_20_25_01
mips_20_25_01_01
mips_40_02
mips_40_03
mips_63
mips_63_01
mips_63_17_01
at_At5g37770 mips_10_01_09 "CALMODULIN-RELATED PROTEIN 2, TOUCH-INDUCED (TCH2)"
mips_10_01_09_03
mips_63_17_01
at_At5g39670 mips_10_01_09 "calcium-binding protein - like"
mips_10_01_09_03
mips_63_17_01
at_At5g44460 mips_10_01_09 "calmodulin-like protein"
mips_10_01_09_03
mips_63_17_01
Propertest Accuracy: 9/9 (100.00%)
Propertest Frequency class 'mips_10_01_09_03': 21/2441 (0.86%)
New (unknown) data (1468 items):
at_At1g05990 - mips_13_05 "calcium-binding protein, putative"
mips_40_32
mips_63_17_01
at_At1g06210 - mips_08_07_07 "unknown protein"
mips_30_08
mips_30_25
mips_40_22
mips_40_25
at_At1g18530 - mips_63_17_01 "hypothetical protein"
at_At1g62360 - mips_14_01 "homeobox transcription factor shootmeristemless (stm)"
mips_14_01_03
mips_14_20
mips_25_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35_03_17
at_At1g62990 - mips_25_03 "homeodomain transcription factor KNAT6 (KNAT6)"
at_At1g73630 - mips_63_17_01 "calmodulin like protein"
at_At1g75430 - no entry null
at_At1g76650 - mips_63_17 "calmodulin like protein"
mips_63_17_01
at_At2g15680 - mips_63_17 "putative calmodulin-like protein"
mips_63_17_01
at_At2g41100 - mips_63_17_01 "calmodulin-like protein"
at_At2g41410 - no entry null
at_At3g07490 - mips_10_05 "putative calmodulin"
mips_40_02
mips_63_17
mips_63_17_01
at_At3g10190 - mips_10 "calmodulin-like protein"
mips_10_01
mips_10_01_01
mips_98
at_At3g22930 - mips_63_17_01 "calmodulin, putative"
at_At3g24110 - mips_10_01_01 "hypothetical protein"
mips_63_17_01
at_At3g29000 - no entry null
at_At3g50770 - no entry null
at_At3g59440 - mips_63_17 "calmodulin-like protein"
mips_63_17_01
at_At4g03290 - mips_63_17_01 "putative calmodulin"
at_At4g12860 - no entry null
at_At4g14640 - no entry null
at_At4g18060 - mips_13_03 "putative protein"
mips_13_03_01
mips_62
mips_62_01
mips_62_01_07
mips_63_17
mips_63_17_01
at_At4g20780 - no entry null
at_At4g26470 - mips_10 "putative protein"
mips_10_01
mips_10_01_01
mips_98
at_At5g16880 - mips_08_07 "TOM (target of myb1) -like protein"
mips_08_07_07
mips_08_13
mips_30_08
mips_30_22
mips_40_08
mips_40_09
at_At5g17470 - mips_63_17 "calmodulin-like protein"
mips_63_17_01
------------------
Rule 5
scop_a.4.1 <= 0.0098
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
-> class mips_10_05_01_10 "two-component signal transduction system (sensor kinase component)"
Evaluation on training data (2913 items):
at_At1g14600 mips_10_05_01 "hypothetical protein"
mips_10_05_01_10
at_At1g32240 mips_10 "unknown protein"
mips_10_01
mips_10_01_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11
mips_11_01
mips_30
mips_30_04
at_At1g49560 mips_10_05_01 "unknown protein"
mips_10_05_01_10
mips_30_04
at_At1g79430 mips_10_05_01 "unknown protein"
mips_10_05_01_10
mips_11_01
mips_30_04
at_At2g01060 mips_04 "transfactor-like protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_10
mips_10_01
mips_10_01_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11
mips_11_01
mips_99
at_At2g03500 mips_10_05_01 "unknown protein"
mips_10_05_01_10
mips_25_05_10
mips_25_05_13
mips_25_05_17
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_17
at_At2g20570 mips_10_05_01 "GPRI1 protein (gpri1)"
mips_10_05_01_10
at_At3g13040 mips_10 "unknown protein"
mips_10_01
mips_10_01_01
mips_10_05_01
mips_10_05_01_10
mips_30
at_At3g16857 mips_10_05_01 "ARR1 protein, putative, 5' partial"
mips_10_05_01_10
at_At3g25790 mips_10_05_01 "unknown protein"
mips_10_05_01_10
at_At4g13640 mips_10_05_01 "putative protein"
mips_10_05_01_10
mips_30_04
at_At5g06800 mips_10_05_01 "putative protein"
mips_10_05_01_10
at_At5g16560 mips_10_05_01 "KANADI protein (KAN)"
mips_10_05_01_10
mips_30_04
at_At5g18240 mips_10_05 "transcription factor like protein"
mips_10_05_01
mips_10_05_01_10
mips_11_01
mips_30_04
at_At5g29000 mips_10_05 "unknown protein"
mips_10_05_01
mips_10_05_01_10
mips_11_01
at_At5g44190 mips_10_01 "unknown protein"
mips_10_01_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11
mips_11_01
mips_30
mips_30_04
Training Accuracy: 16/16 (100.00%)
Training Frequency class 'mips_10_05_01_10': 71/2913 (2.44%)
Evaluation on validation data (1468 items):
at_At1g13300 mips_10_05_01 "unknown protein"
mips_10_05_01_10
at_At1g68670 mips_10_01 "unknown protein"
mips_10_01_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11
mips_11_01
mips_30
mips_30_04
at_At1g69580 mips_10_05_01 "transfactor, putative"
mips_10_05_01_10
at_At2g20400 mips_10_05_01 "unknown protein"
mips_10_05_01_10
at_At4g04580 mips_10_05_01 "putative protein"
mips_10_05_01_10
at_At4g28610 mips_10_05_01 "unknown protein"
mips_10_05_01_10
at_At5g05090 mips_10_05_01 "unknown protein"
mips_10_05_01_10
mips_30_04
at_At5g45580 mips_10_05_01 "putative protein"
mips_10_05_01_10
at_At5g63430 - mips_04 "putative protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_40_10
mips_63
mips_63_03
mips_63_03_01
mips_63_17
mips_63_17_09
mips_98
Validation Accuracy: 8/9 (88.89%)
Validation Frequency class 'mips_10_05_01_10': 43/1468 (2.93%)
Evaluation on propertest data (2441 items):
at_At1g25550 mips_10_05_01 "unknown protein"
mips_10_05_01_10
at_At2g02060 mips_10_05_01 "unknown protein"
mips_10_05_01_10
mips_30_04
at_At2g06020 mips_10_05_01 "hypothetical protein"
mips_10_05_01_10
at_At2g38300 mips_10_05 "unknown protein"
mips_10_05_01
mips_10_05_01_10
mips_11_01
mips_30_04
at_At2g40260 mips_10_05_01 "hypothetical protein"
mips_10_05_01_10
mips_30_04
at_At2g40970 mips_10_05_01 "unknown protein"
mips_10_05_01_10
at_At2g42660 mips_10_05 "putative protein"
mips_10_05_01
mips_10_05_01_10
mips_11_01
mips_30_04
at_At3g10760 mips_10_05_01 "unknown protein"
mips_10_05_01_10
at_At3g12730 mips_10_05_01 "regulatory protein of P-starvation acclimation response Psr1, putative"
mips_10_05_01_10
at_At3g24120 mips_10_05_01 "transfactor like protein"
mips_10_05_01_10
at_At3g46640 mips_10_05_01 "putative protein"
mips_10_05_01_10
at_At4g18020 mips_04_05_01_04_01 "pseudo-response regulator 2 (APRR2)"
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
at_At4g36190 - mips_06_07_11 "putative prolyl carboxypeptidase"
mips_06_13_04
mips_06_13_04_01
mips_40_25
mips_47_03_05
mips_47_03_05_01
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
at_At4g37180 mips_10 "putative cytoskeletal protein"
mips_10_01_01
mips_10_05_01
mips_10_05_01_10
at_At5g42630 mips_10_01_01 "unknown protein"
mips_10_05_01
mips_10_05_01_10
at_At5g59570 mips_10_05_01 "ARR1 protein - like"
mips_10_05_01_10
Propertest Accuracy: 15/16 (93.75%)
Propertest Frequency class 'mips_10_05_01_10': 68/2441 (2.79%)
New (unknown) data (1468 items):
at_At1g10820 - no entry null
at_At1g23380 - mips_25_03 "knotted-like homeobox protein, putative"
at_At1g31310 - no entry null
at_At1g36130 - no entry null
at_At1g37080 - no entry null
at_At1g43330 - no entry null
at_At1g55050 - no entry null
at_At1g60670 - no entry null
at_At1g61510 - no entry null
at_At1g68160 - no entry null
at_At1g69600 - no entry null
at_At2g03470 - no entry null
at_At2g06110 - mips_29_02 "putative Athila retroelement ORF1 protein"
at_At2g06660 - mips_02 "putative CENP-B/ARS binding protein-like protein"
mips_01_05
mips_01_05_01
mips_02_16
mips_03
mips_25
mips_25_05
mips_25_05_13
mips_30
mips_30_10
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_40_03
mips_40_10_03
mips_63_03
at_At2g22710 - no entry null
at_At2g26630 - no entry null
at_At2g33550 - no entry null
at_At2g35640 - no entry null
at_At2g39730 - mips_02_11 "Rubisco activase"
mips_02_11_05
mips_04_09
mips_08_07
mips_25_05_25
mips_30_04
mips_30_07
mips_30_08
at_At2g47820 - no entry null
at_At3g07565 - no entry null
at_At3g15320 - no entry null
at_At3g18380 - no entry null
at_At3g19070 - no entry null
at_At3g24860 - no entry null
at_At3g28920 - no entry null
at_At3g29640 - no entry null
at_At3g47680 - mips_99 "hypothetical protein"
at_At3g53440 - no entry null
at_At3g54390 - no entry null
at_At3g55350 - no entry null
at_At3g58630 - no entry null
at_At4g01980 - no entry null
at_At4g04070 - mips_13_05 "hypothetical protein"
mips_25_05_15
mips_35_03_12
mips_63_06
at_At4g12750 - no entry null
at_At4g22450 - no entry null
at_At4g31270 - no entry null
at_At4g36570 - no entry null
at_At5g05550 - no entry null
at_At5g27610 - no entry null
at_At5g28890 - no entry null
at_At5g39760 - no entry null
at_At5g46010 - mips_14_10 "unknown protein"
mips_14_10_02
mips_25_05_10
mips_25_05_13
mips_25_05_15
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
mips_63_03_01
at_At5g47290 - no entry null
at_At5g62110 - no entry null
at_At5g64780 - no entry null
------------------
Rule 1553
scanregexp_atp_gtp_a(_orf_0,_scanregexp_id_1),hmmtigr(_orf_0,_hmmtigr_id_2,_ipr_3) = 1
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 1
ss(_1,_3,a,_2),coil_dist(_1,1.54-41.76),c_len(_2,6.0-9.0) = 0
seq_aw9_ratio <= 0.25
ss(_1,_3,c,_2),c_len(_3,15.0-30.0),ss(_1,_2,a,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,33.33-45.54) = 0
eval(_1,_2,9.0e-25-8.0e-10),sq_len(_2,485.0-667.0),classification(_2,proteobacteria) = 1
eval(_1,_2,0.0-9.0e-25),sq_len(_2,349.0-485.0),species(_2,escherichia_coli) = 0
-> class mips_10_05_01_10 "two-component signal transduction system (sensor kinase component)"
Evaluation on training data (2913 items):
at_At1g01200 mips_08_16 "GTP-binding protein, putative"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At1g22740 mips_10_01_05 "RAS-related protein, RAB7"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
at_At1g43890 mips_10_01_05 "GTP-binding protein, putative"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
at_At1g52280 mips_06_04 "GTP-binding protein RAB7D, putative"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_40_07
mips_40_08
at_At2g18390 mips_08_16 "putative ADP-ribosylation factor"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At2g31680 mips_06_04 "putative RAS superfamily GTP-binding protein"
mips_08
mips_08_07
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40_02
mips_40_07
mips_40_08
mips_63_19_05
at_At2g33870 mips_08_07 "putative GTP-binding protein"
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At2g43130 mips_08_16 "Ras-related GTP-binding protein (ARA-4)"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At2g44610 mips_10_01_05 "putative small GTP-binding protein"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
at_At3g09900 mips_08_07 "putative Ras-like GTP-binding protein"
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At3g09910 mips_10_01_05_05 "putative Ras-like GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At3g15060 - mips_08_07 "ras-related GTP-binding protein"
mips_08_16
mips_10_01_05_05
mips_63_19_05
at_At3g53610 mips_06_04 "GTPase AtRAB8"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
at_At4g17530 mips_10_01_05_05 "ras-related small GTP-binding protein RAB1c"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At4g19640 mips_06_04 "small GTP-binding protein - like"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_40_07
mips_40_08
at_At4g35860 mips_08_07 "GTP-binding protein GB2"
mips_08_07_27
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_13_03
mips_13_03_01
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
at_At4g39890 mips_10_01_05_05 "small GTP-binding protein - like"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At4g39990 mips_08_07 "GTP-binding protein GB3"
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At5g03530 mips_10_01_05_05 "AtRab GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g10260 mips_06_04 "GTP-binding protein"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At5g45750 mips_08_07 "Rab-type small GTP-binding protein-like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g47520 mips_08_16 "GTP-binding protein-like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At5g47960 mips_08_16 "RAS superfamily GTP-binding protein-like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At5g52210 mips_08_07 "GTP-binding protein-like"
mips_08_07_05
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At5g59150 mips_10_01_05_05 "GTP-binding protein rab11 - like"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g60860 mips_08_07 "GTP-binding protein - like"
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
Training Accuracy: 25/26 (96.15%)
Training Frequency class 'mips_10_05_01_10': 71/2913 (2.44%)
Evaluation on validation data (1468 items):
at_At1g05810 mips_06_04 "RAS-related protein ARA-1"
mips_08
mips_08_07
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40_02
mips_40_07
mips_40_08
mips_63_19_05
at_At1g06400 mips_08_07 "putative protein"
mips_08_16
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19_05
at_At1g09630 mips_06_04 "putative RAS-related protein, RAB11C"
mips_08
mips_08_07
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11_05
mips_40_02
mips_40_07
mips_40_08
mips_63_19_05
at_At1g28550 mips_08_07 "ras-related GTP-binding protein, putative"
mips_08_16
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At1g45000 - mips_03_03_01 "similar to 26S proteasome AAA-ATPase subunit RPT4a gb|AAF22524.1; similar to ESTs dbj|AB015110.1, gb|AW443504.1, gb|AI732054.1, gb|AW030587.1, gb|AI812922.1, gb|AW442076.1, gb|AI997275.1, emb|Z17563.1"
mips_06_10
mips_06_13
mips_06_13_01
mips_06_13_01_01
at_At1g73640 mips_06_04 "putative ras-related GTP-binding protein"
mips_08_13
mips_08_16
mips_08_19
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At2g21880 mips_10_01_05_05 "GTP-binding protein AtRab77"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At2g22290 mips_10_01_05_05 "putative GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At3g46060 mips_04 "GTP-binding protein ara-3"
mips_06
mips_08_07
mips_10
mips_10_01_01
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
mips_63_19
at_At3g46830 mips_08_16 "GTP-binding protein Rab11"
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At4g17170 mips_10_01_05_05 "GTP-binding RAB2A like protein"
mips_10_05_01
mips_10_05_01_10
mips_40_09
mips_62_01_03
mips_62_01_99
mips_62_02_05
mips_62_02_99
at_At5g20020 mips_03_01_09 "small Ras-like GTP-binding protein"
mips_03_01_09_05
mips_08_01
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
Validation Accuracy: 11/12 (91.67%)
Validation Frequency class 'mips_10_05_01_10': 43/1468 (2.93%)
Evaluation on propertest data (2441 items):
at_At1g02130 mips_10_01_05_05 "GTP-binding protein, ara-5"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At1g07410 - mips_06_04 "small G protein, putative"
mips_08_16
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_11
mips_11_05
mips_13
mips_13_03
mips_13_03_01
mips_40_07
mips_63_19
mips_63_19_05
at_At2g22390 mips_10_01_05_05 "putative GTP-binding protein"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At3g07410 - mips_08_16 "putative GTP-binding protein"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_40_08
mips_63_19_05
at_At3g11730 mips_10_01_05_05 "putative GTP-binding protein (ATFP8)"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At3g16100 mips_04 "putative RAS-related GTP-binding protein"
mips_06
mips_06_04
mips_10
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11
mips_11_05
mips_40_07
mips_40_08
mips_63
mips_63_03
mips_63_19
at_At3g18820 mips_10_01_05_05 "GTP binding protein, putative"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At3g54840 mips_10_01_05_05 "small GTPase Ara6 (ARA6)"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At3g62290 - mips_06_07_99 "ADP-ribosylation factor-like protein"
mips_08_07_05
mips_08_16
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_05
at_At4g09720 mips_10_01_05_05 "AtRab76 (AtRAB76)"
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At4g17160 mips_08_16 "GTP-binding RAB2A like protein"
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At4g18430 mips_08_16 "membrane-bound small GTP-binding - like protein"
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At4g18800 mips_08_07 "ras-like GTP-binding protein"
mips_08_16
mips_10_01_05_05
mips_10_05_01
mips_10_05_01_10
mips_63_19_05
at_At5g03520 mips_08_07 "GTP-binding protein - like"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_08
at_At5g08520 mips_10_05_01 "putative protein"
mips_10_05_01_10
at_At5g20010 mips_03_01_09 "small Ras-like GTP-binding nuclear protein"
mips_03_01_09_05
mips_08_01
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At5g45130 mips_10_01_05 "ras-related GTP-binding protein RHA1 (sp|P31582)"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
at_At5g46390 - mips_01_01 "carboxy-terminal proteinase D1-like protein"
mips_06_01
mips_06_07_11
mips_20_25
mips_20_25_01
mips_20_25_01_01
mips_30_26
mips_30_26_03
mips_63_21
mips_63_21_99
at_At5g54840 mips_04 "SGP1 monomeric G-protein (emb|CAB54517.1)"
mips_06
mips_06_04
mips_08
mips_08_07
mips_10
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40
mips_40_07
mips_40_08
mips_63
mips_63_03
mips_63_19
at_At5g55080 mips_03 "salt stress inducible small GTP binding protein Ran1-like protein"
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_03_03
mips_03_03_01
mips_06_04
mips_08
mips_08_01
mips_10_01
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_40_08
mips_63_03
mips_63_19
at_At5g55190 mips_03_01_09 "salt stress inducible small GTP binding protein Ran1 homolog"
mips_03_01_09_05
mips_04_07
mips_08_01
mips_10_05_01
mips_10_05_01_10
at_At5g59840 mips_10_01_05 "GTP-binding protein ara-3"
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
at_At5g65270 mips_08_16 "GTP-binding protein"
mips_10_01_05
mips_10_01_05_05
mips_10_01_05_05_01
mips_10_05_01
mips_10_05_01_10
mips_40_07
mips_63_19_05
at_At5g67100 - mips_03_01_05_01 "DNA polymerase alpha 1"
Propertest Accuracy: 19/24 (79.17%)
Propertest Frequency class 'mips_10_05_01_10': 68/2441 (2.79%)
New (unknown) data (1468 items):
at_At1g30920 - no entry null
at_At2g26140 - mips_02_13 "FtsH like protease"
mips_06_13_99
at_At3g12160 - no entry null
at_At4g11170 - no entry null
at_At4g17780 - mips_01_01_04 "MYB transcription factor like protein"
mips_01_03
mips_01_03_13
at_At5g58900 - mips_06_01 "I-box binding factor - like protein"
------------------
Rule 1394
profscan(_orf_0,_profscan_id_1,_ipr_2),blastprodom(_orf_0,_blastprodom_id_3,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_2) = 1
ss(_1,_3,c,_2),c_len(_3,3.0-6.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,1.0-3.0) = 1
ss(_1,_3,c,_2),b_len(_2,1.0-3.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3),alpha_dist(_1,13.03-23.6) = 0
eval(_1,_2,0.0-9.0e-25),sq_len(_2,15.0-349.0),classification(_2,drosophila) = 0
-> class mips_10_05_01_10 "two-component signal transduction system (sensor kinase component)"
Evaluation on training data (2913 items):
at_At1g19050 - mips_04_05_01_04_01 "putative protein"
mips_10_01_05_07
mips_10_01_99
at_At1g59940 mips_10_01_05_07 "putative protein"
mips_10_01_99
mips_10_05_01
mips_10_05_01_10
at_At2g01830 mips_01_04_04 "cytokinin receptor CRE1b (CRE1)"
mips_01_05_04
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_13_11_03
mips_13_11_03_13
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_30
at_At2g17820 mips_01_05_01_01_01 "histidine kinase 1"
mips_01_20_03
mips_02_08
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_11_05_01_01
mips_62_01
mips_62_01_01
at_At2g27070 mips_04_05_01_04_01 "putative two-component response regulator protein"
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At2g41310 mips_02 "putative two-component response regulator 3 protein"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05_01_04_01
mips_10_01_05
mips_10_01_05_07
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At3g23150 mips_02_13 "ethylene receptor, putative"
mips_02_13_05
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_11_05_05
mips_11_05_05_99
mips_14_01_03
mips_20_20
mips_20_20_18
mips_40_30
at_At3g48100 mips_02 "response reactor 2 (ATRR2)"
mips_01_04_04
mips_02_13
mips_02_13_03
mips_02_13_05
mips_10_01_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_11_01
at_At3g56380 mips_02_13 "response regulator-like protein"
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05_01_04_01
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At3g57040 mips_02 "responce reactor 4"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_10_01_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At5g10720 mips_01_04 "histidine kinase - like protein"
mips_01_04_04
mips_01_05_04
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_11_05_05
mips_11_05_05_99
mips_13_11_03
mips_13_11_03_13
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
at_At5g35750 mips_01_05_04 "histidine kinase (AHK2)"
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_13_11_03
mips_13_11_03_13
mips_14_01_03
mips_20_20
mips_20_20_18
mips_40_30
at_At5g49240 mips_10_01_05_07 "putative protein"
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
Training Accuracy: 12/13 (92.31%)
Training Frequency class 'mips_10_05_01_10': 71/2913 (2.44%)
Evaluation on validation data (1468 items):
at_At1g66340 mips_01_04 "ethylene-response protein, ETR1"
mips_01_04_04
mips_06_07_03
mips_10_05_01
mips_10_05_01_10
mips_11_05_05
mips_14_01
mips_14_01_03
mips_20_20
mips_20_20_18
mips_40_30
at_At1g74890 mips_02_13 "putative response regulator (two component phosphotransfer signaling)"
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05_01_04_01
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
at_At5g62920 mips_01_04_04 "response regulator 6 (ARR6)"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
Validation Accuracy: 3/3 (100.00%)
Validation Frequency class 'mips_10_05_01_10': 43/1468 (2.93%)
Evaluation on propertest data (2441 items):
at_At1g27320 - mips_01_05_04 "histidine kinase (AHK3)"
mips_13_11_03
mips_13_11_03_13
mips_14_01
mips_14_01_03
mips_20_20
mips_20_20_18
at_At2g01760 mips_01_04 "putative two-component response regulator protein"
mips_01_04_04
mips_10_01_05
mips_10_01_05_07
mips_10_05_01
mips_10_05_01_10
mips_63_03_01
at_At2g40670 mips_02 "putative two-component response regulator protein"
mips_02_13
mips_02_13_01
mips_02_13_03
mips_02_13_05
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_01
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_07
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_25
mips_25_03
mips_40_03
mips_63_03
mips_63_03_01
at_At2g47430 mips_01_04 "putative histidine kinase"
mips_01_04_04
mips_06_07
mips_06_07_03
mips_10_01
mips_10_01_01
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_11
mips_11_05
mips_11_05_05
mips_11_05_05_99
mips_40_30
Propertest Accuracy: 3/4 (75.00%)
Propertest Frequency class 'mips_10_05_01_10': 68/2441 (2.79%)
New (unknown) data (1468 items):
at_At1g27050 - mips_67_50 "unknown protein"
mips_67_50_25
at_At1g28420 - mips_30_04_99 "hypothetical protein"
mips_40_04_99
at_At1g30490 - mips_25_05_10 "HD-Zip protein"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At1g44900 - mips_03_01_03 "transcription factor, putative"
mips_40_10_03
mips_40_10_99
at_At1g73360 - mips_14_10 ""
mips_14_10_02
mips_25_05_10
at_At2g07690 - mips_03 "putative DNA replication licensing factor, mcm5"
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_14_04
mips_25_05
mips_63_01
mips_63_19
at_At2g14050 - mips_40_10_03 "putative DNA replication licensing factor"
at_At2g16440 - mips_03_01 "putative CDC21 protein"
mips_03_01_03
mips_03_03_01
mips_14_04
mips_30_10
mips_40_10_03
mips_63_19
at_At2g32370 - no entry null
at_At2g34710 - mips_25_05_10 "homeodomain transcription factor (ATHB-14)"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At2g46090 - no entry null
at_At3g09660 - no entry null
at_At3g55770 - no entry null
at_At4g02060 - mips_40_10_03 "PROLIFERA"
at_At4g04890 - mips_25_05_10 "putative homeotic protein"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At4g17710 - mips_14_10 "GLABRA2 like protein"
mips_14_10_02
mips_25_03
mips_25_05_10
at_At4g32880 - mips_25_05_10 "HD-zip transcription factor (athb-8)"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At4g39020 - mips_13_03 "putative protein"
mips_13_03_01
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35_03_17
mips_63_17_01
at_At5g46280 - mips_63_03_01 "MCM3 homolog (emb|CAA03887.1)"
at_At5g46880 - no entry null
------------------
Rule 1453
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_3,_ipr_2),fprintscan(_orf_0,_fprintscan_id_4,_ipr_2) = 1
seq_fc1_ratio <= 0.041
ss(_1,_3,b,_2),c_len(_2,11.0-15.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3),a_len(_5,11.0-15.0) = 1
ss(_1,_3,b,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,11.94-19.41),a_len(_4,6.0-9.0) = 0
seq_cq1_ratio <= 0
-> class mips_11_05_05_99 "other virulence, disease factors"
Evaluation on training data (2913 items):
at_At2g19980 mips_11_05_05 "putative pathogenesis-related protein"
mips_11_05_05_99
mips_40_27
at_At2g19990 mips_11_05_03 "pathogenesis-related protein (PR-1)"
mips_11_05_05
mips_11_05_05_99
mips_40_27
at_At3g19690 mips_11_05_03 "PR-1 protein, putative"
mips_11_05_05
mips_11_05_05_99
mips_40_27
at_At4g07820 mips_11_05_05 "putative pathogenesis-related protein"
mips_11_05_05_99
at_At4g30320 mips_11_05_05 "PR-1-like protein"
mips_11_05_05_99
mips_40_27
at_At4g33720 mips_11_05_03 "pathogenesis-related protein 1 precursor, 19.3K"
mips_11_05_05
mips_11_05_05_99
at_At4g33730 mips_11_05_05 "pathogenesis-related protein - like"
mips_11_05_05_99
mips_40_27
Training Accuracy: 7/7 (100.00%)
Training Frequency class 'mips_11_05_05_99': 11/2913 (0.38%)
Evaluation on validation data (1468 items):
at_At1g35160 - mips_13_01_01_01 "32kDa endonuclease, putative"
mips_13_11
mips_13_11_03
mips_13_11_03_05
mips_20_25_01
mips_20_25_07
mips_20_25_07_03
mips_20_25_07_99
mips_43
mips_43_03
mips_43_03_13
mips_43_03_99
mips_62_01_01
mips_62_02_01
mips_62_02_07
mips_63_02
mips_63_13
mips_63_13_03
at_At3g09590 mips_11_05_05 "putative pathogenesis-related protein"
mips_11_05_05_99
mips_40_27
mips_62_02_01_02
at_At3g16770 - mips_04 "AP2 domain containing protein RAP2.3"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_98
mips_99
at_At3g45990 - mips_08_19 "actin depolymerising like protein"
mips_14_04_03
mips_14_04_03_01
at_At4g25780 mips_11_05_05 "putative pathogenesis-related protein"
mips_11_05_05_99
mips_40_27
mips_62_02_01_02
at_At4g25790 mips_11_05_03 "putative pathogenesis-related protein"
mips_11_05_05
mips_11_05_05_99
mips_40_27
at_At4g33710 mips_11_05_03 "pathogenesis-related protein 1 precursor, 18.9K"
mips_11_05_05
mips_11_05_05_99
at_At5g57625 mips_11_05_05 "pathogenesis-related protein - like"
mips_11_05_05_99
mips_40_27
Validation Accuracy: 5/8 (62.50%)
Validation Frequency class 'mips_11_05_05_99': 8/1468 (0.54%)
Evaluation on propertest data (2441 items):
at_At1g50060 mips_11 "branched-chain amino acid aminotransferase, putative"
mips_11_05
mips_11_05_03
mips_11_05_05
mips_11_05_05_99
mips_99
at_At1g64610 - mips_14_10 "putative protein"
mips_14_10_02
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_62_02_01_01
at_At1g78220 - mips_10_05_01 "putative 14-3-3 protein"
mips_10_05_01_12
mips_10_05_01_12_99
mips_10_05_01_18
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_11_03
mips_13_11_03_05
mips_20_25
mips_20_25_01
mips_20_25_07
mips_20_25_07_03
mips_20_25_07_99
mips_43
mips_43_03
mips_43_03_13
mips_43_03_99
mips_62
mips_62_01
mips_62_01_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_07
mips_63_02
mips_63_13
mips_63_13_03
mips_63_17
mips_63_17_01
at_At1g78300 - mips_13_11_03 "putative tyrosine activation protein"
mips_13_11_03_05
mips_20_25
mips_20_25_01
mips_20_25_07
mips_20_25_07_03
mips_20_25_07_99
mips_43
mips_43_03
mips_43_03_13
mips_43_03_99
mips_62
mips_62_01_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_07
mips_63_02
mips_63_13
mips_63_13_03
mips_63_17_01
at_At2g14610 mips_11_05_05 "pathogenesis-related PR-1-like protein"
mips_11_05_05_99
at_At2g19970 mips_11_05_05 "putative pathogenesis-related protein"
mips_11_05_05_99
at_At4g23900 - mips_01_03_13 "unknown protein"
mips_04_05_01_04_01
mips_63_19_03
at_At5g08560 - mips_04_05_05 "WD-repeat protein-like"
mips_04_05_05_01
mips_04_05_05_01_10
mips_48
at_At5g26130 mips_11_05 "pathogenesis-related protein - like"
mips_11_05_03
mips_11_05_05
mips_11_05_05_99
at_At5g62020 - mips_04_05_01_04_01 "heat shock factor 6"
mips_11_01_05
mips_30_10
at_At5g66590 mips_11 "Unknown protein (K1F13.27)"
mips_11_05
mips_11_05_03
mips_11_05_05
mips_11_05_05_99
mips_40_27
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
Propertest Accuracy: 5/11 (45.45%)
Propertest Frequency class 'mips_11_05_05_99': 15/2441 (0.61%)
New (unknown) data (1468 items):
at_At1g15360 - no entry null
at_At1g17590 - no entry null
at_At1g51190 - no entry null
at_At2g14580 - no entry null
at_At2g20330 - no entry null
at_At2g21430 - mips_02_99 "putative cysteine proteinase"
mips_06_13_04
mips_06_13_99
mips_08_13
mips_40_25
at_At2g47520 - no entry null
at_At3g15980 - mips_40_08 "putative coatomer complex subunit"
at_At3g20840 - no entry null
at_At4g16190 - mips_02_99 "cysteine proteinase like protein"
mips_06_13_04
mips_06_13_99
mips_08_13
mips_40_25
at_At4g18880 - no entry null
at_At4g32551 - no entry null
at_At4g36880 - mips_06_13_99 "cysteine proteinase"
mips_08_13
mips_40_25
at_At5g08390 - mips_13_05 "katanin p80 subunit - like protein"
mips_40_04_05
at_At5g10510 - no entry null
at_At5g45710 - no entry null
at_At5g65510 - no entry null
at_At5g67180 - mips_25_03 "floral homeotic protein apetala2-like"
------------------
Rule 975
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
ss(_1,_3,c,_2),c_len(_3,9.0-11.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2) = 0
eval(_1,_2,0.0-9.0e-25),desc(_2,precursor) = 0
eval(_1,_2,8.0e-10-2.0e-5),sq_len(_2,1005.0-6487.0),classification(_2,mus) = 0
eval(_1,_2,9.0e-25-8.0e-10),db_ref(_2,pir),desc(_2,intergenic) = 0
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,1574.0-38820.0),species(_2,schizosaccharomyces_pombe__fission_yeast_) = 0
-> class mips_11_07_07_01 "catalase reaction"
Evaluation on training data (2913 items):
at_At1g02920 mips_01_20_35 "glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02930 mips_01_20 "glutathione S-transferase"
mips_01_20_35
mips_01_20_35_01
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02940 mips_01_20_35 ""
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02950 mips_11_07_07 "glutathione S-transferase (GST31)"
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g17170 mips_01_01_10_05 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_67_01
at_At1g53680 mips_01 "glutathione transferase, putative"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g59700 mips_01_01_01_11 "glutathione S-transferase, putative"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
at_At1g69920 mips_11_07 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g77290 mips_01_20_35 "putative protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78320 mips_01_01 "2,4-D inducible glutathione S-transferase like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
at_At1g78370 mips_11_01 "unknown protein"
mips_11_01_01
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78380 mips_11_07 "glutathione S-transferase like protein"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_10_05
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_04
at_At2g29450 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g30860 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g09270 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g43800 mips_11_07_07 "glutathione transferase-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_33_03_13
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_01_01
Training Accuracy: 16/16 (100.00%)
Training Frequency class 'mips_11_07_07_01': 17/2913 (0.58%)
Evaluation on validation data (1468 items):
at_At1g27140 - mips_01_01_01 "glutathione transferase, putative"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_05_03
mips_67_01
mips_67_01_01
at_At2g02380 - mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
at_At2g02930 mips_01_20_35 "putative glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g47730 mips_11_01_01 "glutathione S-transferase (GST6)"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g02790 - mips_01 "unknown protein"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
mips_98
at_At5g17220 mips_01_20_35 "glutathione S-transferase-like protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g41240 - mips_01_01_10_05 "glutathione transferase"
mips_11_07_07
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_62_02_01_01
Validation Accuracy: 3/7 (42.86%)
Validation Frequency class 'mips_11_07_07_01': 5/1468 (0.34%)
Evaluation on propertest data (2441 items):
at_At1g17190 mips_11_01_01 "putative glutathione transferase"
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g27130 - mips_01_01 "glutathione transferase, putative"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50_25
at_At1g49860 mips_11_07_07 "glutathione S-transferase, putative"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69930 - mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
at_At1g78340 - mips_01_01_01_11 "GST7 like protein"
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
at_At2g02390 - mips_01_01_01 "glutathione S-transferase like protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_03_01_05
mips_03_01_05_01
mips_11_07
mips_11_07_07
mips_11_07_07_03
at_At2g29440 mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_45
mips_45_03
mips_45_03_12
at_At2g30870 mips_11_07_07 "glutathione S-transferase (erd13)"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g62760 mips_11_07_07 "Glutathione transferase III-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At4g02520 mips_01_20_35 "Atpm24.1 glutathione S transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g41210 - mips_01_01_01_11 "glutathione transferase AtGST 10 (emb|CAA10457.1)"
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_01_20_35
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_03
mips_62_02_01_01
Propertest Accuracy: 6/11 (54.55%)
Propertest Frequency class 'mips_11_07_07_01': 9/2441 (0.37%)
New (unknown) data (1468 items):
at_At2g29460 - mips_20 "putative glutathione S-transferase"
mips_40_04
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
------------------
Rule 968
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
eval(_1,_2,0.0-9.0e-25),desc(_2,precursor) = 0
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,1574.0-38820.0),species(_2,schizosaccharomyces_pombe__fission_yeast_) = 0
-> class mips_11_07_07_03 "glutathione conjugation reaction"
Evaluation on training data (2913 items):
at_At1g02920 mips_01_20_35 "glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02930 mips_01_20 "glutathione S-transferase"
mips_01_20_35
mips_01_20_35_01
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02940 mips_01_20_35 ""
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02950 mips_11_07_07 "glutathione S-transferase (GST31)"
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g10360 mips_01_01_01_11 "putative glutathione S-transferase TSI-1"
mips_05_04_02
mips_05_07
mips_05_10
mips_05_99
mips_11_07_07
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
at_At1g17170 mips_01_01_10_05 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_67_01
at_At1g53680 mips_01 "glutathione transferase, putative"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g59670 mips_01_01_01_11 "glutathione S-transferase, putative"
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
mips_25_05_13
mips_33_03_13
mips_35_03_17
mips_47_03_11
mips_47_03_11_07
at_At1g59700 mips_01_01_01_11 "glutathione S-transferase, putative"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
at_At1g69920 mips_11_07 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g77290 mips_01_20_35 "putative protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78320 mips_01_01 "2,4-D inducible glutathione S-transferase like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
at_At1g78360 mips_01_01_01_11 "hypothetical protein"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_03
mips_47_03_11
mips_47_03_11_07
at_At1g78370 mips_11_01 "unknown protein"
mips_11_01_01
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78380 mips_11_07 "glutathione S-transferase like protein"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_10_05
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_04
at_At2g29450 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g30860 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g09270 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g43800 mips_11_07_07 "glutathione transferase-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_33_03_13
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_01_01
at_At5g44000 mips_11_05 "putative protein"
mips_11_07_07
mips_11_07_07_03
Training Accuracy: 20/20 (100.00%)
Training Frequency class 'mips_11_07_07_03': 27/2913 (0.93%)
Evaluation on validation data (1468 items):
at_At1g10370 - mips_01_01_01_11 "glutathione S-transferase (GST30b)"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_20_25_07
mips_20_25_07_03
at_At1g27140 - mips_01_01_01 "glutathione transferase, putative"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_05_03
mips_67_01
mips_67_01_01
at_At1g74590 mips_01_01 "glutathione S-transferase like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
at_At2g02380 mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
at_At2g02930 mips_01_20_35 "putative glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g29470 - mips_01_01 "putative glutathione S-transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At2g47730 mips_11_01_01 "glutathione S-transferase (GST6)"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g49850 - mips_04 "MYB -like protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
at_At5g02790 - mips_01 "unknown protein"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
mips_98
at_At5g17220 mips_01_20_35 "glutathione S-transferase-like protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g41240 mips_01_01_10_05 "glutathione transferase"
mips_11_07_07
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_62_02_01_01
Validation Accuracy: 6/11 (54.55%)
Validation Frequency class 'mips_11_07_07_03': 10/1468 (0.68%)
Evaluation on propertest data (2441 items):
at_At1g17180 mips_05 "putative glutathione transferase"
mips_05_04
mips_05_04_02
mips_05_07
mips_05_10
mips_05_99
mips_06_01
mips_06_10
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_07
at_At1g17190 mips_11_01_01 "putative glutathione transferase"
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g27130 - mips_01_01 "glutathione transferase, putative"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50_25
at_At1g49860 mips_11_07_07 "glutathione S-transferase, putative"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69930 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
at_At1g78340 mips_01_01_01_11 "GST7 like protein"
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
at_At2g02390 mips_01_01_01 "glutathione S-transferase like protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_03_01_05
mips_03_01_05_01
mips_11_07
mips_11_07_07
mips_11_07_07_03
at_At2g29420 mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g29440 mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_45
mips_45_03
mips_45_03_12
at_At2g29480 - mips_01 "putative glutathione S-transferase"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_04
mips_98
at_At2g30870 mips_11_07_07 "glutathione S-transferase (erd13)"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g62760 mips_11_07_07 "Glutathione transferase III-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At4g02520 mips_01_20_35 "Atpm24.1 glutathione S transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g41210 mips_01_01_01_11 "glutathione transferase AtGST 10 (emb|CAA10457.1)"
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_01_20_35
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_03
mips_62_02_01_01
Propertest Accuracy: 12/14 (85.71%)
Propertest Frequency class 'mips_11_07_07_03': 17/2441 (0.70%)
New (unknown) data (1468 items):
at_At1g05350 - mips_01_07 "unknown protein"
mips_01_07_01
mips_06_07_07
mips_30_25
mips_40_25
mips_67_50
mips_67_50_25
at_At1g57720 - mips_05_04_02 "unknown protein"
mips_05_07
mips_05_10
mips_05_99
at_At1g75270 - mips_05_10 "GSH-dependent dehydroascorbate reductase 1, putative"
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
at_At2g29460 - mips_20 "putative glutathione S-transferase"
mips_40_04
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
at_At2g29490 - mips_40_10_05 "putative glutathione S-transferase"
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04_07
mips_67_50_25
at_At5g45900 - mips_01_07 "autophagy 7 (AtAPG7)"
mips_01_07_01
mips_06_07_07
mips_30_25
mips_40_25
mips_67_50
mips_67_50_25
------------------
Rule 1435
scanregexp_atp_gtp_a(_orf_0,_scanregexp_id_1),profscan(_orf_0,_profscan_id_2,_ipr_3),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_3) = 1
profscan(_orf_0,_profscan_id_1,_ipr_2),fprintscan(_orf_0,_fprintscan_id_3,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_4,_ipr_2) = 1
ss(_1,_3,c,_2),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_4,a,_5),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3),alpha_dist(_1,45.54-101.0) = 0
seq_va10_ratio <= 0.763
-> class mips_25_05_19_09 "medio-lateral axis determination"
Evaluation on training data (2913 items):
at_At2g21300 mips_08_22 "putative kinesin heavy chain"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04_05
mips_63_06
at_At2g21380 mips_08 "putative kinesin heavy chain"
mips_08_22
mips_08_22_01
mips_25
mips_25_05
mips_25_05_19
mips_25_05_19_09
mips_30
mips_30_04
mips_30_04_05
mips_40
mips_40_04
mips_40_16
mips_63
mips_63_01
mips_63_06
mips_63_19
at_At3g16060 mips_08_22 "kinesin like protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04
mips_30_04_05
mips_40_04
mips_40_04_05
mips_63_06
at_At4g38950 mips_08_22 "kinesin like protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04_05
mips_63_06
at_At5g27000 mips_08 "kinesin-like heavy chain (KATD)"
mips_08_22
mips_08_22_01
mips_08_99
mips_25_05_19
mips_25_05_19_09
mips_30_04
mips_30_04_05
mips_40_04
mips_63_06
Training Accuracy: 5/5 (100.00%)
Training Frequency class 'mips_25_05_19_09': 6/2913 (0.21%)
Evaluation on validation data (1468 items):
at_At2g35210 - mips_04_09 "unknown protein"
mips_08_16
mips_08_19
mips_40_09
mips_40_10_05
mips_62_02_01_01
at_At3g19050 mips_08_22 "hypothetical protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_40_04
mips_40_04_05
at_At3g43210 mips_08 "kinesin -like protein"
mips_08_22
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04
mips_30_04_05
mips_40_04
mips_40_16
mips_63_06
at_At4g14330 mips_08_22 "kinesin like protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_63_06
at_At5g13300 - mips_62_02_01_01 "putative protein"
at_At5g27550 mips_08_22 "kinesin-like protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04_05
mips_63_06
Validation Accuracy: 4/6 (66.67%)
Validation Frequency class 'mips_25_05_19_09': 5/1468 (0.34%)
Evaluation on propertest data (2441 items):
at_At1g55550 mips_08_22 ""
mips_08_22_01
mips_08_99
mips_25_05_19
mips_25_05_19_09
mips_30_04
mips_30_04_05
mips_63_06
at_At2g03060 - mips_04_05_01_04_01 "homeodomain transcription factor (AGL30)"
mips_25_05_13
mips_25_05_15
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_12
mips_35_03_17
mips_63_03_01
at_At3g10180 mips_08_22 "putative kinesin-like centromere protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04_05
mips_40_08
mips_63_06
at_At3g10310 mips_08_22 "kinesin-like protein"
mips_08_22_01
mips_08_99
mips_25_05_19
mips_25_05_19_09
mips_30_04_05
mips_63_06
at_At4g18130 - mips_06_07_03 "phytochrome E"
mips_10_01_99
mips_10_05_01
mips_10_05_01_10
mips_11_05_05
mips_11_05_05_99
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_01
mips_40_30
at_At5g27950 mips_08_22 "unknown protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04_05
mips_63_06
Propertest Accuracy: 4/6 (66.67%)
Propertest Frequency class 'mips_25_05_19_09': 7/2441 (0.29%)
New (unknown) data (1468 items):
at_At1g05910 - mips_02_11_05 "unknown protein"
mips_04_09
mips_06_13_01
mips_25_05_25
mips_30_07
mips_30_08
at_At1g09170 - mips_08_99 "putative kinesin"
at_At1g18550 - mips_08_99 "hypothetical protein"
mips_63_06
at_At1g21730 - mips_30_04 "kinesin-related protein (MKRP1)"
mips_40_07
mips_63_06
at_At1g31340 - mips_06_13_01 "polyubiquitin, putative"
at_At1g54490 - mips_01_03 "putative protein"
mips_01_03_16
mips_03_01_05
mips_04_01
mips_04_01_04
mips_04_05_05
mips_08_01
at_At1g59540 - mips_63_06 "zcf125 kinesin-like protein"
at_At1g63640 - mips_08_22 "kinesin-like protein"
mips_08_99
mips_63_06
at_At1g72250 - mips_30_04 "kinesin, putative"
mips_40_07
mips_63_06
at_At2g05390 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_02
mips_29_99
at_At2g07550 - no entry null
at_At2g17870 - mips_40_27 "putative glycine-rich, zinc-finger DNA-binding protein"
mips_40_27_01
at_At2g19840 - no entry null
at_At2g22610 - mips_08_22 "putative kinesin heavy chain"
mips_08_99
mips_63_06
at_At2g46280 - no entry null
at_At2g46290 - mips_05 "eukaryotic translation initiation factor 3 delta subunit"
mips_05_04
mips_10_05
mips_40_02
mips_40_03
mips_63_19
at_At2g47500 - mips_08_22 "putative kinesin heavy chain"
mips_08_22_01
mips_08_99
mips_13_03
mips_13_03_01
mips_30_04_05
mips_40_04
mips_40_04_05
mips_43
mips_43_03
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_63_06
at_At3g12020 - mips_08_22 "hypothetical protein"
mips_63_06
at_At3g16630 - mips_08_22 "kinesin-like protein"
mips_08_22_01
mips_30_04_05
mips_40_04_05
mips_63_06
at_At3g23670 - mips_06_04 "hypothetical protein"
mips_30
mips_40_04
mips_63_01
mips_63_06
mips_63_19
at_At3g44730 - mips_06_04 "kinesin-like protein heavy chain (KP1)"
mips_08
mips_08_99
mips_30_04
mips_40_04
mips_40_07
mips_40_08
mips_40_16
mips_63_06
at_At3g49650 - mips_08_22 "kinesin-like protein"
mips_63_06
at_At3g51150 - mips_30_04 "putative protein"
mips_40_04
mips_40_16
mips_63_06
at_At4g04420 - mips_29_02 "putative transposon protein"
at_At4g12200 - no entry null
at_At4g14370 - mips_03_99 "disease resistance N like protein"
at_At4g17890 - no entry null
at_At4g19150 - mips_63_07 "ankyrin-like protein"
at_At4g24170 - no entry null
at_At4g39050 - mips_08_22 "kinesin like protein"
mips_30
mips_30_04
mips_40
mips_40_03
mips_40_04
mips_63
mips_63_01
mips_63_06
mips_63_19
at_At5g41310 - mips_08_99 "kinesin-like protein"
mips_63_06
at_At5g42490 - mips_08_22 "kinesin heavy chain-like protein"
mips_08_22_01
mips_63_06
at_At5g49930 - mips_11_05_05 "putative protein"
mips_13_07
at_At5g66310 - mips_06 "kinesin heavy chain DNA binding protein-like"
mips_06_04
mips_08
mips_08_22
mips_30
mips_30_04
mips_40_04
mips_40_07
mips_40_08
mips_63
mips_63_01
mips_63_06
mips_63_19
------------------
Rule 979
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
ss(_1,_3,c,_2),c_len(_3,9.0-11.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2) = 0
eval(_1,_2,0.0-9.0e-25),desc(_2,precursor) = 0
eval(_1,_2,8.0e-10-2.0e-5),sq_len(_2,1005.0-6487.0),classification(_2,mus) = 0
eval(_1,_2,9.0e-25-8.0e-10),db_ref(_2,pir),desc(_2,intergenic) = 0
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,1574.0-38820.0),species(_2,schizosaccharomyces_pombe__fission_yeast_) = 0
seq_ck1_ratio <= 0.214
-> class mips_47_03_11_03 "stomach"
Evaluation on training data (2913 items):
at_At1g02920 mips_01_20_35 "glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02930 mips_01_20 "glutathione S-transferase"
mips_01_20_35
mips_01_20_35_01
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02940 mips_01_20_35 ""
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02950 mips_11_07_07 "glutathione S-transferase (GST31)"
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g17170 - mips_01_01_10_05 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_67_01
at_At1g53680 mips_01 "glutathione transferase, putative"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69920 mips_11_07 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g77290 mips_01_20_35 "putative protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78370 mips_11_01 "unknown protein"
mips_11_01_01
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78380 mips_11_07 "glutathione S-transferase like protein"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_10_05
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_04
at_At2g29450 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g30860 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g09270 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g43800 mips_11_07_07 "glutathione transferase-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_33_03_13
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_01_01
Training Accuracy: 13/14 (92.86%)
Training Frequency class 'mips_47_03_11_03': 17/2913 (0.58%)
Evaluation on validation data (1468 items):
at_At1g27140 - mips_01_01_01 "glutathione transferase, putative"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_05_03
mips_67_01
mips_67_01_01
at_At2g02380 - mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
at_At2g02930 mips_01_20_35 "putative glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g02790 - mips_01 "unknown protein"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
mips_98
at_At5g17220 mips_01_20_35 "glutathione S-transferase-like protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
Validation Accuracy: 2/5 (40.00%)
Validation Frequency class 'mips_47_03_11_03': 6/1468 (0.41%)
Evaluation on propertest data (2441 items):
at_At1g17190 mips_11_01_01 "putative glutathione transferase"
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g27130 - mips_01_01 "glutathione transferase, putative"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50_25
at_At1g49860 mips_11_07_07 "glutathione S-transferase, putative"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69930 - mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
at_At1g78340 - mips_01_01_01_11 "GST7 like protein"
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
at_At2g02390 - mips_01_01_01 "glutathione S-transferase like protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_03_01_05
mips_03_01_05_01
mips_11_07
mips_11_07_07
mips_11_07_07_03
at_At2g29440 - mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_45
mips_45_03
mips_45_03_12
at_At2g30870 mips_11_07_07 "glutathione S-transferase (erd13)"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g62760 mips_11_07_07 "Glutathione transferase III-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At4g02520 mips_01_20_35 "Atpm24.1 glutathione S transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
Propertest Accuracy: 5/10 (50.00%)
Propertest Frequency class 'mips_47_03_11_03': 11/2441 (0.45%)
New (unknown) data (1468 items):
at_At2g29460 - mips_20 "putative glutathione S-transferase"
mips_40_04
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
------------------
Rule 988
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
ss(_1,_3,c,_2),c_len(_3,9.0-11.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2) = 0
eval(_1,_2,0.0-9.0e-25),desc(_2,precursor) = 0
eval(_1,_2,8.0e-10-2.0e-5),sq_len(_2,1005.0-6487.0),classification(_2,mus) = 0
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,1574.0-38820.0),species(_2,schizosaccharomyces_pombe__fission_yeast_) = 0
-> class mips_47_03_11_07 "liver"
Evaluation on training data (2913 items):
at_At1g02920 mips_01_20_35 "glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02930 mips_01_20 "glutathione S-transferase"
mips_01_20_35
mips_01_20_35_01
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02940 mips_01_20_35 ""
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02950 mips_11_07_07 "glutathione S-transferase (GST31)"
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g17170 - mips_01_01_10_05 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_67_01
at_At1g53680 mips_01 "glutathione transferase, putative"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g59670 mips_01_01_01_11 "glutathione S-transferase, putative"
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
mips_25_05_13
mips_33_03_13
mips_35_03_17
mips_47_03_11
mips_47_03_11_07
at_At1g59700 - mips_01_01_01_11 "glutathione S-transferase, putative"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
at_At1g69920 mips_11_07 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g77290 mips_01_20_35 "putative protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78320 - mips_01_01 "2,4-D inducible glutathione S-transferase like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
at_At1g78360 mips_01_01_01_11 "hypothetical protein"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_03
mips_47_03_11
mips_47_03_11_07
at_At1g78370 mips_11_01 "unknown protein"
mips_11_01_01
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78380 mips_11_07 "glutathione S-transferase like protein"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_10_05
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_04
at_At2g29450 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g30860 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g09270 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g43800 mips_11_07_07 "glutathione transferase-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_33_03_13
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_01_01
Training Accuracy: 15/18 (83.33%)
Training Frequency class 'mips_47_03_11_07': 63/2913 (2.16%)
Evaluation on validation data (1468 items):
at_At1g27140 - mips_01_01_01 "glutathione transferase, putative"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_05_03
mips_67_01
mips_67_01_01
at_At2g02380 - mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
at_At2g02930 mips_01_20_35 "putative glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g29470 - mips_01_01 "putative glutathione S-transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At2g47730 mips_11_01_01 "glutathione S-transferase (GST6)"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g02790 - mips_01 "unknown protein"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
mips_98
at_At5g17220 mips_01_20_35 "glutathione S-transferase-like protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g41240 - mips_01_01_10_05 "glutathione transferase"
mips_11_07_07
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_62_02_01_01
Validation Accuracy: 3/8 (37.50%)
Validation Frequency class 'mips_47_03_11_07': 31/1468 (2.11%)
Evaluation on propertest data (2441 items):
at_At1g17190 mips_11_01_01 "putative glutathione transferase"
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g27130 - mips_01_01 "glutathione transferase, putative"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50_25
at_At1g49860 mips_11_07_07 "glutathione S-transferase, putative"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69930 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
at_At1g78340 - mips_01_01_01_11 "GST7 like protein"
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
at_At2g02390 - mips_01_01_01 "glutathione S-transferase like protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_03_01_05
mips_03_01_05_01
mips_11_07
mips_11_07_07
mips_11_07_07_03
at_At2g29440 - mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_45
mips_45_03
mips_45_03_12
at_At2g29480 - mips_01 "putative glutathione S-transferase"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_04
mips_98
at_At2g30870 mips_11_07_07 "glutathione S-transferase (erd13)"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g62760 mips_11_07_07 "Glutathione transferase III-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At4g02520 mips_01_20_35 "Atpm24.1 glutathione S transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g41210 - mips_01_01_01_11 "glutathione transferase AtGST 10 (emb|CAA10457.1)"
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_01_20_35
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_03
mips_62_02_01_01
Propertest Accuracy: 6/12 (50.00%)
Propertest Frequency class 'mips_47_03_11_07': 46/2441 (1.88%)
New (unknown) data (1468 items):
at_At2g29460 - mips_20 "putative glutathione S-transferase"
mips_40_04
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
------------------
Rule 981
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
ss(_1,_3,c,_2),c_len(_3,9.0-11.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2) = 0
eval(_1,_2,0.0-9.0e-25),desc(_2,precursor) = 0
eval(_1,_2,8.0e-10-2.0e-5),sq_len(_2,1005.0-6487.0),classification(_2,mus) = 0
eval(_1,_2,9.0e-25-8.0e-10),db_ref(_2,pir),desc(_2,intergenic) = 0
seq_ck1_ratio <= 0.214
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,1574.0-38820.0),species(_2,schizosaccharomyces_pombe__fission_yeast_) = 0
-> class mips_47_03_21_03 "endocrine organ"
Evaluation on training data (2913 items):
at_At1g02920 mips_01_20_35 "glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02930 mips_01_20 "glutathione S-transferase"
mips_01_20_35
mips_01_20_35_01
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02940 mips_01_20_35 ""
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02950 mips_11_07_07 "glutathione S-transferase (GST31)"
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g17170 - mips_01_01_10_05 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_67_01
at_At1g53680 mips_01 "glutathione transferase, putative"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69920 mips_11_07 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g77290 mips_01_20_35 "putative protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78370 mips_11_01 "unknown protein"
mips_11_01_01
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78380 mips_11_07 "glutathione S-transferase like protein"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_10_05
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_04
at_At2g29450 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g30860 mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g09270 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g43800 mips_11_07_07 "glutathione transferase-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_33_03_13
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_01_01
Training Accuracy: 13/14 (92.86%)
Training Frequency class 'mips_47_03_21_03': 22/2913 (0.76%)
Evaluation on validation data (1468 items):
at_At1g27140 - mips_01_01_01 "glutathione transferase, putative"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_05_03
mips_67_01
mips_67_01_01
at_At2g02380 - mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
at_At2g02930 mips_01_20_35 "putative glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g02790 - mips_01 "unknown protein"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
mips_98
at_At5g17220 mips_01_20_35 "glutathione S-transferase-like protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
Validation Accuracy: 2/5 (40.00%)
Validation Frequency class 'mips_47_03_21_03': 6/1468 (0.41%)
Evaluation on propertest data (2441 items):
at_At1g17190 mips_11_01_01 "putative glutathione transferase"
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g27130 - mips_01_01 "glutathione transferase, putative"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50_25
at_At1g49860 mips_11_07_07 "glutathione S-transferase, putative"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69930 - mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
at_At1g78340 - mips_01_01_01_11 "GST7 like protein"
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
at_At2g02390 - mips_01_01_01 "glutathione S-transferase like protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_03_01_05
mips_03_01_05_01
mips_11_07
mips_11_07_07
mips_11_07_07_03
at_At2g29440 - mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_45
mips_45_03
mips_45_03_12
at_At2g30870 mips_11_07_07 "glutathione S-transferase (erd13)"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g62760 mips_11_07_07 "Glutathione transferase III-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At4g02520 mips_01_20_35 "Atpm24.1 glutathione S transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
Propertest Accuracy: 5/10 (50.00%)
Propertest Frequency class 'mips_47_03_21_03': 14/2441 (0.57%)
New (unknown) data (1468 items):
at_At2g29460 - mips_20 "putative glutathione S-transferase"
mips_40_04
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
------------------
Rule 271
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),fprintscan(_orf_0,_fprintscan_id_3,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_4,_ipr_2) = 1
scop_c.69 <= 5.3e-09
-> class mips_62_02_01_01 "enzyme activator"
Evaluation on training data (2913 items):
at_At1g73290 mips_06_01 "putative serine carboxypeptidase"
mips_06_04
mips_06_07_11
mips_06_10
mips_06_13
mips_40_07
mips_40_25
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_67
at_At1g73300 mips_06_07_11 "putative serine carboxypeptidase"
mips_40_25
mips_62_02_01_01
at_At2g24010 mips_06_07_11 "putative serine carboxypeptidase II"
mips_40_25
mips_62_02_01_01
at_At2g35770 mips_06_01 "putative serine carboxypeptidase II"
mips_06_04
mips_06_07
mips_06_07_11
mips_06_10
mips_06_13
mips_40_07
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
at_At3g07990 mips_06_01 "putative serine carboxypeptidase II"
mips_06_04
mips_06_07
mips_06_07_11
mips_06_10
mips_06_13
mips_40_07
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
at_At3g25420 mips_40_25 "serine carboxypeptidase, putative"
mips_62_02_01_01
at_At3g52010 mips_06_01 "serine-type carboxypeptidase-like protein"
mips_06_04
mips_06_07
mips_06_07_11
mips_06_10
mips_06_13
mips_40_07
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_67
at_At4g12910 mips_62_02_01_01 "SERINE CARBOXYPEPTIDASE I PRECURSOR-like protein"
at_At4g15100 mips_06_07_11 "hydroxynitrile lyase like protein"
mips_40_25
mips_62_02_01_01
at_At4g30810 mips_06_07_11 "serine carboxypeptidase II like protein"
mips_40_25
mips_62_02_01_01
at_At5g08260 mips_40_07 "serine-type carboxypeptidase II-like protein"
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
at_At5g23210 mips_06 "serine carboxypeptidase II-like protein"
mips_06_07_11
mips_40_25
mips_62_02_01_01
mips_67
Training Accuracy: 12/12 (100.00%)
Training Frequency class 'mips_62_02_01_01': 117/2913 (4.02%)
Evaluation on validation data (1468 items):
at_At1g43780 mips_06_07_11 "serine carboxypeptidase II, putative"
mips_40_25
mips_62_02_01_01
at_At3g52020 mips_06_01 "serine-type carboxypeptidase-like protein"
mips_06_07_11
mips_06_10
mips_40_07
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
at_At5g09640 mips_06_07_11 "carboxypeptidase like protein"
mips_40_25
mips_62_02_01_01
Validation Accuracy: 3/3 (100.00%)
Validation Frequency class 'mips_62_02_01_01': 63/1468 (4.29%)
Evaluation on propertest data (2441 items):
at_At1g15000 - mips_06_13_04 "serine carboxypeptidase precursor, putative"
mips_40_25
mips_62_02_01_02
at_At1g33540 mips_06_04 "serine carboxypeptidase, putative"
mips_06_13
mips_40_07
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_67
at_At2g05850 mips_06_07_11 "putative serine carboxypeptidase II"
mips_40_25
mips_62_02_01_01
at_At2g27920 mips_06_01 "putative carboxypeptidase"
mips_06_04
mips_06_13
mips_06_13_04
mips_06_13_04_02
mips_40_07
mips_40_09
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_02
mips_67
at_At2g35780 mips_06_01 "putative serine carboxypeptidase II"
mips_06_07_11
mips_06_10
mips_40_25
mips_62_02_01
mips_62_02_01_01
at_At3g12220 mips_06_01 "hypothetical protein"
mips_06_04
mips_06_07
mips_06_07_11
mips_06_10
mips_06_13
mips_40_07
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
at_At3g63470 mips_06_07_11 "serin carboxypeptidase - like protein"
mips_40_25
mips_62_02_01_01
at_At5g36180 mips_06_01 "serine carboxypeptidase"
mips_06_07_11
mips_06_10
mips_40_07
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
Propertest Accuracy: 7/8 (87.50%)
Propertest Frequency class 'mips_62_02_01_01': 95/2441 (3.89%)
New (unknown) data (1468 items):
at_At1g11080 - mips_06 "Serine carboxypeptidase isolog"
mips_06_13
at_At1g28110 - no entry null
at_At1g61130 - mips_06 ""
mips_06_13
at_At1g73270 - mips_06_01 "putative serine carboxypeptidase"
mips_06_07
mips_06_07_11
mips_06_10
mips_06_13
mips_40_25
at_At1g73280 - mips_06_01 "putative serine carboxypeptidase"
mips_06_07_11
mips_06_10
mips_40_25
at_At1g73310 - no entry null
at_At2g22920 - no entry null
at_At2g22970 - mips_06_13 "putative serine carboxypeptidase II"
at_At2g22980 - no entry null
at_At2g22990 - mips_06_07_11 "putative serine carboxypeptidase I"
mips_40_25
at_At2g23000 - no entry null
at_At2g23010 - mips_06_13 "putative serine carboxypeptidase I"
at_At2g24000 - no entry null
at_At2g33530 - no entry null
at_At3g10410 - mips_06_13_04 "putative serine carboxypeptidase precursor"
mips_40_25
at_At3g10450 - no entry null
at_At3g12203 - mips_06_07_11 "serine carboxypeptidase, putative"
mips_40_25
at_At3g12230 - mips_06_07_11 "hypothetical protein"
mips_40_25
at_At3g12240 - no entry null
at_At3g17180 - mips_06_13 "putative serine carboxypeptidase II"
at_At3g45010 - mips_06_13_04 "carboxypeptidase precursor-like protein"
mips_40_25
at_At3g52000 - mips_06_07_11 "serine-type carboxypeptidase like protein"
mips_40_25
at_At3g56540 - mips_06 "serine carboxypeptidase-like protein"
mips_06_13
at_At4g30610 - mips_06_07_11 "SERINE CARBOXYPEPTIDASE II-like protein"
mips_40_25
at_At5g22960 - no entry null
at_At5g22980 - mips_06_13_04 "serine carboxypeptidase"
mips_40_25
at_At5g42230 - no entry null
at_At5g42240 - no entry null
------------------
Rule 1506
scop_c <= 0.02
hmmsmart_s_tkc(_orf_0,_hmmsmart_id_1),ipr_Protein_kinase(_orf_0,_ipr_2),hmmsmart_tyrkc(_orf_0,_hmmsmart_id_3) = 1
-> class mips_01_01_01_11 "biosynthesis of the cysteine-aromatic group"
Evaluation on training data (2913 items):
at_At2g19410 mips_01_01_01_11 "putative protein kinase"
at_At3g13690 mips_01_01_01_11 "protein kinase, putative"
mips_06_07_03
mips_10_01_05_01
at_At4g25160 mips_01_01_01 "putative Ser/Thr protein kinase"
mips_01_01_01_11
at_At5g12000 mips_01_01_01_11 "putative receptor - like kinase"
at_At5g26150 mips_01_01_01_11 "putative protein"
Training Accuracy: 5/5 (100.00%)
Training Frequency class 'mips_01_01_01_11': 121/2913 (4.15%)
Evaluation on validation data (1468 items):
at_At1g16760 mips_01_01_01_11 "hypothetical protein"
at_At2g24370 mips_01_01_01 "putative protein kinase"
mips_01_01_01_11
at_At2g45910 mips_01_01_01 "putative protein kinase"
mips_01_01_01_11
mips_06_07_03
mips_13_11
mips_62_01_01
mips_63_19_03
at_At5g61550 mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_10_01
mips_10_01_01
mips_10_05
at_At5g61560 mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_10_01
mips_10_01_01
mips_10_05
Validation Accuracy: 5/5 (100.00%)
Validation Frequency class 'mips_01_01_01_11': 74/1468 (5.04%)
Evaluation on propertest data (2441 items):
at_At1g17540 mips_01_01 "protein kinase, putative"
mips_01_01_01
mips_01_01_01_11
mips_10_01
mips_10_01_01
mips_10_05
at_At1g55200 - mips_06_07_03 "protein kinase, putative"
mips_10_01_05_01
at_At1g72760 mips_01_01_01_11 "putative protein kinase"
at_At1g78940 mips_01_01_01_11 "hypothetical protein"
at_At5g35380 - mips_14_04_03_01 "putative protein"
Propertest Accuracy: 3/5 (60.00%)
Propertest Frequency class 'mips_01_01_01_11': 102/2441 (4.18%)
New (unknown) data (1468 items):
at_At1g04210 - mips_08_13 "unknown protein"
mips_11_05_01
at_At1g05700 - mips_10_05 "putative light repressible receptor protein kinase"
mips_40_02
at_At1g06840 - no entry null
at_At1g07550 - no entry null
at_At1g07650 - no entry null
at_At1g08590 - mips_10 "putative receptor kinase, CLV1"
at_At1g09970 - mips_08_13 "leucine-rich repeat receptor-like kinase At1g09970"
at_At1g12460 - mips_06 "hypothetical protein"
mips_06_04
mips_08
mips_08_13
mips_10
mips_10_01
mips_10_01_01
mips_10_05
at_At1g14390 - no entry null
at_At1g17230 - mips_08_13 "putative leucine-rich receptor protein kinase"
at_At1g17750 - mips_08_13 "hypothetical protein"
mips_11_05_01
at_At1g21590 - mips_10 "unknown protein"
mips_10_01
mips_10_01_01
at_At1g24650 - no entry null
at_At1g25320 - no entry null
at_At1g27190 - no entry null
at_At1g28440 - mips_08_13 "hypothetical protein"
at_At1g29730 - mips_06_04 "Putative receptor-like serine/threonine kinase"
mips_08
mips_08_13
mips_11_05
mips_11_05_01
at_At1g29740 - mips_08_13 "Putative receptor-like serine/threonine kinase"
mips_11_05_01
at_At1g29750 - no entry null
at_At1g31420 - no entry null
at_At1g34110 - mips_06 "putative protein"
mips_06_04
mips_08
mips_08_13
mips_10
mips_10_01
mips_10_01_01
mips_11
mips_11_05
mips_11_05_01
at_At1g34210 - no entry null
at_At1g35710 - mips_08_13 "protein kinase, putative"
at_At1g48480 - mips_10_05 "protein kinase, putative"
at_At1g49100 - no entry null
at_At1g49180 - mips_01_04 "similar to MAP/ERK kinase kinase 3 gi|4505153"
mips_13_03
mips_13_03_01
mips_14_01
at_At1g50610 - no entry null
at_At1g51790 - no entry null
at_At1g51800 - mips_10_01 "hypothetical protein"
mips_10_01_01
mips_10_05
mips_40_02
at_At1g51810 - no entry null
at_At1g51820 - mips_10_05 "Putative protein kinase"
mips_40_02
at_At1g51830 - no entry null
at_At1g51850 - mips_10_05 "Putative protein kinase"
mips_40_02
at_At1g51860 - mips_10_05 "Putative protein kinase"
mips_40_02
at_At1g51880 - mips_10_01 "Putative protein kinase"
mips_10_01_01
mips_10_05
mips_40_02
at_At1g51890 - no entry null
at_At1g53420 - no entry null
at_At1g53430 - mips_08_13 "receptor-like serine/threonine kinase, putative"
at_At1g53440 - mips_08_13 "receptor-like serine/threonine kinase, putative"
at_At1g55610 - mips_10_05 "receptor kinase, putative"
mips_11_05
mips_11_05_01
mips_14_01
mips_14_01_03
at_At1g56120 - mips_06_04 "receptor-like protein kinase, putative"
mips_08
mips_08_13
mips_10_05
mips_11_05
mips_11_05_01
at_At1g56130 - mips_08_13 "receptor-like protein kinase, putative"
at_At1g56140 - no entry null
at_At1g60630 - no entry null
at_At1g60800 - no entry null
at_At1g62090 - no entry null
at_At1g62950 - mips_10_05 "protein kinase, putative"
at_At1g63430 - no entry null
at_At1g64210 - mips_10_01 "hypothetical protein"
mips_10_01_01
mips_10_05
at_At1g66150 - no entry null
at_At1g66830 - mips_06_04 "hypothetical protein"
mips_08
mips_08_13
mips_10_01
mips_10_01_01
mips_10_05
mips_11
mips_11_05
mips_11_05_01
at_At1g67510 - mips_10 "putative receptor protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
at_At1g67720 - mips_10 "putative receptor protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
mips_40_02
at_At1g68400 - no entry null
at_At1g69270 - no entry null
at_At1g69990 - no entry null
at_At1g71830 - mips_10 "protein kinase, putative"
mips_10_01
mips_10_01_01
at_At1g72180 - no entry null
at_At1g72300 - mips_08_13 "leucine-rich receptor-like protein kinase, putative"
mips_11_05_01
at_At1g72460 - no entry null
at_At1g73080 - no entry null
at_At1g74360 - mips_08_13 "putative receptor protein kinase (At1g74360)"
at_At1g75640 - no entry null
at_At1g75820 - no entry null
at_At1g77280 - no entry null
at_At1g78980 - no entry null
at_At1g79620 - mips_10 "hypothetical protein"
mips_10_01_01
at_At2g01210 - no entry null
at_At2g01820 - mips_14_01_03 "putative receptor-like protein kinase"
at_At2g01950 - mips_08_13 "putative receptor protein kinase"
mips_14_01_03
at_At2g02220 - mips_06_04 "putative receptor-like protein kinase"
mips_08_13
mips_11_05
mips_11_05_01
at_At2g02780 - no entry null
at_At2g04300 - no entry null
at_At2g07020 - no entry null
at_At2g07040 - no entry null
at_At2g13790 - mips_10_01 "putative receptor protein kinase (F13J11.14/At2g13790)"
mips_10_01_01
at_At2g13800 - mips_10_05 "putative receptor-like protein kinase"
mips_40_02
at_At2g14440 - no entry null
at_At2g14510 - no entry null
at_At2g15300 - no entry null
at_At2g16250 - mips_10_01 "putative LRR receptor protein kinase"
mips_10_01_01
mips_10_05
at_At2g19190 - no entry null
at_At2g19210 - mips_10 "putative receptor-like protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
mips_40
mips_40_02
mips_99
at_At2g19230 - no entry null
at_At2g20850 - no entry null
at_At2g23300 - no entry null
at_At2g23950 - mips_10_01_01 "putative LRR receptor protein kinase"
at_At2g24130 - mips_08_13 "putative receptor-like protein kinase"
at_At2g24230 - no entry null
at_At2g25790 - no entry null
at_At2g26330 - no entry null
at_At2g26730 - mips_10_05 "putative receptor-like protein kinase"
at_At2g27060 - no entry null
at_At2g28960 - no entry null
at_At2g28970 - no entry null
at_At2g28990 - no entry null
at_At2g31880 - no entry null
at_At2g33170 - mips_08_13 "putative receptor-like protein kinase"
mips_11_05_01
at_At2g35620 - no entry null
at_At2g36570 - mips_10 "putative receptor-like protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
mips_99
at_At2g41820 - no entry null
at_At2g42290 - no entry null
at_At2g45340 - no entry null
at_At3g08680 - no entry null
at_At3g13065 - mips_08_13 "putative protein kinase, 3' partial"
at_At3g13380 - mips_08_13 "brassinosteroid receptor kinase, putative"
mips_11_05_01
mips_14_01
mips_14_01_03
at_At3g14350 - no entry null
at_At3g14840 - mips_11_05_01 "receptor-like serine/threonine kinase, putative"
at_At3g17840 - no entry null
at_At3g19700 - mips_10_05 "receptor-like protein kinase, putative"
at_At3g21340 - mips_10_01 "serine/threonine-specific protein kinase, putative"
mips_10_01_01
mips_10_05
mips_40_02
at_At3g23000 - no entry null
at_At3g23750 - mips_08_13 "receptor-like kinase, putative"
at_At3g24240 - mips_14_01_03 "receptor kinase, putative"
at_At3g24660 - no entry null
at_At3g25560 - mips_10 "unknown protein"
mips_10_01
mips_10_01_01
mips_10_05
mips_99
at_At3g28040 - no entry null
at_At3g28450 - mips_10 "receptor kinase, putative"
mips_10_01
mips_10_01_01
mips_10_05
mips_40
mips_40_02
at_At3g42880 - no entry null
at_At3g46330 - no entry null
at_At3g46340 - no entry null
at_At3g46350 - mips_10_01 "receptor-like protein kinase homolog"
mips_10_01_01
at_At3g46370 - no entry null
at_At3g46400 - no entry null
at_At3g46420 - no entry null
at_At3g47090 - mips_11_05_01 "receptor kinase-like protein"
at_At3g47110 - no entry null
at_At3g47570 - no entry null
at_At3g47580 - no entry null
at_At3g49060 - no entry null
at_At3g49670 - no entry null
at_At3g50230 - mips_10 "receptor protein kinase -like protein"
mips_10_01_01
at_At3g51740 - no entry null
at_At3g53590 - mips_10 "receptor protein kinase -like protein"
mips_10_01
mips_10_01_01
mips_10_05
at_At3g56100 - mips_14_01_03 "putative protein"
at_At3g56370 - mips_08_13 "putative protein"
at_At3g57830 - mips_08_13 "receptor-like protein kinase"
mips_11_05_01
at_At3g59410 - no entry null
at_At4g03390 - no entry null
at_At4g08850 - mips_06 "receptor protein kinase like protein"
mips_08_13
mips_10
mips_10_01_01
mips_11_05
mips_11_05_01
at_At4g12020 - mips_11_01 "putative disease resistance protein"
mips_11_05
mips_11_05_01
mips_11_05_03
at_At4g18640 - mips_10 "putative protein (fragment)"
mips_10_01_01
at_At4g20140 - mips_06_04 "leucine rich repeat-like protein"
mips_08
mips_08_13
mips_10_05
mips_11_05
mips_11_05_01
at_At4g20270 - mips_06_04 "CLV1 receptor kinase like protein"
mips_08_13
at_At4g20450 - mips_10 "receptor protein kinase - like protein"
mips_10_01
mips_10_01_01
mips_10_05
mips_40
mips_40_02
mips_99
at_At4g20940 - no entry null
at_At4g22730 - no entry null
at_At4g23740 - mips_10_05 "putative receptor kinase"
at_At4g26540 - no entry null
at_At4g28490 - no entry null
at_At4g28650 - no entry null
at_At4g29180 - no entry null
at_At4g29450 - no entry null
at_At4g29990 - no entry null
at_At4g30520 - no entry null
at_At4g31250 - mips_10_05 "receptor kinase - like protein"
at_At4g33430 - no entry null
at_At4g34220 - no entry null
at_At4g36180 - mips_08_13 "putative receptor protein kinase"
mips_14_01_03
at_At4g37250 - no entry null
at_At4g39270 - mips_11_05_01 "receptor protein kinase - like protein"
at_At4g39400 - mips_08_13 "brassinosteroid insensitive 1 gene (BRI1)"
mips_11_05_01
at_At5g01890 - no entry null
at_At5g01950 - no entry null
at_At5g05160 - no entry null
at_At5g06820 - mips_11_05_01 "receptor-like protein kinase"
at_At5g06940 - mips_08_13 "receptor protein kinase-like protein"
mips_11_05_01
at_At5g07150 - no entry null
at_At5g07180 - no entry null
at_At5g07280 - mips_08_13 "receptor-like protein kinase-like protein"
at_At5g10020 - mips_06_04 "receptor protein kinase -like(fragment)"
mips_08
mips_08_13
mips_10_01
mips_10_01_01
mips_10_05
mips_11
mips_11_05
mips_11_05_01
at_At5g10290 - no entry null
at_At5g14210 - no entry null
at_At5g16000 - no entry null
at_At5g16590 - mips_10 "receptor-like protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
at_At5g16900 - no entry null
at_At5g20480 - mips_11_05_01 "receptor protein kinase - like"
at_At5g20690 - no entry null
at_At5g24100 - no entry null
at_At5g25930 - mips_08_13 "receptor-like protein kinase - like"
mips_11_05_01
at_At5g35390 - mips_10 "putative receptor-like protein kinase"
mips_10_01
mips_10_01_01
at_At5g37450 - no entry null
at_At5g39390 - mips_10 "receptor protein kinase -like protein"
mips_10_01_01
at_At5g41180 - no entry null
at_At5g43020 - no entry null
at_At5g44700 - mips_06_04 "receptor-like protein kinase"
mips_08
mips_08_13
mips_10_01
mips_10_01_01
mips_10_05
mips_11
mips_11_05
mips_11_05_01
at_At5g45780 - no entry null
at_At5g45800 - mips_08_13 "receptor kinase-like protein"
at_At5g45840 - mips_08_13 "receptor protein kinase-like protein"
at_At5g46330 - mips_06_04 "receptor protein kinase"
mips_08
mips_08_13
mips_10_01
mips_10_01_01
mips_10_05
mips_11
mips_11_05
mips_11_05_01
at_At5g48380 - no entry null
at_At5g48740 - no entry null
at_At5g48940 - mips_08_13 "receptor protein kinase-like protein"
at_At5g49660 - no entry null
at_At5g49760 - no entry null
at_At5g49770 - mips_06_04 "receptor protein kinase-like"
mips_08_13
mips_10_01_01
mips_11_05
mips_11_05_01
at_At5g49780 - mips_08_13 "receptor protein kinase-like"
mips_11_05_01
at_At5g51270 - mips_01_01_01 "putative protein"
at_At5g51350 - no entry null
at_At5g51560 - no entry null
at_At5g53320 - no entry null
at_At5g53890 - mips_14_01 "receptor protein kinase-like protein"
mips_14_01_03
at_At5g56040 - mips_08_13 "receptor protein kinase-like protein"
at_At5g56790 - no entry null
at_At5g58150 - mips_10 "receptor-like protein kinase"
mips_10_01
mips_10_01_01
at_At5g58300 - no entry null
at_At5g59650 - no entry null
at_At5g59660 - no entry null
at_At5g59670 - no entry null
at_At5g59680 - no entry null
at_At5g61480 - no entry null
at_At5g62230 - no entry null
at_At5g62710 - no entry null
at_At5g63410 - no entry null
at_At5g63710 - no entry null
at_At5g63930 - mips_08_13 "receptor-like protein kinase"
mips_11_05_01
at_At5g63940 - mips_10_05 "putative protein"
at_At5g65240 - mips_10 "receptor-like protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
mips_40
mips_40_02
at_At5g65700 - mips_10 "receptor protein kinase-like protein"
mips_10_01
mips_10_01_01
mips_10_05
mips_98
at_At5g65710 - mips_08_13 "receptor protein kinase-like protein"
at_At5g67200 - no entry null
at_At5g67280 - mips_08_13 "receptor-like protein kinase"
------------------
Rule 989
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 1
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
ss(_1,_3,b,_2),ss(_1,_5,a,_4),notequal(_5,_3),notequal(_5,_2),notequal(_4,_3),notequal(_4,_2),c_len(_4,6.0-9.0),ss(_1,_4,c,_6),notequal(_6,_4),notequal(_6,_5),notequal(_6,_3),notequal(_6,_2) = 1
eval(_1,_2,0.0-9.0e-25),classification(_2,poaceae),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,1574.0-38820.0),species(_2,schizosaccharomyces_pombe__fission_yeast_) = 0
-> class mips_01_01_01_11 "biosynthesis of the cysteine-aromatic group"
Evaluation on training data (2913 items):
at_At1g02920 - mips_01_20_35 "glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02930 - mips_01_20 "glutathione S-transferase"
mips_01_20_35
mips_01_20_35_01
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02940 - mips_01_20_35 ""
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g02950 - mips_11_07_07 "glutathione S-transferase (GST31)"
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g10360 mips_01_01_01_11 "putative glutathione S-transferase TSI-1"
mips_05_04_02
mips_05_07
mips_05_10
mips_05_99
mips_11_07_07
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
at_At1g17170 - mips_01_01_10_05 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_67_01
at_At1g37130 mips_01_01_01_07 "nitrate reductase (At1g37130)"
mips_01_01_01_11
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_05_01
mips_01_01_10_05_02
mips_30_27
mips_30_27_01
at_At1g53680 mips_01 "glutathione transferase, putative"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g59670 mips_01_01_01_11 "glutathione S-transferase, putative"
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
mips_25_05_13
mips_33_03_13
mips_35_03_17
mips_47_03_11
mips_47_03_11_07
at_At1g59700 mips_01_01_01_11 "glutathione S-transferase, putative"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
at_At1g69920 - mips_11_07 "putative glutathione transferase"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g72810 mips_01_01_01_07 "hypothetical protein"
mips_01_01_01_07_03
mips_01_01_01_11
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At1g77290 - mips_01_20_35 "putative protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g77760 mips_01_01 "nitrate reductase 1 (NR1)"
mips_01_01_01
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_05_01
mips_01_01_10_05_02
mips_02
mips_02_11
mips_30
mips_30_27
mips_30_27_01
mips_40_16
at_At1g78320 mips_01_01 "2,4-D inducible glutathione S-transferase like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
at_At1g78360 mips_01_01_01_11 "hypothetical protein"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_03
mips_47_03_11
mips_47_03_11_07
at_At1g78370 - mips_11_01 "unknown protein"
mips_11_01_01
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g78380 - mips_11_07 "glutathione S-transferase like protein"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_10_05
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_04
at_At2g29450 - mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g30860 - mips_11_07_07 "glutathione S-transferase"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g09270 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g10050 mips_01_01_01_11 "threonine dehydratase/deaminase (OMR1)"
mips_01_01_01_11_01
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_20_25_03
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
at_At3g43800 - mips_11_07_07 "glutathione transferase-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_33_03_13
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
mips_67_01
mips_67_01_01
at_At3g59760 mips_01_01_01_11 "cysteine synthase"
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
at_At3g61440 mips_01_01 "cysteine synthase (AtcysC1)"
mips_01_01_01
mips_01_01_01_11
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_40_16
at_At4g11640 mips_01_01_01_11 "putative protein"
mips_01_01_01_11_01
mips_01_01_01_15
mips_01_01_01_15_02
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_07
mips_01_20_19
mips_01_20_21
mips_20_25_03
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
at_At4g14880 mips_01_01_01_11 "cytosolic O-acetylserine(thiol)lyase (EC 4.2.99.8)"
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
at_At5g28030 mips_01_01_01_11 "cysteine synthase - like"
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
at_At5g33280 - mips_08_99 "chloride channel-like protein"
mips_13_01_03
mips_13_01_03_05
mips_43
mips_43_03
mips_45_03_17
mips_45_03_99
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_47_03_99
mips_67_01
mips_67_01_01
mips_67_04_07
at_At5g44000 - mips_11_05 "putative protein"
mips_11_07_07
mips_11_07_07_03
at_At5g54810 mips_01_01_01_07 "tryptophan synthase beta chain 1 precursor (sp|P14671)"
mips_01_01_01_11
mips_01_01_01_11_13
mips_01_01_10_03
mips_01_01_10_05
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
Training Accuracy: 17/31 (54.84%)
Training Frequency class 'mips_01_01_01_11': 121/2913 (4.15%)
Evaluation on validation data (1468 items):
at_At1g10370 mips_01_01_01_11 "glutathione S-transferase (GST30b)"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_20_25_07
mips_20_25_07_03
at_At1g27140 - mips_01_01_01 "glutathione transferase, putative"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_05_03
mips_67_01
mips_67_01_01
at_At1g55880 mips_01_01_01_07 "hypothetical protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At1g74590 mips_01_01 "glutathione S-transferase like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
at_At2g02380 mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10_05
mips_01_01_10_05_05
mips_11_07_07
mips_11_07_07_03
at_At2g02930 - mips_01_20_35 "putative glutathione S-transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g29470 mips_01_01 "putative glutathione S-transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At2g43750 mips_01_01_01_11 "cysteine synthase (cpACS1)"
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_17
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At2g47730 - mips_11_01_01 "glutathione S-transferase (GST6)"
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g02790 mips_01 "unknown protein"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
mips_98
at_At5g17220 - mips_01_20_35 "glutathione S-transferase-like protein"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At5g20840 - mips_01_20_01 "putative protein"
mips_08_07_22
mips_08_16
mips_10_01_09
mips_13_03
mips_13_03_01
mips_13_11_03
mips_13_11_03_07
mips_30_02
mips_30_09
mips_40_09
mips_43
mips_43_03
mips_43_03_13
mips_47
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
at_At5g28020 mips_01_01 "cysteine synthase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_01_11_03
mips_01_01_10
mips_01_01_10_05
mips_01_02
mips_01_02_01
at_At5g38530 mips_01_01_01 "tryptophan synthase beta chain"
mips_01_01_01_07
mips_01_01_01_07_03
mips_01_01_01_11
mips_01_01_01_11_13
mips_01_01_10_03
mips_01_01_10_05
mips_01_20_17
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At5g41240 - mips_01_01_10_05 "glutathione transferase"
mips_11_07_07
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_62_02_01_01
Validation Accuracy: 9/15 (60.00%)
Validation Frequency class 'mips_01_01_01_11': 74/1468 (5.04%)
Evaluation on propertest data (2441 items):
at_At1g17180 - mips_05 "putative glutathione transferase"
mips_05_04
mips_05_04_02
mips_05_07
mips_05_10
mips_05_99
mips_06_01
mips_06_10
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_40_07
at_At1g17190 - mips_11_01_01 "putative glutathione transferase"
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g27130 mips_01_01 "glutathione transferase, putative"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10_05
mips_67
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50_25
at_At1g49860 - mips_11_07_07 "glutathione S-transferase, putative"
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At1g69930 mips_01_01 "putative glutathione transferase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_11_01
mips_11_01_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_07
mips_11_07_07_03
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
at_At1g78340 mips_01_01_01_11 "GST7 like protein"
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
at_At2g02390 mips_01_01_01 "glutathione S-transferase like protein"
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_03_01_05
mips_03_01_05_01
mips_11_07
mips_11_07_07
mips_11_07_07_03
at_At2g29420 mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At2g29440 mips_01_01_01_11 "putative glutathione S-transferase"
mips_01_01_10
mips_01_01_10_05
mips_11_01_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_20_25_07
mips_20_25_07_03
mips_45
mips_45_03
mips_45_03_12
at_At2g29480 mips_01 "putative glutathione S-transferase"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_11
mips_11_05
mips_11_05_03
mips_20
mips_40_03
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_04
mips_98
at_At2g30870 - mips_11_07_07 "glutathione S-transferase (erd13)"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g22460 mips_01_01_01 "unknown protein"
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10_03
mips_01_01_10_05
mips_01_20_17
mips_01_20_19
mips_01_20_21
mips_40_16
mips_63_21
mips_63_21_17
at_At3g62760 - mips_11_07_07 "Glutathione transferase III-like protein"
mips_11_07_07_01
mips_11_07_07_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At4g02520 - mips_01_20_35 "Atpm24.1 glutathione S transferase"
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_01
mips_11_07_07_03
mips_25_05_13
mips_45
mips_45_03
mips_45_03_12
mips_47_03_07
mips_47_03_07_01
mips_47_03_11
mips_47_03_11_03
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At4g27070 mips_01_01_01_07 "tryptophan synthase beta-subunit (TSB2)"
mips_01_01_01_11
mips_01_01_01_11_13
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_02
mips_01_02_01
mips_01_20_19
mips_01_20_21
mips_63_21
mips_63_21_17
at_At4g29840 mips_01_01_01 "threonine synthase"
mips_01_01_01_07
mips_01_01_01_07_03
mips_01_01_01_11
mips_01_01_01_11_13
mips_01_01_10_03
mips_01_01_10_05
at_At5g27200 - mips_01_06_01 "acyl carrier protein precursor - like"
mips_01_20_05
mips_01_20_05_11
mips_67_04
mips_67_13
mips_67_15
at_At5g41210 mips_01_01_01_11 "glutathione transferase AtGST 10 (emb|CAA10457.1)"
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_01_20_35
mips_01_20_35_01
mips_11_07_07
mips_11_07_07_03
mips_62_02_01_01
at_At5g41220 - mips_11_07_07 "glutathione transferase-like"
mips_11_07_07_03
Propertest Accuracy: 11/19 (57.89%)
Propertest Frequency class 'mips_01_01_01_11': 102/2441 (4.18%)
New (unknown) data (1468 items):
at_At1g01900 - mips_06_13 "hypothetical protein"
at_At1g04110 - no entry null
at_At1g05350 - mips_01_07 "unknown protein"
mips_01_07_01
mips_06_07_07
mips_30_25
mips_40_25
mips_67_50
mips_67_50_25
at_At1g09640 - mips_05_04_02 "unknown protein"
mips_05_07
mips_05_10
mips_05_99
at_At1g12560 - mips_40_01 "hypothetical protein"
at_At1g20190 - mips_40_01 "expansin S2 precursor like protein"
at_At1g26340 - mips_01_06_99 "cytochrome b5 like protein"
mips_02_11_05
at_At1g26770 - mips_30_01 "expansin 10"
mips_40_01
at_At1g54580 - mips_01_06_01 "unknown protein"
mips_02_11
mips_02_11_05
mips_63_09
mips_67_04
mips_67_15
at_At1g54630 - mips_02 "unknown protein"
mips_01_06
mips_01_06_01
mips_02_11
mips_02_11_05
mips_40_16
mips_63_09
mips_67_04
mips_67_15
at_At1g57720 - mips_05_04_02 "unknown protein"
mips_05_07
mips_05_10
mips_05_99
at_At1g60660 - mips_02_11_05 "Putative Cytochrome B5"
mips_67_15
at_At1g62980 - mips_40_01 "expansin At-EXP6, putative"
at_At1g65290 - mips_02_11_05 "unknown protein"
mips_25_05_25
mips_63_09
mips_67_13
at_At1g69530 - mips_30_01 "expansin-like protein"
mips_40_01
at_At1g75270 - mips_05_10 "GSH-dependent dehydroascorbate reductase 1, putative"
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
at_At2g03090 - mips_30_01 "expansin like protein"
mips_40_01
at_At2g03340 - no entry null
at_At2g20750 - mips_40_01 "beta-expansin"
at_At2g26920 - no entry null
at_At2g28950 - mips_40_01 "putative expansin"
at_At2g29460 - mips_20 "putative glutathione S-transferase"
mips_40_04
mips_40_10_05
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
at_At2g29490 - mips_40_10_05 "putative glutathione S-transferase"
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04_07
mips_67_50_25
at_At2g32720 - mips_02_11_05 "putative cytochrome b5"
mips_02_13
at_At2g37640 - mips_30_01 "putative expansin"
mips_40_01
at_At2g39700 - mips_40_01 "putative expansin"
at_At2g40610 - mips_40_01 "putative expansin"
at_At2g45110 - mips_30_01 "putative beta-expansin"
mips_40_01
at_At2g46210 - mips_01_06_99 "putative fatty acid desaturase/cytochrome b5 fusion protein"
at_At3g29030 - mips_40_01 "expansin At-EXP5"
at_At3g45960 - no entry null
at_At3g45970 - no entry null
at_At3g55500 - mips_40_01 "expansin-like protein"
at_At3g60570 - mips_30_01 "putative protein"
at_At4g01630 - mips_30 "putative expansin"
mips_30_01
mips_40_01
mips_98
at_At4g27670 - mips_06_01 "heat shock protein 21"
at_At4g28250 - mips_30 "putative beta-expansin/allergen protein"
mips_98
at_At4g38210 - mips_30_01 "expansin -like protein"
mips_40_01
at_At4g38400 - no entry null
at_At5g02260 - mips_40_01 "expansin precursor - like protein"
at_At5g05290 - mips_40_01 "expansin At-EXP2 (gb|AAB38073.1)"
at_At5g12120 - no entry null
at_At5g16710 - no entry null
at_At5g21150 - mips_05_04_01 "zwille/pinhead-like protein"
mips_05_07
mips_63_03_03
at_At5g39260 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g39270 - mips_30 "expansin-like protein"
mips_40_01
mips_98
at_At5g39280 - mips_40_01 "expansin-like protein"
at_At5g39290 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g39300 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g39310 - mips_30_01 "expansin-like protein"
mips_40_01
at_At5g45900 - mips_01_07 "autophagy 7 (AtAPG7)"
mips_01_07_01
mips_06_07_07
mips_30_25
mips_40_25
mips_67_50
mips_67_50_25
at_At5g47630 - mips_01_06_01 "acyl carrier protein-like"
mips_02_11
mips_02_11_05
mips_25_05_25
mips_63_09
mips_67_04
mips_67_13
mips_67_15
at_At5g48810 - mips_02 "cytochrome b5 (dbj|BAA74840.1)"
mips_01_06
mips_01_06_01
mips_02_11
mips_02_11_05
mips_40_16
mips_67_04
mips_67_15
at_At5g53560 - mips_01_06_01 "cytochrome b5 (dbj|BAA74839.1)"
mips_01_06_99
mips_02_11
mips_67_04
mips_67_15
at_At5g56320 - mips_40_01 "expansin"
at_At5g67360 - no entry null
------------------
Rule 1570
ipr_RNA-binding_region_RNP-1___RNA_recognition_motif_(_orf_0,_ipr_1) = 1
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 1
ss(_1,_3,b,_2),c_len(_2,11.0-15.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),a_len(_4,11.0-15.0) = 0
seq_if2_ratio <= 0.556
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_4,a,_5),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3),alpha_dist(_1,45.54-101.0) = 0
ss(_1,_3,b,_2),b_len(_3,1.0-3.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),a_len(_4,15.0-30.0) = 0
seq_ew10_ratio <= 0.599
seq_ta5_ratio <= 1.055
seq_cc7_ratio <= 0.215
seq_ks10_ratio <= 1.587
ss(_1,_3,c,_2),c_len(_3,11.0-15.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,1.0-3.0) = 0
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,5.15-11.94),a_len(_4,15.0-30.0) = 0
-> class mips_01_03_16_01 "RNA degradation"
Evaluation on training data (2913 items):
at_At1g11650 mips_01_03_16 "putative DNA binding protein"
mips_01_03_16_01
mips_20_25
mips_20_25_16_09
at_At1g22910 mips_01_03 "unknown protein (At1g22910)"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05
mips_04_05_01
mips_04_05_05
mips_04_07
mips_04_09
mips_05
mips_05_04
mips_05_04_01
mips_06_10
mips_08
mips_08_01
mips_11
mips_11_01
mips_11_01_05
mips_11_01_99
mips_14
mips_14_01
mips_14_01_01
mips_25
mips_25_05
mips_25_05_03
mips_25_05_04
mips_25_05_05
mips_25_05_07
mips_25_05_09
mips_25_05_10
mips_25_05_99
mips_30
mips_30_03
at_At1g23860 mips_01_03_16 "9G8-like splicing factor / SRZ-21"
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_33_03_99
at_At1g43190 mips_01_03_16 "hypothetical protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At1g47500 mips_01_03 "hypothetical protein"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_05
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g49600 mips_01_03 "DNA binding protein ACBF, putative"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40_03
mips_63_03
at_At1g50300 mips_01_03 "putative protein"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g55310 mips_01_03_16 "Serine/arginine-rich protein"
mips_01_03_16_01
mips_20_25_16_09
at_At1g66260 mips_01_03_16 "RNA and export factor binding protein, putative"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At1g72800 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_04_01
mips_04_01_04
mips_04_03
mips_04_03_03
mips_40_10_07
mips_63_03_03
at_At2g14550 mips_01_03_16 "putative spliceosome associated protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At2g14870 mips_01 "hypothetical protein"
mips_01_03
mips_01_03_16
mips_01_03_16_01
mips_04
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40
mips_40_03
mips_63
mips_63_03
at_At2g16260 mips_01_03 "putative glycine-rich RNA-binding protein"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_05_07
mips_05_99
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At2g16940 mips_01_03_16 "splicing factor like protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At2g29580 mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
at_At2g42890 mips_01_03_16 "MEI2-like protein (MEI2)"
mips_01_03_16_01
mips_01_03_99
mips_03_03_02
mips_04_07
mips_04_09
at_At2g43410 mips_01_03_16 "hypothetical protein"
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_04_07
mips_04_09
at_At2g44710 mips_01_03 "putative heterogeneous nuclear ribonucleoprotein"
mips_01_03_16
mips_01_03_16_01
mips_05_07
mips_05_99
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At2g46610 mips_01_03 "putative arginine/serine-rich splicing factor"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At2g47310 mips_01_03 "putative FCA-related protein"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g07240 mips_01_03 "putative RNA-binding protein"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g07250 mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04
mips_04_05_05
mips_04_07
mips_04_09
mips_05_04_01
mips_06
mips_06_10
mips_08_01
mips_11_01_05
mips_11_01_99
mips_14_01_01
mips_25_05
mips_25_05_03
mips_25_05_04
mips_25_05_05
mips_25_05_07
mips_25_05_09
mips_25_05_10
mips_25_05_99
mips_30
mips_30_03
at_At3g11400 mips_01_03 "putative eukaryotic translation initiation factor 3 subunit"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g14450 mips_01_03 "RNA-binding protein, putative"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g16380 mips_01_03_16 "putative poly(A) binding protein"
mips_01_03_16_01
mips_04
mips_04_05_05
mips_20_25_16_09
mips_40_10
at_At3g19130 mips_01_03_16 "nuclear acid binding protein, putative"
mips_01_03_16_01
mips_13_11
mips_20_25_16
mips_20_25_16_09
at_At3g20930 mips_01_03 "unknown protein"
mips_01_03_16
mips_01_03_16_01
mips_05_07
mips_05_99
mips_20_25
mips_20_25_16_09
mips_40_26
mips_40_26_03
at_At3g50670 mips_01_03_16 "U1 snRNP 70K protein"
mips_01_03_16_01
mips_01_03_99
mips_04_05_05_01
mips_04_07
mips_04_09
mips_05_04_01
mips_08_01
mips_11_01_05
at_At3g54230 mips_01_03 "unknown protein"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
at_At3g61860 mips_01_03 "ARGININE/SERINE-RICH SPLICING FACTOR RSP31"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_04_05_05_01
mips_05
mips_13_11
mips_13_11_11
mips_20
mips_20_25
mips_63_03_03
at_At4g00830 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_01_03_99
mips_04_07
mips_04_09
mips_05_04_01
mips_08_01
mips_11_01_05
at_At4g25500 mips_01_03_16 "splicing factor At-SRp40"
mips_01_03_16_01
mips_04_05_05_01
mips_20_25_16_09
at_At4g26650 mips_01_03_16 "hnRNP-like protein"
mips_01_03_16_01
mips_04_99
mips_20_25_16
mips_20_25_16_09
at_At4g27000 mips_01_03_16 "putative DNA binding protein"
mips_01_03_16_01
mips_20_25_16_09
at_At4g31580 - mips_04_05_05_01 "splicing factor 9G8-like SR protein / SRZ-22"
mips_04_05_05_01_10
mips_20_25_16
mips_63_03_03
at_At4g34110 mips_01_03_16 "poly(A)-binding protein"
mips_01_03_16_01
mips_04_05_05
mips_05_07
mips_05_99
mips_20_25_16_09
at_At5g07290 mips_01_03_16 "Mei2-like protein"
mips_01_03_16_01
mips_03_03_02
mips_20_25_16_09
at_At5g08700 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_20_25_16_09
at_At5g16260 mips_01_03 "putative protein"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_20_25
mips_20_25_16_09
at_At5g37720 mips_01 "putative protein"
mips_01_03
mips_01_03_16
mips_01_03_16_01
mips_04
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_04_05_05
mips_40
mips_40_03
mips_63
mips_63_03
at_At5g52040 mips_01_03_16 "arginine/serine-rich splicing factor RSP41 homolog"
mips_01_03_16_01
mips_04_05_05_01
mips_20_25_16
mips_20_25_16_09
at_At5g55550 mips_01_03_16 "RNA-binding protein-like"
mips_01_03_16_01
mips_04_99
mips_20_25
mips_20_25_16_09
Training Accuracy: 41/42 (97.62%)
Training Frequency class 'mips_01_03_16_01': 67/2913 (2.30%)
Evaluation on validation data (1468 items):
at_At1g02840 mips_01_03_16 "ribonucleoprotein SF-2 like protein"
mips_01_03_16_01
mips_20_25_16_09
at_At1g07350 - mips_03 "transformer-SR ribonucleoprotein, putative"
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_33
mips_33_03
mips_33_03_99
mips_40_04
mips_63_01
mips_63_03
mips_63_03_03
mips_63_06
mips_63_19
at_At1g09230 mips_01_03 "unknown protein"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g22760 mips_01_03 "putative polyA-binding protein, PAB3"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_04_07
mips_04_09
mips_05
mips_05_04_01
mips_06_10
mips_08_01
mips_11_01
mips_11_01_05
mips_11_01_99
at_At1g34140 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At1g47490 mips_01_03_16 "unknown protein"
mips_01_03_16_01
mips_05_07
mips_05_99
mips_14_10
mips_14_10_02
mips_20_25_16
mips_40_25
at_At1g49760 mips_01_03_16 "Putative Poly-A Binding Protein (F14J22.3)"
mips_01_03_16_01
mips_05_07
mips_05_99
mips_20_25_16
mips_20_25_16_09
at_At1g53650 mips_01 "RNA-binding protein, putative"
mips_01_03
mips_01_03_16
mips_01_03_16_01
mips_04
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40
mips_40_03
mips_63
mips_63_03
at_At1g71770 mips_01_03_16 "polyadenylate-binding protein 5"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At1g71800 mips_01_03_16 "cleavage stimulation factor, putative"
mips_01_03_16_01
mips_04_05_05
mips_13
mips_13_11
mips_20_25_16_09
at_At2g19380 mips_01_03 "putative RNA-binding protein"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_04_07
mips_04_09
mips_05_04
mips_05_04_01
mips_05_07
mips_05_99
mips_06_10
mips_08_01
mips_11_01_05
mips_11_01_99
mips_14_01
mips_14_01_01
at_At2g35410 mips_01_03 "putative chloroplast RNA binding protein precursor"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_05_07
mips_05_99
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40_03
mips_63_03
at_At2g36660 mips_01_03 "putative poly(A) binding protein"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_04_07
mips_04_09
mips_05_04
mips_05_04_01
mips_06_10
mips_08_01
mips_11_01_05
mips_11_01_99
mips_14_01
mips_14_01_01
mips_25_05_03
mips_25_05_04
at_At3g06970 mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_20_25_16_09
at_At3g13700 mips_01_03 "hypothetical protein"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40_03
mips_63_03
at_At4g13860 - mips_04_05_05 "RNA-binding protein like"
mips_04_05_05_05
mips_11_01
mips_13_11
mips_25_05_25
mips_40_10_99
mips_40_26
mips_40_26_03
at_At5g59950 - mips_04_03 "transcriptional coactivator - like protein"
mips_04_03_03
mips_04_05_01_01
at_At5g64200 - mips_04_05_05_05 "putative protein"
at_At5g65260 - mips_04_05_05 "poly(A)-binding protein II-like"
mips_04_05_05_05
mips_04_05_05_11
mips_04_05_99
mips_04_07
mips_08_01
mips_13_05
Validation Accuracy: 14/19 (73.68%)
Validation Frequency class 'mips_01_03_16_01': 24/1468 (1.63%)
Evaluation on propertest data (2441 items):
at_At1g01080 mips_01_03 "ribonucleoprotein, putative"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05
mips_20_25
mips_20_25_16_09
at_At1g20880 mips_01_03 "At1g20880/F9H16_14"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g21570 mips_01_03_16 "glycine-rich RNA-binding protein grp1a, putative"
mips_01_03_16_01
mips_20_25_16_09
at_At1g22330 mips_01_03 "hypothetical protein"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g33470 - mips_25_05_13 "unknown protein"
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_37_03_01_01_01
mips_43
mips_43_03
mips_43_03_11
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_03_03
at_At1g54080 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_20_25_16_09
at_At1g60000 - mips_25_05_13 "unknown protein"
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_37_03_01_01_01
mips_40_10
mips_43
mips_43_03
mips_43_03_11
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_03_03
at_At1g60650 - mips_04_05_01 "putative RNA-binding protein"
mips_04_05_01_04
mips_04_05_01_04_03
mips_33_03_99
mips_63_01
mips_63_03
mips_63_03_03
at_At1g67770 mips_01_03 "terminal ear1-like protein"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g74230 - mips_25_05_13 "putative RNA-binding protein"
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_37_03_01_01_01
mips_43
mips_43_03
mips_43_03_11
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_03_03
at_At2g05160 mips_01_03 "hypothetical protein"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05
mips_05_07
mips_05_99
at_At2g18510 - mips_04_05 "putative spliceosome associated protein"
mips_04_05_01
mips_04_05_01_04
mips_04_05_05
mips_14
mips_20
mips_14_10
mips_14_10_02
mips_20_25
mips_20_25_16
mips_40_03
mips_40_25
mips_63_03
at_At2g21690 mips_01_03_16 "putative glycine-rich RNA binding protein"
mips_01_03_16_01
mips_20_25_16_09
mips_40_25
at_At2g22090 mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_20_25_16_09
at_At2g23350 mips_01_03_16 "putative poly(A) binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04_07
mips_04_09
mips_05_04_01
at_At2g33410 mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04_07
mips_04_09
mips_05_04_01
at_At2g37340 - mips_04_05_05 "unknown protein"
mips_04_05_05_01
mips_25_05_25
mips_33
mips_33_03
mips_33_03_99
mips_63_03_03
at_At2g41060 mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_20_25_16_09
at_At2g42240 - mips_04_05_05 "putative RNA-binding protein"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_05
mips_06_10
mips_40_10_99
mips_63_03_03
at_At2g43370 mips_01_03 "putative U1 small nuclear ribonucleoprotein 70 kDa"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g15010 mips_01_03_16 "RNA-binding protein"
mips_01_03_16_01
mips_13_11
mips_20_25_16
mips_20_25_16_09
at_At3g26120 mips_01_03_16 "RNA-binding protein, putative"
mips_01_03_16_01
mips_20_25_16_09
at_At3g48830 - mips_04_03 "putative protein"
mips_04_03_06
mips_04_05_05
mips_04_05_05_05
at_At3g52380 mips_01 "RNA-binding protein cp33 precursor"
mips_01_03
mips_01_03_16
mips_01_03_16_01
mips_04
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40_03
mips_40_26
mips_40_26_03
mips_63
mips_63_03
at_At3g52660 mips_01_03_16 "putative RNA binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
at_At3g56860 mips_01_03_16 "unknown protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At4g02430 mips_01_03_16 ""
mips_01_03_16_01
mips_04_05_05_01
mips_20_25_16
mips_20_25_16_09
at_At5g02530 - mips_04_05_01_01 "putative protein"
mips_04_05_05
at_At5g04210 - mips_04_05_05 "RNA binding protein - like"
mips_04_05_05_05
at_At5g09880 - mips_04_05_05 "splicing factor-like protein"
mips_04_05_05_01
at_At5g19350 mips_01_03 "DNA binding protein ACBF - like"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At5g43960 - mips_10_01_05_05 "putative protein"
mips_10_01_05_05_01
at_At5g46250 - mips_04_03 "unknown protein"
mips_04_05_05
mips_04_05_05_99
mips_04_99
mips_63_03_03
at_At5g47320 - mips_25_05_13 "40S ribosomal protein S19"
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_37_03_01_01_01
mips_43
mips_43_03
mips_43_03_11
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_03_03
at_At5g55670 - mips_04_05 "unknown protein"
mips_04_05_05
mips_04_05_05_01
mips_11
mips_11_01
mips_13
mips_13_11
mips_25
mips_25_05
mips_25_05_25
mips_35
mips_35_03
mips_35_03_15
mips_40_10_99
mips_63_01
mips_63_03
at_At5g58790 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_20_25_16_09
at_At5g60170 - mips_04_05 "putative protein"
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_03
mips_14
mips_14_04
mips_14_04_03
mips_14_04_03_03
mips_25
mips_63_03
at_At5g60980 - mips_10_01_05_05 "ras-GTPase-activating protein SH3-domain binding protein - like"
mips_10_01_05_05_01
mips_62_02_01_01
mips_62_02_01_01_01
Propertest Accuracy: 21/38 (55.26%)
Propertest Frequency class 'mips_01_03_16_01': 56/2441 (2.29%)
New (unknown) data (1468 items):
at_At1g03460 - mips_05_07 "putative ribonucleoprotein"
mips_05_99
mips_63_03_03
at_At1g07360 - mips_04_05_05 "Unknown protein (At1g07360; F22G5.30)"
at_At1g09140 - mips_04 "putative SF2/ASF splicing modulator, Srp30"
mips_04_05
mips_04_05_05
mips_05
mips_05_07
mips_05_99
mips_40_03
mips_63
mips_63_03
at_At1g14340 - no entry null
at_At1g16610 - mips_25_05_10 "arginine/serine-rich protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At1g17640 - no entry null
at_At1g18630 - mips_04_09 "unknown protein"
mips_14_10
mips_14_10_02
mips_20_25_16
mips_40_25
at_At1g25300 - no entry null
at_At1g27050 - mips_67_50 "unknown protein"
mips_67_50_25
at_At1g29400 - mips_03_03 "putative RNA-binding protein MEI2 (At1g29400)"
mips_03_03_02
mips_04_05_05
mips_05
mips_05_07
mips_05_99
at_At1g51520 - mips_25_05_25 "unknown protein"
at_At1g53720 - mips_05 "hypothetical protein"
mips_06_01
mips_06_04
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_43
mips_43_03
mips_43_03_09
mips_62
mips_62_01
mips_62_01_01
mips_63_13
at_At1g58470 - mips_04_99 "putative protein"
at_At1g76460 - mips_04_05_05 "putative RNA-binding protein"
mips_04_09
mips_40_10_99
at_At1g78260 - mips_14_10 "unknown protein"
mips_14_10_02
mips_20_25_16
mips_40_25
at_At1g79880 - mips_25_05_10 "putative RNA-binding protein"
mips_25_05_13
mips_33_03_13
mips_35_03_17
at_At2g15710 - no entry null
at_At2g21440 - no entry null
at_At2g24590 - mips_04_05_05 "putative RSZp22 splicing factor"
mips_05_07
at_At2g33440 - no entry null
at_At2g37510 - mips_40_25 "putative RNA-binding protein"
at_At2g46780 - mips_04_05_05 "putative RNA-binding protein"
mips_04_09
mips_04_99
mips_40_10_99
at_At2g48010 - mips_33_03_13 "protein kinase like protein"
mips_35_03_17
at_At3g07810 - mips_01_03_99 "putative RNA-binding protein"
mips_03_03_02
mips_04_99
at_At3g12640 - mips_25_05_13 "hypothetical protein"
mips_25_05_25
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g13570 - mips_25_05_10 "serine/arginine-rich protein, putative"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
at_At3g14100 - mips_04_05_05 "oligouridylate binding protein, putative"
at_At3g20890 - mips_25_05_10 "unknown protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g21100 - no entry null
at_At3g23830 - mips_14_10 "glycine-rich RNA binding protein, putative"
mips_14_10_02
mips_20_25_16
mips_40_25
at_At3g23900 - no entry null
at_At3g26420 - no entry null
at_At3g27700 - mips_25_05_15 "unknown protein"
mips_35
mips_35_03
mips_35_03_12
mips_63_07
at_At3g46470 - no entry null
at_At3g47120 - mips_05 "putative RNA-binding protein"
mips_05_07
mips_05_99
mips_25_05_13
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g49430 - mips_04_05_05 "PRE-MRNA SPLICING FACTOR SF2-like protein"
mips_14_10_02
at_At3g53460 - mips_04_05_05 "RNA-binding protein cp29 protein"
mips_25_05_10
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g54770 - mips_04_05_05 "RNA binding protein - like"
mips_04_09
mips_40_10_99
at_At3g55340 - no entry null
at_At3g55460 - mips_14_10 "putative RNA binding protein"
mips_14_10_02
at_At3g59200 - no entry null
at_At3g63450 - mips_25_05_25 "putative protein"
at_At4g03110 - mips_04_05 "putative ribonucleoprotein"
mips_04_05_05
mips_05
mips_05_07
mips_05_99
mips_40_03
mips_63_03
mips_63_03_03
at_At4g12640 - no entry null
at_At4g13850 - mips_14_10 "glycine-rich RNA-binding protein AtGRP2 - like"
mips_14_10_02
mips_20_25
mips_20_25_16
mips_40_25
at_At4g14300 - mips_04_05_05 "ribonucleoprotein like protein"
mips_04_09
mips_25_05
mips_30
mips_30_10_03
mips_40_10_99
at_At4g16290 - mips_04_05_05 "FCA delta protein"
at_At4g17720 - no entry null
at_At4g24770 - no entry null
at_At4g36960 - mips_25_05_10 "unknown protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At5g01720 - no entry null
at_At5g04280 - mips_04_05_05 "RNA-binding protein-like"
mips_25_05_25
mips_35
mips_35_03
mips_35_03_15
mips_40_10_99
at_At5g06000 - mips_05_04_01 "eukaryotic translation initiation factor 3 subunit-like protein"
at_At5g06210 - mips_40_25 "unknown protein"
at_At5g12190 - no entry null
at_At5g28330 - mips_04_07 "putative protein"
mips_04_09
at_At5g44200 - mips_04_05_05 "nuclear cap-binding protein; CBP20 (gb|AAD29697.1)"
mips_05_04
mips_05_04_01
mips_63_03_03
at_At5g47620 - mips_04_99 "RNA-binding protein-like"
mips_05_07
mips_05_99
mips_25_05_25
at_At5g50250 - mips_04_05_05 "RNA-binding protein-like"
mips_05_07
mips_05_99
at_At5g51120 - mips_04_05_99 "putative polyA-binding protein II"
at_At5g54900 - no entry null
at_At5g56930 - mips_04_05_05 "unknown protein"
mips_40_10_99
mips_63_03_03
at_At5g58470 - mips_40_10_03 "RNA/ssDNA-binding protein - like"
at_At5g61030 - mips_04_01 "RNA-binding protein - like"
mips_04_01_04
mips_04_05_05
mips_14_10
mips_14_10_02
mips_40_10_99
at_At5g61960 - mips_03_03 "Mei2-like protein"
mips_03_03_02
mips_04_05_05
at_At5g66010 - mips_25_05_13 "putative protein"
mips_25_05_25
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_45
mips_45_03
mips_45_03_17
mips_47
mips_47_03
mips_47_03_01
mips_63_03_03
------------------
Rule 1572
ipr_RNA-binding_region_RNP-1___RNA_recognition_motif_(_orf_0,_ipr_1) = 1
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 1
ss(_1,_3,b,_2),c_len(_2,11.0-15.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),a_len(_4,11.0-15.0) = 0
seq_cw4_ratio <= 0.046
seq_if2_ratio <= 0.556
seq_yc8_ratio <= 0.043
ss(_1,_3,c,_2),c_len(_3,9.0-11.0),ss(_1,_2,a,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,5.15-11.94) = 0
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_4,a,_5),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3),alpha_dist(_1,45.54-101.0) = 0
seq_wf2_ratio <= 0.15
seq_ta5_ratio <= 1.055
seq_cc7_ratio <= 0.215
seq_ew10_ratio <= 0.599
seq_ks10_ratio <= 1.587
ss(_1,_3,c,_2),c_len(_3,11.0-15.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,1.0-3.0) = 0
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,5.15-11.94),a_len(_4,15.0-30.0) = 0
-> class mips_20_25_16_09 "blood coagulation"
Evaluation on training data (2913 items):
at_At1g11650 mips_01_03_16 "putative DNA binding protein"
mips_01_03_16_01
mips_20_25
mips_20_25_16_09
at_At1g23860 - mips_01_03_16 "9G8-like splicing factor / SRZ-21"
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_33_03_99
at_At1g43190 mips_01_03_16 "hypothetical protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At1g47500 mips_01_03 "hypothetical protein"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_05
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g49600 mips_01_03 "DNA binding protein ACBF, putative"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40_03
mips_63_03
at_At1g50300 mips_01_03 "putative protein"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g55310 mips_01_03_16 "Serine/arginine-rich protein"
mips_01_03_16_01
mips_20_25_16_09
at_At1g66260 mips_01_03_16 "RNA and export factor binding protein, putative"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At2g14550 mips_01_03_16 "putative spliceosome associated protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At2g14870 mips_01 "hypothetical protein"
mips_01_03
mips_01_03_16
mips_01_03_16_01
mips_04
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40
mips_40_03
mips_63
mips_63_03
at_At2g16260 mips_01_03 "putative glycine-rich RNA-binding protein"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_05_07
mips_05_99
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At2g16940 mips_01_03_16 "splicing factor like protein"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At2g42890 - mips_01_03_16 "MEI2-like protein (MEI2)"
mips_01_03_16_01
mips_01_03_99
mips_03_03_02
mips_04_07
mips_04_09
at_At2g44710 mips_01_03 "putative heterogeneous nuclear ribonucleoprotein"
mips_01_03_16
mips_01_03_16_01
mips_05_07
mips_05_99
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At2g46610 mips_01_03 "putative arginine/serine-rich splicing factor"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At2g47310 mips_01_03 "putative FCA-related protein"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g07240 mips_01_03 "putative RNA-binding protein"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g11400 mips_01_03 "putative eukaryotic translation initiation factor 3 subunit"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g14450 mips_01_03 "RNA-binding protein, putative"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g16380 mips_01_03_16 "putative poly(A) binding protein"
mips_01_03_16_01
mips_04
mips_04_05_05
mips_20_25_16_09
mips_40_10
at_At3g19130 mips_01_03_16 "nuclear acid binding protein, putative"
mips_01_03_16_01
mips_13_11
mips_20_25_16
mips_20_25_16_09
at_At3g20930 mips_01_03 "unknown protein"
mips_01_03_16
mips_01_03_16_01
mips_05_07
mips_05_99
mips_20_25
mips_20_25_16_09
mips_40_26
mips_40_26_03
at_At3g61860 - mips_01_03 "ARGININE/SERINE-RICH SPLICING FACTOR RSP31"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_04_05_05_01
mips_05
mips_13_11
mips_13_11_11
mips_20
mips_20_25
mips_63_03_03
at_At4g00830 - mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_01_03_99
mips_04_07
mips_04_09
mips_05_04_01
mips_08_01
mips_11_01_05
at_At4g25500 mips_01_03_16 "splicing factor At-SRp40"
mips_01_03_16_01
mips_04_05_05_01
mips_20_25_16_09
at_At4g26650 mips_01_03_16 "hnRNP-like protein"
mips_01_03_16_01
mips_04_99
mips_20_25_16
mips_20_25_16_09
at_At4g27000 mips_01_03_16 "putative DNA binding protein"
mips_01_03_16_01
mips_20_25_16_09
at_At4g31580 - mips_04_05_05_01 "splicing factor 9G8-like SR protein / SRZ-22"
mips_04_05_05_01_10
mips_20_25_16
mips_63_03_03
at_At4g34110 mips_01_03_16 "poly(A)-binding protein"
mips_01_03_16_01
mips_04_05_05
mips_05_07
mips_05_99
mips_20_25_16_09
at_At5g07290 mips_01_03_16 "Mei2-like protein"
mips_01_03_16_01
mips_03_03_02
mips_20_25_16_09
at_At5g08700 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_20_25_16_09
at_At5g16260 mips_01_03 "putative protein"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_20_25
mips_20_25_16_09
at_At5g52040 mips_01_03_16 "arginine/serine-rich splicing factor RSP41 homolog"
mips_01_03_16_01
mips_04_05_05_01
mips_20_25_16
mips_20_25_16_09
at_At5g55550 mips_01_03_16 "RNA-binding protein-like"
mips_01_03_16_01
mips_04_99
mips_20_25
mips_20_25_16_09
Training Accuracy: 29/34 (85.29%)
Training Frequency class 'mips_20_25_16_09': 32/2913 (1.10%)
Evaluation on validation data (1468 items):
at_At1g02840 mips_01_03_16 "ribonucleoprotein SF-2 like protein"
mips_01_03_16_01
mips_20_25_16_09
at_At1g22760 - mips_01_03 "putative polyA-binding protein, PAB3"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_04_07
mips_04_09
mips_05
mips_05_04_01
mips_06_10
mips_08_01
mips_11_01
mips_11_01_05
mips_11_01_99
at_At1g47490 - mips_01_03_16 "unknown protein"
mips_01_03_16_01
mips_05_07
mips_05_99
mips_14_10
mips_14_10_02
mips_20_25_16
mips_40_25
at_At1g49760 mips_01_03_16 "Putative Poly-A Binding Protein (F14J22.3)"
mips_01_03_16_01
mips_05_07
mips_05_99
mips_20_25_16
mips_20_25_16_09
at_At1g53650 mips_01 "RNA-binding protein, putative"
mips_01_03
mips_01_03_16
mips_01_03_16_01
mips_04
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40
mips_40_03
mips_63
mips_63_03
at_At1g71770 mips_01_03_16 "polyadenylate-binding protein 5"
mips_01_03_16_01
mips_20_25_16
mips_20_25_16_09
at_At1g71800 mips_01_03_16 "cleavage stimulation factor, putative"
mips_01_03_16_01
mips_04_05_05
mips_13
mips_13_11
mips_20_25_16_09
at_At2g35410 mips_01_03 "putative chloroplast RNA binding protein precursor"
mips_01_03_16
mips_01_03_16_01
mips_05
mips_05_04
mips_05_07
mips_05_99
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40_03
mips_63_03
at_At2g36660 - mips_01_03 "putative poly(A) binding protein"
mips_01_03_16
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
mips_04_07
mips_04_09
mips_05_04
mips_05_04_01
mips_06_10
mips_08_01
mips_11_01_05
mips_11_01_99
mips_14_01
mips_14_01_01
mips_25_05_03
mips_25_05_04
at_At3g06970 mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_20_25_16_09
at_At4g13860 - mips_04_05_05 "RNA-binding protein like"
mips_04_05_05_05
mips_11_01
mips_13_11
mips_25_05_25
mips_40_10_99
mips_40_26
mips_40_26_03
at_At5g59950 - mips_04_03 "transcriptional coactivator - like protein"
mips_04_03_03
mips_04_05_01_01
at_At5g64200 - mips_04_05_05_05 "putative protein"
at_At5g65260 - mips_04_05_05 "poly(A)-binding protein II-like"
mips_04_05_05_05
mips_04_05_05_11
mips_04_05_99
mips_04_07
mips_08_01
mips_13_05
Validation Accuracy: 7/14 (50.00%)
Validation Frequency class 'mips_20_25_16_09': 17/1468 (1.16%)
Evaluation on propertest data (2441 items):
at_At1g01080 mips_01_03 "ribonucleoprotein, putative"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05
mips_20_25
mips_20_25_16_09
at_At1g20880 mips_01_03 "At1g20880/F9H16_14"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g21570 mips_01_03_16 "glycine-rich RNA-binding protein grp1a, putative"
mips_01_03_16_01
mips_20_25_16_09
at_At1g22330 mips_01_03 "hypothetical protein"
mips_01_03_16
mips_01_03_16_01
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g33470 - mips_25_05_13 "unknown protein"
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_37_03_01_01_01
mips_43
mips_43_03
mips_43_03_11
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_03_03
at_At1g54080 mips_01_03_16 "putative protein"
mips_01_03_16_01
mips_20_25_16_09
at_At1g60000 - mips_25_05_13 "unknown protein"
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_37_03_01_01_01
mips_40_10
mips_43
mips_43_03
mips_43_03_11
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_03_03
at_At1g60650 - mips_04_05_01 "putative RNA-binding protein"
mips_04_05_01_04
mips_04_05_01_04_03
mips_33_03_99
mips_63_01
mips_63_03
mips_63_03_03
at_At1g67770 mips_01_03 "terminal ear1-like protein"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At1g74230 - mips_25_05_13 "putative RNA-binding protein"
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_37_03_01_01_01
mips_43
mips_43_03
mips_43_03_11
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_03_03
at_At2g18510 - mips_04_05 "putative spliceosome associated protein"
mips_04_05_01
mips_04_05_01_04
mips_04_05_05
mips_14
mips_20
mips_14_10
mips_14_10_02
mips_20_25
mips_20_25_16
mips_40_03
mips_40_25
mips_63_03
at_At2g21690 mips_01_03_16 "putative glycine-rich RNA binding protein"
mips_01_03_16_01
mips_20_25_16_09
mips_40_25
at_At2g23350 - mips_01_03_16 "putative poly(A) binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04_07
mips_04_09
mips_05_04_01
at_At2g33410 - mips_01_03_16 "putative RNA-binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04_07
mips_04_09
mips_05_04_01
at_At2g37340 - mips_04_05_05 "unknown protein"
mips_04_05_05_01
mips_25_05_25
mips_33
mips_33_03
mips_33_03_99
mips_63_03_03
at_At2g42240 - mips_04_05_05 "putative RNA-binding protein"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_05
mips_06_10
mips_40_10_99
mips_63_03_03
at_At2g43370 mips_01_03 "putative U1 small nuclear ribonucleoprotein 70 kDa"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At3g15010 mips_01_03_16 "RNA-binding protein"
mips_01_03_16_01
mips_13_11
mips_20_25_16
mips_20_25_16_09
at_At3g52380 mips_01 "RNA-binding protein cp33 precursor"
mips_01_03
mips_01_03_16
mips_01_03_16_01
mips_04
mips_05
mips_05_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_20_25_16_09
mips_40_03
mips_40_26
mips_40_26_03
mips_63
mips_63_03
at_At3g52660 - mips_01_03_16 "putative RNA binding protein"
mips_01_03_16_01
mips_01_03_99
mips_04_05_05
at_At4g02430 mips_01_03_16 ""
mips_01_03_16_01
mips_04_05_05_01
mips_20_25_16
mips_20_25_16_09
at_At5g02530 - mips_04_05_01_01 "putative protein"
mips_04_05_05
at_At5g04210 - mips_04_05_05 "RNA binding protein - like"
mips_04_05_05_05
at_At5g09880 - mips_04_05_05 "splicing factor-like protein"
mips_04_05_05_01
at_At5g19350 mips_01_03 "DNA binding protein ACBF - like"
mips_01_03_16
mips_01_03_16_01
mips_04_05_05
mips_05_04
mips_20_25
mips_20_25_16
mips_20_25_16_09
at_At5g43960 - mips_10_01_05_05 "putative protein"
mips_10_01_05_05_01
at_At5g46250 - mips_04_03 "unknown protein"
mips_04_05_05
mips_04_05_05_99
mips_04_99
mips_63_03_03
at_At5g60170 - mips_04_05 "putative protein"
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_03
mips_14
mips_14_04
mips_14_04_03
mips_14_04_03_03
mips_25
mips_63_03
at_At5g60980 - mips_10_01_05_05 "ras-GTPase-activating protein SH3-domain binding protein - like"
mips_10_01_05_05_01
mips_62_02_01_01
mips_62_02_01_01_01
Propertest Accuracy: 12/29 (41.38%)
Propertest Frequency class 'mips_20_25_16_09': 31/2441 (1.27%)
New (unknown) data (1468 items):
at_At1g03460 - mips_05_07 "putative ribonucleoprotein"
mips_05_99
mips_63_03_03
at_At1g09140 - mips_04 "putative SF2/ASF splicing modulator, Srp30"
mips_04_05
mips_04_05_05
mips_05
mips_05_07
mips_05_99
mips_40_03
mips_63
mips_63_03
at_At1g11050 - mips_10_05 "Ser/Thr protein kinase isolog"
at_At1g16610 - mips_25_05_10 "arginine/serine-rich protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At1g17640 - no entry null
at_At1g18630 - mips_04_09 "unknown protein"
mips_14_10
mips_14_10_02
mips_20_25_16
mips_40_25
at_At1g25300 - no entry null
at_At1g27050 - mips_67_50 "unknown protein"
mips_67_50_25
at_At1g29400 - mips_03_03 "putative RNA-binding protein MEI2 (At1g29400)"
mips_03_03_02
mips_04_05_05
mips_05
mips_05_07
mips_05_99
at_At1g51520 - mips_25_05_25 "unknown protein"
at_At1g53720 - mips_05 "hypothetical protein"
mips_06_01
mips_06_04
mips_11_01
mips_13_11
mips_20
mips_20_25
mips_20_25_16
mips_43
mips_43_03
mips_43_03_09
mips_62
mips_62_01
mips_62_01_01
mips_63_13
at_At1g58470 - mips_04_99 "putative protein"
at_At1g76460 - mips_04_05_05 "putative RNA-binding protein"
mips_04_09
mips_40_10_99
at_At1g78260 - mips_14_10 "unknown protein"
mips_14_10_02
mips_20_25_16
mips_40_25
at_At2g15710 - no entry null
at_At2g21440 - no entry null
at_At2g24590 - mips_04_05_05 "putative RSZp22 splicing factor"
mips_05_07
at_At2g33440 - no entry null
at_At2g37510 - mips_40_25 "putative RNA-binding protein"
at_At2g46780 - mips_04_05_05 "putative RNA-binding protein"
mips_04_09
mips_04_99
mips_40_10_99
at_At2g48010 - mips_33_03_13 "protein kinase like protein"
mips_35_03_17
at_At3g07810 - mips_01_03_99 "putative RNA-binding protein"
mips_03_03_02
mips_04_99
at_At3g12640 - mips_25_05_13 "hypothetical protein"
mips_25_05_25
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g13570 - mips_25_05_10 "serine/arginine-rich protein, putative"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
at_At3g20890 - mips_25_05_10 "unknown protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g23830 - mips_14_10 "glycine-rich RNA binding protein, putative"
mips_14_10_02
mips_20_25_16
mips_40_25
at_At3g23900 - no entry null
at_At3g26420 - no entry null
at_At3g46470 - no entry null
at_At3g47120 - mips_05 "putative RNA-binding protein"
mips_05_07
mips_05_99
mips_25_05_13
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g49430 - mips_04_05_05 "PRE-MRNA SPLICING FACTOR SF2-like protein"
mips_14_10_02
at_At3g49650 - mips_08_22 "kinesin-like protein"
mips_63_06
at_At3g53460 - mips_04_05_05 "RNA-binding protein cp29 protein"
mips_25_05_10
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g54770 - mips_04_05_05 "RNA binding protein - like"
mips_04_09
mips_40_10_99
at_At3g55340 - no entry null
at_At4g03110 - mips_04_05 "putative ribonucleoprotein"
mips_04_05_05
mips_05
mips_05_07
mips_05_99
mips_40_03
mips_63_03
mips_63_03_03
at_At4g13850 - mips_14_10 "glycine-rich RNA-binding protein AtGRP2 - like"
mips_14_10_02
mips_20_25
mips_20_25_16
mips_40_25
at_At4g14300 - mips_04_05_05 "ribonucleoprotein like protein"
mips_04_09
mips_25_05
mips_30
mips_30_10_03
mips_40_10_99
at_At4g16290 - mips_04_05_05 "FCA delta protein"
at_At4g24770 - no entry null
at_At4g36960 - mips_25_05_10 "unknown protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At5g04280 - mips_04_05_05 "RNA-binding protein-like"
mips_25_05_25
mips_35
mips_35_03
mips_35_03_15
mips_40_10_99
at_At5g06000 - mips_05_04_01 "eukaryotic translation initiation factor 3 subunit-like protein"
at_At5g06210 - mips_40_25 "unknown protein"
at_At5g12190 - no entry null
at_At5g28330 - mips_04_07 "putative protein"
mips_04_09
at_At5g47620 - mips_04_99 "RNA-binding protein-like"
mips_05_07
mips_05_99
mips_25_05_25
at_At5g50250 - mips_04_05_05 "RNA-binding protein-like"
mips_05_07
mips_05_99
at_At5g54900 - no entry null
at_At5g61030 - mips_04_01 "RNA-binding protein - like"
mips_04_01_04
mips_04_05_05
mips_14_10
mips_14_10_02
mips_40_10_99
at_At5g61960 - mips_03_03 "Mei2-like protein"
mips_03_03_02
mips_04_05_05
at_At5g66010 - mips_25_05_13 "putative protein"
mips_25_05_25
mips_33
mips_33_03
mips_33_03_11
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_45
mips_45_03
mips_45_03_17
mips_47
mips_47_03
mips_47_03_01
mips_63_03_03
------------------
Rule 260
scop_c.69 <= 5.3e-09
profscan(_orf_0,_profscan_id_1,_ipr_2) = 1
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),fprintscan(_orf_0,_fprintscan_id_3,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_4,_ipr_2) = 0
seq_cm1_ratio <= 0.106
seq_yn5_ratio <= 0.292
ss(_1,_3,b,_2),beta_dist(_1,29.93-101.0),c_len(_2,9.0-11.0) = 0
ss(_1,_3,c,_2),c_len(_3,11.0-15.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,15.0-30.0) = 0
ss(_1,_3,b,_2),c_len(_2,6.0-9.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),a_len(_4,3.0-6.0) = 0
-> class mips_01_05_01_03 "C-compound, carbohydrate anabolism"
Evaluation on training data (2913 items):
at_At1g64670 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At1g77420 mips_01_05_01_01_09 "putative lipase"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At2g23550 mips_01_05_01_01_09 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At2g23560 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At2g23580 mips_01_05_01_01 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20_99
mips_06_13
mips_11_05
mips_11_05_03
mips_40_19
at_At2g23610 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At2g36290 mips_01_02 "unknown protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_01
mips_11_07
mips_40_19
at_At3g24420 mips_01_02 "unknown protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_11_05
mips_11_07_01
at_At3g29770 mips_01_02 "alpha/beta hydrolase, putative"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_11_05
mips_11_05_03
mips_40_19
at_At3g44520 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_40_19
at_At3g51000 mips_01_05_01_01_09 "epoxide hydrolase-like protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g52570 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g55190 mips_01_02 "lipase -like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At4g10030 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At4g10050 mips_01_05_01_01 "lipase like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_02_11_05
mips_06_07_99
mips_62_01_01
mips_62_02
mips_62_02_01
mips_62_02_01_02
at_At4g15960 mips_01_05_01_01_09 "putative epoxide hydrolase"
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_40_19
at_At4g24140 mips_01_05 "putative protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_04
mips_01_25
mips_01_25_07
mips_47_03_11
mips_47_03_11_03
mips_63_09
at_At4g36610 mips_01_02 "unknown protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_07
mips_06_13
mips_11_01
at_At4g37140 mips_01_02 "putative protein (partial)"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At4g37150 mips_01_02 "hydroxynitrile lyase like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At5g02970 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_11_07
mips_40_19
at_At5g09430 mips_01_02 "putative hydrolase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_02_11_05
mips_11_07_01
at_At5g10300 mips_01_02 "alpha-hydroxynitrile lyase-like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At5g13800 mips_01_05_01_01_09 "putative protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At5g19850 mips_01_05 "putative protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_03
mips_03_03_01
mips_03_03_01_02
mips_06
mips_06_07_03
mips_13
mips_13_11
mips_14_04
mips_40_10
mips_40_19
at_At5g38520 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_02_11_05
mips_11_07_01
at_At5g41900 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_11_07
mips_40_19
Training Accuracy: 27/27 (100.00%)
Training Frequency class 'mips_01_05_01_03': 228/2913 (7.83%)
Evaluation on validation data (1468 items):
at_At1g13820 mips_01_02 "hypothetical protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_02_11
mips_02_11_05
mips_11_07
mips_11_07_01
mips_40_19
at_At1g72620 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_03_03_01_02
mips_06_07_03
mips_08_01
mips_10_01_05
mips_10_01_05_01
mips_11_01_01
mips_11_01_99
at_At1g74300 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At2g45600 - mips_01_05_01 "unknown protein"
mips_01_05_01_01
mips_11_07
mips_11_07_09
mips_11_10
mips_11_10_09
mips_13_03
mips_13_03_01
mips_13_03_05
mips_40_07
mips_40_27
mips_40_27_99
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_05
at_At3g09690 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g10840 mips_01_02 "putative alpha/beta hydrolase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_04
mips_01_25
mips_01_25_07
mips_11_07
mips_40_19
mips_40_27
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_03
mips_63_09
at_At3g50440 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At3g54240 mips_01_02 "putative protein (fragment)"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At4g09900 mips_01_02 "putative host response protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At4g12830 mips_01_05 "hydrolase like protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_40_19
at_At4g37470 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
at_At5g14390 - mips_14_04_03_01 "putative protein"
at_At5g14980 mips_01_02 "lysophospholipase -like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At5g16120 mips_01_05_01_01_09 "lipase-like protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At5g17780 mips_01_02 "putative protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_11_07
mips_40_19
at_At5g38220 - mips_14_04_03 "putative protein"
mips_14_04_03_01
at_At5g38360 mips_01_02 "similar to unknown protein (pir||T03994)"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
at_At5g39220 mips_01_02 "putative protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_06_07
mips_06_13
mips_11
mips_11_07
mips_40_19
at_At5g58310 mips_01_02 "polyneuridine aldehyde esterase-like; also similar to alpha-hydroxynitrile lyase"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20
mips_01_20_99
mips_11_05
mips_11_05_03
mips_40_19
Validation Accuracy: 16/19 (84.21%)
Validation Frequency class 'mips_01_05_01_03': 106/1468 (7.22%)
Evaluation on propertest data (2441 items):
at_At1g17430 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_03_03_01_02
mips_06_07_03
mips_08_01
mips_40_19
at_At1g52750 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
at_At1g74280 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At1g78210 mips_01_02 "unknown protein (At1g78210)"
mips_01_05
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_02_11_05
mips_06_13
mips_11_07_01
mips_40_19
at_At2g23590 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_11_05_03
mips_11_07
mips_40_19
at_At2g23600 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20
mips_01_20_99
mips_06_07
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_40_19
at_At2g23620 mips_01_05_01_01_09 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g10870 mips_01_05 "putative alpha-hydroxynitrile lyase"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_10_01_01
mips_11_05
mips_11_05_03
mips_40_19
at_At3g30380 - mips_14_04_03 "unknown protein"
mips_14_04_03_01
at_At4g16690 mips_01 "cyanohydrin lyase like protein"
mips_01_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20
mips_01_20_99
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_40_19
at_At4g24160 mips_01_02 "putative protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_40_19
at_At4g24760 - mips_14_04_03 "unknown protein"
mips_14_04_03_01
at_At4g36530 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_02_11
mips_02_11_05
mips_11_07
mips_11_07_01
mips_40_19
at_At5g17720 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_11_07
mips_40_19
Propertest Accuracy: 12/14 (85.71%)
Propertest Frequency class 'mips_01_05_01_03': 167/2441 (6.84%)
New (unknown) data (1468 items):
at_At1g05800 - no entry null
at_At1g06800 - no entry null
at_At1g08310 - no entry null
at_At1g10040 - mips_01_06_04 "unknown protein"
at_At1g11090 - mips_01_06_04 "lysophospholipase isolog"
mips_02_25
at_At1g18360 - mips_01_06_04 "lysophospholipase homolog, putative (At1g18360)"
mips_02_25
at_At1g26120 - mips_01 "unknown protein (At1g26120)"
mips_01_06
mips_01_25
mips_01_25_07
mips_10
mips_13
mips_13_03
mips_13_03_01
mips_13_03_05
mips_13_07
mips_20
mips_40_27
mips_40_27_99
mips_63
mips_63_01
mips_98
at_At1g34340 - no entry null
at_At1g49650 - mips_01_06 "unknown protein"
mips_01_06_04
at_At1g52700 - no entry null
at_At1g54570 - no entry null
at_At1g54990 - no entry null
at_At1g73480 - mips_01_06_04 "putative lysophospholipase (At1g73480)"
mips_02_25
at_At1g74290 - mips_02_11 "unknown protein"
mips_02_11_05
mips_11_07
mips_11_07_01
at_At2g03550 - mips_01_06_04 "putative esterase"
mips_11_10
mips_11_10_09
at_At2g18100 - no entry null
at_At2g30550 - no entry null
at_At2g31690 - no entry null
at_At2g39410 - mips_01_06_04 "putative phospholipase"
mips_02_25
at_At2g39420 - mips_01_06_04 "phospholipase like protein"
mips_02_25
at_At2g45610 - mips_01_06_04 "unknown protein"
mips_11_10
mips_11_10_09
at_At2g47630 - mips_01 "putative phospholipase"
mips_02
mips_01_06
mips_01_06_04
mips_02_25
mips_11
mips_11_01
mips_13
mips_13_11
at_At3g26820 - no entry null
at_At3g26840 - no entry null
at_At3g50790 - no entry null
at_At4g22300 - mips_01_06_07 "putative protein"
mips_01_06_10
mips_48
at_At4g25770 - mips_01_06_04 "putative protein"
at_At4g31020 - mips_01_06 "putative protein"
mips_01_06_04
mips_11_01
mips_13_11
at_At5g11650 - mips_02 "lysophospholipase - like protein"
mips_01_05_01
mips_01_06
mips_01_06_04
mips_02_25
mips_11_01
mips_13_11
at_At5g15860 - mips_01_25 "Carboxylesterase-like protein"
mips_01_25_07
mips_13_07
mips_13_11
at_At5g19050 - no entry null
at_At5g19290 - mips_01_06_04 "phospholipase - like protein"
mips_02_25
at_At5g19630 - no entry null
at_At5g49950 - no entry null
at_At5g51180 - mips_01_06_04 "unknown protein"
at_At5g53050 - no entry null
------------------
Rule 251
eval(_1,_2,0.0-9.0e-25),keyword(_2,glycoprotein),db_ref(_2,hssp) = 0
scop_c.1.8 <= 0.016
seq_gravy > -0.415
-> class mips_01_05_01_03 "C-compound, carbohydrate anabolism"
Evaluation on training data (2913 items):
at_At1g01570 mips_01_05_01_03 "hypothetical protein"
mips_01_05_01_03_02
mips_06
mips_30_27
mips_30_27_01
mips_40_08
at_At1g05280 mips_01_05 "hypothetical protein"
mips_01_05_01_03
mips_01_05_01_03_02
mips_06
mips_30_27
mips_30_27_01
at_At1g07850 mips_01_05_01_03_02 "hypothetical protein"
mips_40_08
at_At3g19620 mips_01_05_01_03 "beta-xylosidase, putative"
mips_01_05_01_03_02
mips_30_01
mips_40_01
at_At3g47010 mips_01_05_01_01 "beta-D-glucan exohydrolase - like protein"
mips_01_05_01_03
mips_01_05_01_03_02
at_At3g62710 mips_01_05_01_03_02 "beta-D-glucan exohydrolase-like protein"
mips_40_01
at_At5g08380 mips_01_05_01_01_02 "alpha-galactosidase - like protein"
mips_01_05_01_03_02
mips_06_13_04
mips_06_13_04_01
mips_40_25
at_At5g10560 mips_01_05 "beta-xylosidase - like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_30
mips_30_01
mips_40_01
at_At5g13690 - mips_01_05_01_01_04 "alpha-N-acetylglucosaminidase"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_40_25
at_At5g20250 mips_01_05_01_03 "seed imbitition protein-like"
at_At5g41460 mips_01_05_01_03 "putative protein"
mips_01_05_01_03_02
mips_06_07_02
mips_06_07_02_02
mips_30_27
mips_30_27_01
Training Accuracy: 10/11 (90.91%)
Training Frequency class 'mips_01_05_01_03': 228/2913 (7.83%)
Evaluation on validation data (1468 items):
at_At1g02640 mips_01_05_01_03 "beta-xylosidase, putative"
mips_01_05_01_03_02
mips_30_01
mips_40_01
at_At2g22960 - mips_47 "pseudogene"
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_67_04
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_25
at_At3g47000 mips_01 "beta-D-glucan exohydrolase - like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_30
mips_30_01
mips_40_01
at_At3g47050 mips_01_05_01_03_02 "beta-D-glucan exohydrolase - like protein"
mips_40_01
at_At3g54440 - mips_01_05_01_01_01 "beta Galactosidase - like protein"
mips_25_05_10
mips_25_05_13
mips_25_05_17
mips_33_03_13
mips_35_03_17
mips_37
mips_37_03
mips_37_03_17
mips_40_25
at_At4g01970 mips_01_05_01_03 "putative raffinose synthase or seed imbibition protein"
at_At4g15210 - mips_02 "beta-amylase"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_02_19
mips_02_99
at_At5g08370 mips_01_05_01_01_02 "alpha-galactosidase - like protein"
mips_01_05_01_03_02
mips_06_13_04
mips_06_13_04_01
mips_40_25
at_At5g18670 - mips_01 "beta-amylase-like proten"
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_02_19
mips_02_99
at_At5g20940 mips_01_05_01_03 "beta-glucosidase - like protein"
mips_01_05_01_03_02
mips_30_01
mips_40_01
at_At5g20950 mips_01_05_01_01 "beta-D-glucan exohydrolase-like protein"
mips_01_05_01_03
mips_01_05_01_03_02
Validation Accuracy: 7/11 (63.64%)
Validation Frequency class 'mips_01_05_01_03': 106/1468 (7.22%)
Evaluation on propertest data (2441 items):
at_At1g55740 mips_01_05_01_03 "seed imbibition protein, putative"
at_At3g26380 mips_01_05 "unknown protein"
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_05_01_03
mips_01_05_01_03_02
mips_06_13
mips_06_13_04
mips_06_13_04_01
mips_30
mips_40_25
at_At3g47040 mips_01_05_01 "beta-D-glucan exohydrolase - like protein"
mips_01_05_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_30_01
mips_40_01
at_At3g56310 mips_01_05 "alpha-galactosidase-like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_05_01_03
mips_01_05_01_03_02
mips_06_13
mips_06_13_04
mips_06_13_04_01
mips_30
mips_30_01
mips_40_25
at_At3g57520 mips_01 "imbibition protein homolog"
mips_01_05
mips_01_05_01
mips_01_05_01_03
mips_98
at_At4g11350 mips_01_05_01 "putative protein"
mips_01_05_01_03
mips_01_05_01_03_02
mips_05
mips_06_07
mips_06_07_02
mips_06_07_02_02
mips_30_27
mips_30_27_01
mips_40_02
at_At5g09730 - mips_01_05 "beta-xylosidase - like protein"
mips_01_05_01_01
mips_40_01
at_At5g49360 mips_01_05_01_03 "xylosidase"
mips_01_05_01_03_02
mips_40_01
Propertest Accuracy: 7/8 (87.50%)
Propertest Frequency class 'mips_01_05_01_03': 167/2441 (6.84%)
New (unknown) data (1468 items):
at_At1g06350 - mips_01_06_01 "hypothetical protein"
mips_40_07
mips_63_17
mips_63_17_09
at_At1g11820 - no entry null
at_At1g14590 - no entry null
at_At1g28690 - mips_02_30 "hypothetical protein"
mips_08_99
at_At1g28710 - no entry null
at_At1g65490 - no entry null
at_At1g65590 - no entry null
at_At1g78090 - mips_01_05_04 "trehalose-6-phosphate phosphatase (AtTPPB)"
mips_02_19
at_At2g14690 - mips_40_01 "1,4-beta-xylan endohydrolase"
at_At2g40840 - no entry null
at_At3g23920 - mips_02_19 "beta-amylase, putative"
mips_02_99
at_At4g00300 - mips_10 ""
at_At4g00490 - mips_02_19 "putative beta-amylase"
mips_02_99
at_At4g08160 - mips_40_01 "putative xylan endohydrolase"
at_At4g15240 - no entry null
at_At4g19970 - no entry null
at_At4g23490 - no entry null
at_At4g33850 - mips_40_01 "putative protein"
at_At4g33860 - mips_40_01 "putative protein"
at_At4g38300 - mips_40_01 "putative protein"
at_At4g38650 - mips_40_01 "putative protein"
at_At5g09700 - mips_40_01 "beta-glucosidase - like protein"
at_At5g40900 - no entry null
at_At5g55700 - mips_02_19 "beta-amylase"
mips_02_99
at_At5g64570 - mips_40_01 "beta-xylosidase"
at_At5g64860 - no entry null
------------------
Rule 257
eval(_1,_2,8.0e-10-2.0e-5),classification(_2,staphylococcus),db_ref(_2,interpro) = 0
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
eval(_1,_2,0.0-9.0e-25),keyword(_2,repeat),db_ref(_2,hssp) = 1
ss(_1,_3,c,_2),c_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,0.0-13.03) = 0
scop_c.1.8 <= 0.016
-> class mips_01_20_01_07 "biosynthesis of glycosides"
Evaluation on training data (2913 items):
at_At1g26560 mips_01_05_01_01_02 "beta-glucosidase like protein"
mips_01_20_01
mips_01_20_01_07
at_At1g51470 mips_01_05 "myrosinase precursor, putative"
mips_01_05_01
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At1g52400 mips_01_05_01 "beta-glucosidase, putative"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At1g60090 mips_01_20_01 "hypothetical protein"
mips_01_20_01_07
at_At1g61810 mips_01_05_01_01_02 "hypothetical protein"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At1g61820 mips_01_05_01 "hypothetical protein"
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At1g75940 mips_01_05_01_01_02 "ATA27"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At2g20680 - mips_01_05_01_01_01 "(1-4)-beta-mannan endohydrolase"
mips_40_25
at_At2g32810 mips_01_05_01_01_01 "putative beta-galactosidase (BGAL9)"
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
at_At2g32860 mips_01_05 "putative beta-glucosidase"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At2g44450 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
at_At2g44460 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
at_At2g44480 mips_01_20_01 "putative beta-glucosidase"
mips_01_20_01_07
mips_11_05_03
at_At2g44490 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
at_At3g09260 mips_01_05_01_01_02 "thioglucosidase 3D precursor"
mips_01_20_01
mips_01_20_01_07
at_At3g18080 mips_01 "beta-glucosidase like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At3g21370 mips_01_20_01 "beta-glucosidase, putative"
mips_01_20_01_07
mips_11_05_03
at_At3g60130 mips_01_05_01_01_01 "beta-glucosidase-like protein"
mips_01_20_01
mips_01_20_01_07
mips_02_01
at_At3g60140 mips_01_05_01 "beta-glucosidase"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At5g24550 mips_01_05_01_01_02 "beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At5g26000 mips_01_20_01 "myrosinase precursor"
mips_01_20_01_07
mips_11_05_03
at_At5g44640 mips_01_05_01_01_02 "beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At5g54570 mips_01_20_01 "beta-glucosidase"
mips_01_20_01_07
at_At5g63800 mips_01_05_01 "beta-galactosidase like protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
at_At5g63810 mips_01_05_01_01_01 "beta-galactosidase (emb|CAB64746.1)"
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
Training Accuracy: 24/25 (96.00%)
Training Frequency class 'mips_01_20_01_07': 37/2913 (1.27%)
Evaluation on validation data (1468 items):
at_At1g47600 mips_01_05_01_01_02 "hypothetical protein"
mips_01_20_01
mips_01_20_01_07
at_At1g60260 mips_01_05_01 "putative beta-glucosidase"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
mips_40_02
at_At1g60270 mips_01_20_01 ""
mips_01_20_01_07
at_At2g25630 mips_01_05_01 "putative beta-glucosidase"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
at_At4g15210 - mips_02 "beta-amylase"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_02_19
mips_02_99
at_At4g22100 mips_01_20_01 "glucosidase like protein"
mips_01_20_01_07
at_At4g27820 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At5g01930 - mips_01 "(1-4)-beta-mannan endohydrolase-like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
at_At5g18670 - mips_01 "beta-amylase-like proten"
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_02_19
mips_02_99
at_At5g25980 mips_01_20_01 "myrosinase TGG2"
mips_01_20_01_07
at_At5g36890 - mips_01_05_01_01_01 "beta-glucosidase -like protein"
mips_01_05_01_01_02
mips_02_01
Validation Accuracy: 7/11 (63.64%)
Validation Frequency class 'mips_01_20_01_07': 14/1468 (0.95%)
Evaluation on propertest data (2441 items):
at_At1g02310 - mips_01_05_01_01 "(1-4)-beta-mannan endohydrolase precursor, putative"
at_At1g02850 mips_01_20_01 "Similar to beta-glucosidases (At1g02850)"
mips_01_20_01_07
at_At1g51490 mips_01_05_01_01 "cyanogenic beta-glucosidase, putative"
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At1g66270 mips_01_20_01 "beta-glucosidase"
mips_01_20_01_07
at_At1g66280 mips_01_05_01 "beta-glucosidase, putative"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At2g44470 - mips_01_05_01_01_02 "putative beta-glucosidase"
at_At2g45880 - mips_02 "putative beta-amylase"
mips_01_05_01
mips_01_05_01_01
mips_02_19
mips_02_99
at_At3g18070 mips_01_05_01_01_02 "beta-glucosidase, putative"
mips_01_20_01
mips_01_20_01_07
at_At3g20440 - mips_01 "1,4-alpha-glucan branching enzyme, putative"
mips_01_01_07
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_02_19
mips_14
mips_14_04
mips_25
mips_25_05
mips_40_03
mips_67
mips_67_10
at_At3g52840 mips_01 "beta-galactosidase precursor - like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_30
mips_30_01
mips_40
mips_40_01
mips_40_25
at_At3g60120 mips_01_05_01_01_02 "beta-glucosidase-like protein"
mips_01_20_01
mips_01_20_01_07
at_At3g62750 - mips_01_05 "beta-glucosidase-like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_01_02
mips_40_02
at_At4g17090 - mips_02 "beta-amylase (ct-bmy gene)"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_02_19
mips_02_99
at_At4g21760 - mips_01_05 "beta-glucosidase -like protein"
mips_01_05_01
mips_01_05_01_01
mips_11
mips_11_05
mips_11_05_03
at_At5g04360 - mips_01_05_01_01_01 "pullulanase-like protein (starch debranching enzyme)"
mips_02_19
at_At5g24540 mips_01_05 "beta-glucosidase"
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At5g28510 mips_01_05 "thioglucosidase (myrosinase) - like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At5g42260 mips_01_05_01_01_02 "beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
Propertest Accuracy: 10/18 (55.56%)
Propertest Frequency class 'mips_01_20_01_07': 16/2441 (0.66%)
New (unknown) data (1468 items):
at_At1g72990 - mips_40_01 "unknown protein (At1g72990)"
mips_40_25
at_At1g78090 - mips_01_05_04 "trehalose-6-phosphate phosphatase (AtTPPB)"
mips_02_19
at_At2g32290 - mips_02_19 "putative beta-amylase"
mips_02_99
at_At3g10890 - no entry null
at_At3g10900 - no entry null
at_At3g23920 - mips_02_19 "beta-amylase, putative"
mips_02_99
at_At3g24330 - mips_01_04_01 "beta-1,3-glucanase, putative"
at_At3g26140 - no entry null
at_At3g30540 - no entry null
at_At4g00490 - mips_02_19 "putative beta-amylase"
mips_02_99
at_At4g28320 - no entry null
at_At5g16580 - no entry null
at_At5g24090 - mips_03_03_03 "acidic endochitinase (dbj|BAA21861.1)"
mips_40_27
at_At5g55700 - mips_02_19 "beta-amylase"
mips_02_99
at_At5g66460 - no entry null
------------------
Rule 642
eval(_1,_2,2.0e-5-4.0e-3),keyword(_2,rna_binding),db_ref(_2,prints) = 1
eval(_1,_2,2.0e-5-4.0e-3),sq_len(_2,667.0-1005.0),species(_2,gallus_gallus__chicken_) = 0
eval(_1,_2,9.0e-25-8.0e-10),classification(_2,viridiplantae),db_ref(_2,smart) = 0
eval(_1,_2,9.0e-25-8.0e-10),classification(_2,rhizobiaceae),db_ref(_2,interpro) = 1
eval(_1,_2,0.0-9.0e-25),db_ref(_2,prosite),desc(_2,chromosome) = 0
eval(_1,_2,0.0-9.0e-25),keyword(_2,transferase),db_ref(_2,genew) = 1
-> class mips_01_20_17_03 "biosynthesis of amines"
Evaluation on training data (2913 items):
at_At1g21130 mips_01_20_17 "O-methyltransferase, putative"
mips_01_20_17_03
mips_01_20_50
at_At1g23820 mips_01_01_01_03 "putative spermidine synthase"
mips_01_01_01_03_02
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_20_17_03
mips_01_20_50
at_At1g62900 mips_01_20_17_03 "O-methyltransferase 1, putative"
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
at_At1g62960 - mips_01_01_01 "1-aminocyclopropane-1-carboxylate synthase, putative"
mips_01_01_10_03
mips_01_02_01
mips_01_20_23
mips_01_20_99
mips_14_20
mips_20_20
mips_20_20_18
at_At1g77530 mips_01_20_17 "putative caffeic acid 3-O-methyltransferase"
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
at_At2g31740 mips_01_01_01_03 "unknown protein"
mips_01_07_01
mips_01_20_17_03
at_At3g53140 mips_01_20_05 "caffeic acid O-methyltransferase - like protein"
mips_01_20_05_11
mips_01_20_17
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05_04
mips_11_05_05
mips_11_05_05_01
at_At4g26220 mips_01_07 "caffeoyl-CoA O-methyltransferase like protein"
mips_01_07_01
mips_01_20
mips_01_20_17
mips_01_20_17_03
mips_01_20_50
mips_13_03
mips_13_03_01
mips_30_01
mips_40_16
at_At4g34050 mips_01_07_01 "caffeoyl-CoA O-methyltransferase - like protein"
mips_01_20_05
mips_01_20_05_11
mips_01_20_17_03
mips_01_20_50
mips_11_05_05
mips_11_05_05_01
mips_13_03
mips_13_03_01
at_At4g35160 mips_01_20_17 "O-methyltransferase - like protein"
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05_04
at_At5g04610 mips_01_01_01_03 "putative protein"
mips_01_01_01_03_02
mips_01_20_17_03
at_At5g37170 mips_01_20_17 "caffeic acid O-methyltransferase-like protein"
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05_04
at_At5g53120 mips_01_01_01_03 "spermidine synthase"
mips_01_01_01_03_02
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_20_17_03
mips_01_20_50
at_At5g54160 mips_01_20 "O-methyltransferase"
mips_01_20_17
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05
mips_05_04
mips_20
Training Accuracy: 13/14 (92.86%)
Training Frequency class 'mips_01_20_17_03': 45/2913 (1.54%)
Evaluation on validation data (1468 items):
at_At1g21100 mips_01_20 "O-methyltransferase, putative"
mips_01_20_17
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05
mips_05_04
mips_20
at_At1g21110 mips_01_20_17 "O-methyltransferase, putative"
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05_04
at_At1g63140 mips_01_20_17_03 "caffeic O-methyltransferase, putative"
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
at_At1g67990 mips_01_07_01 "putative S-adenosyl-L-methionine:trans-caffeoyl-Coenzyme A 3-O-methyltransferase"
mips_01_20_17_03
mips_01_20_50
mips_13_03
mips_13_03_01
at_At1g70310 mips_01_01 "unknown protein (At1g70310)"
mips_01_01_01
mips_01_01_01_03
mips_01_01_01_03_02
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_20_17
mips_01_20_17_03
mips_01_20_50
mips_25_03
mips_30_01
at_At1g77520 mips_01_20_17_03 "putative caffeic acid 3-O-methyltransferase"
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
Validation Accuracy: 6/6 (100.00%)
Validation Frequency class 'mips_01_20_17_03': 15/1468 (1.02%)
Evaluation on propertest data (2441 items):
at_At1g21120 mips_01 "O-methyltransferase, putative"
mips_01_20
mips_01_20_17
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05
mips_05_04
mips_20
mips_98
at_At1g33030 mips_01_20_17 "putative protein"
mips_01_20_17_03
mips_01_20_35_01
mips_01_20_50
at_At1g51990 mips_01_20_17_03 ""
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
at_At1g67980 mips_01_07_01 "S-adenosyl-L-methionine:trans-caffeoyl-Coenzyme A 3-O-methyltransferase"
mips_01_20_05
mips_01_20_05_11
mips_01_20_17_03
mips_01_20_50
mips_11_05_05
mips_11_05_05_01
mips_13_03
mips_13_03_01
at_At1g76790 mips_01_20 "catechol O-methyltransferase like protein"
mips_01_20_17
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_05
mips_05_04
mips_20
at_At2g47420 - mips_03_01_05 "putative dimethyladenosine transferase"
mips_03_01_05_01
mips_04_01
mips_04_01_04
mips_04_05_05
mips_04_05_05_99
at_At3g56330 - mips_04_03 "N2,N2-dimethylguanosine tRNA methyltransferases-like protein"
mips_04_03_03
mips_04_03_06
mips_04_05_05_99
at_At3g61990 mips_01_07_01 "unknown protein"
mips_01_20_17_03
mips_01_20_50
mips_13_03
mips_13_03_01
at_At3g62000 mips_01_07_01 "putative protein"
mips_01_20_17_03
mips_01_20_50
mips_13_03
mips_13_03_01
at_At4g35150 mips_01_20_17_03 "O-methyltransferase - like protein"
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
at_At5g01230 - mips_03 "cell division - like protein"
mips_03_03
mips_03_03_01
mips_03_03_01_03
mips_03_99
mips_04
mips_04_01
mips_04_01_04
mips_05_99
mips_40_10
mips_40_10_07
mips_98
at_At5g19530 mips_01_01_01_03 "spermine synthase (ACL5)"
mips_01_01_01_03_02
mips_01_01_01_07
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_20_17
mips_01_20_17_03
mips_01_20_50
at_At5g53810 mips_01 "caffeic acid 3-O-methyltransferase-like protein"
mips_01_20_17
mips_01_20_17_03
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
mips_40
mips_98
Propertest Accuracy: 10/13 (76.92%)
Propertest Frequency class 'mips_01_20_17_03': 40/2441 (1.64%)
New (unknown) data (1468 items):
at_At1g22800 - no entry null
at_At1g31850 - no entry null
at_At1g73320 - no entry null
at_At1g80270 - mips_02_30 "Unknown protein (At1g80270; F5I6.2)"
mips_04_05_99
mips_08_99
at_At2g03480 - no entry null
at_At2g26680 - no entry null
at_At2g27800 - mips_04_05_99 "hypothetical protein"
at_At2g40280 - no entry null
at_At2g43200 - no entry null
at_At2g43910 - no entry null
at_At2g43920 - no entry null
at_At3g23480 - no entry null
at_At3g23530 - mips_01_07_01 "unknown protein"
mips_06_07_99
at_At3g28460 - no entry null
at_At3g50850 - no entry null
at_At3g56120 - mips_04_03 "unknown protein"
mips_04_03_03
mips_06_07_99
at_At4g00740 - no entry null
at_At4g00750 - no entry null
at_At4g25080 - mips_01_20_99 "magnesium-protoporphyrin IX methyltransferase like protein"
at_At5g13710 - mips_01_06_01 "24-sterol C-methyltransferase"
mips_01_07
mips_01_07_01
mips_40_99
at_At5g44170 - mips_01_01 "putative protein"
mips_06_07_99
------------------
Rule 215
scop_c.87 <= 1.6e-23
seq_gravy > -0.415
seq_wq3_ratio > 0.162
-> class mips_01_20_17_07 "biosynthesis of glycosinolates and derivatives"
Evaluation on training data (2913 items):
at_At1g01420 mips_01_20_17 "flavonol 3-o-glucosyltransferase, putative"
mips_01_20_17_07
mips_01_20_35_01
at_At1g05670 mips_01_05 "UDP glycosyltransferase UGT74E1"
mips_01_20_17
mips_01_20_17_07
at_At1g22360 mips_01_20_17_07 "putative protein"
at_At1g22380 mips_01_05 "hypothetical protein, 5' partial"
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At1g22400 mips_01_20_17 "Putative UDP-glucose glucosyltransferase"
mips_01_20_17_07
at_At1g30530 mips_01_20_17 "putative UDP-gulcoronosyl and UDP-glucosyl transferase family protein"
mips_01_20_17_07
at_At1g50580 mips_01 "rhamnosyltransferase, putative"
mips_01_05
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_99
at_At1g64910 mips_01_20_17_07 "hypothetical protein"
at_At2g15490 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g22590 mips_01_20_17_07 "putative anthocyanidin-3-glucoside rhamnosyltransferase"
at_At2g22930 mips_01_20_17 "putative flavonol 3-O-glucosyltransferase"
mips_01_20_17_07
at_At2g23210 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g23260 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g28080 mips_01_05_01 "putative glucosyltransferase"
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_11_07
at_At2g29750 mips_01_05_01 "putative flavonol 3-O-glucosyltransferase"
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At2g30150 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g31750 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g31790 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g36770 mips_01_20_17_07 "putative glucosyl transferase"
at_At2g43840 mips_01_20_17_07 "putative glucosyltransferase"
at_At3g16520 mips_01_20_17 "glucosyltransferase like protein"
mips_01_20_17_07
at_At3g21750 mips_01_20_17 "putative UDP-glucose glucosyltransferase"
mips_01_20_17_07
at_At3g21780 mips_01_20_17 "putative UDP-glucose glucosyltransferase"
mips_01_20_17_07
at_At3g22250 mips_01_20 "hypothetical protein"
mips_01_20_17
mips_01_20_17_07
at_At3g29630 mips_01_20_17 "flavonol 3-O-Glucosyltransferase, putative"
mips_01_20_17_07
at_At3g46660 mips_01_20_17_07 "glucosyltransferase-like protein"
at_At3g46700 mips_01_20_17 "glucuronosyl transferase-like protein"
mips_01_20_17_07
at_At4g15280 mips_01_20_17 "UTP-glucose glucosyltransferase"
mips_01_20_17_07
at_At4g15500 mips_01_20_17_07 "indole-3-acetate beta-glucosyltransferase like protein"
at_At4g27570 mips_01_20_17 "UDP rhamnose--anthocyanidin-3-glucoside rhamnosyltransferase - like protein"
mips_01_20_17_07
at_At4g36770 mips_01 "glucosyltransferase-like protein"
mips_01_05
mips_01_05_01
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
at_At5g03490 mips_01_05 "UDPG glucosyltransferase - like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At5g05860 mips_01_20_17 "glucuronosyl transferase-like protein"
mips_01_20_17_07
at_At5g05870 mips_01_20_17_07 "glucuronosyl transferase-like protein"
at_At5g05890 mips_01_20_17_07 "glucuronosyl transferase-like protein"
at_At5g12890 mips_01_05_01_03 "glucosyltransferase -like protein"
mips_01_20_17
mips_01_20_17_07
at_At5g17050 mips_01_05_01 "UDP glucose:flavonoid 3-o-glucosyltransferase -like protein"
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At5g38040 mips_01_20_17 "glucosyltransferase-like protein"
mips_01_20_17_07
at_At5g54010 mips_01 "flavonol 3-O-glucosyltransferase-like protein"
mips_01_05
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At5g65550 mips_01_20_17_07 "anthocyanidin-3-glucoside rhamnosyltransferase"
at_At5g66690 mips_01_05 "UTP-glucose glucosyltransferase"
mips_01_20_17
mips_01_20_17_07
Training Accuracy: 41/41 (100.00%)
Training Frequency class 'mips_01_20_17_07': 114/2913 (3.91%)
Evaluation on validation data (1468 items):
at_At1g01390 mips_01_20_17_07 "flavonol 3-o-glucosyltransferase, putative"
mips_01_20_35
mips_01_20_35_01
at_At1g05530 mips_01_20_17_07 "hypothetical protein"
at_At1g07250 mips_01_20_17_07 "putative 3-o-glucosyltransferase"
at_At1g07260 mips_01_20_17 "hypothetical protein"
mips_01_20_17_07
at_At1g22340 mips_01_20_17_07 "hypothetical protein"
at_At1g64920 mips_01_20_17_07 "hypothetical protein"
at_At1g73880 mips_01_06 "putative glucosyltransferase"
mips_01_06_04
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At2g23250 mips_01_20_17 "putative glucosyltransferase"
mips_01_20_17_07
at_At2g26480 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g29740 mips_01_20_17_07 "putative flavonol 3-O-glucosyltransferase"
at_At2g36750 mips_01_20_17 "putative glucosyl transferase"
mips_01_20_17_07
at_At2g36760 mips_01_20_17 "putative glucosyl transferase"
mips_01_20_17_07
at_At2g36780 mips_01_20_17_07 "putative glucosyl transferase"
at_At2g43820 mips_01_20_17_07 "putative glucosyltransferase"
at_At3g21560 mips_01_20_17_07 "UDP-glucose:indole-3-acetate beta-D-glucosyltransferase, putative"
at_At3g46650 mips_01_20_17_07 "glucosyltransferase-like protein"
at_At3g46670 mips_01 "glucosyltransferase-like protein"
mips_01_05
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At3g46680 mips_01_20_17 "glucosyltransferase-like protein"
mips_01_20_17_07
mips_11_07
at_At3g53150 mips_01_20_17_07 "glucosyltransferase - like protein"
at_At4g15260 mips_01_20_17_07 "glucosyltransferase"
at_At5g05880 mips_01_20_17 "glucuronosyl transferase-like protein"
mips_01_20_17_07
mips_11_07
at_At5g14860 - mips_01_05_01_03 "glucosyltransferase -like protein"
mips_01_05_01_03_04
at_At5g17030 mips_01_20_17_07 "UDP glucose:flavonoid 3-o-glucosyltransferase -like protein"
at_At5g37950 mips_01_20_17 "glucuronosyl transferase-like protein"
mips_01_20_17_07
mips_11_07
at_At5g38010 mips_01_20 "glucosyltransferase-like protein"
mips_01_20_17
mips_01_20_17_07
mips_11_07
at_At5g49690 mips_01_20 "anthocyanidin-3-glucoside rhamnosyltransferase-like"
mips_01_20_17
mips_01_20_17_07
Validation Accuracy: 25/26 (96.15%)
Validation Frequency class 'mips_01_20_17_07': 51/1468 (3.47%)
Evaluation on propertest data (2441 items):
at_At1g05560 mips_01_20_17 "UDP-Glucose Transferase (UGT75B2)"
mips_01_20_17_07
at_At1g05680 mips_01_20_17_07 "putative indole-3-acetate beta-glucosyltransferase"
at_At1g06000 mips_01_05 "unknown protein"
mips_01_05_01
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At1g07240 mips_01_20_17_07 "unknown protein"
at_At1g10400 mips_01_20_17 "puative glucosyl transferase"
mips_01_20_17_07
at_At1g22370 mips_01_20 "putative UDP-glucose glucosyltransferase"
mips_01_20_17
mips_01_20_17_07
at_At1g24100 mips_01_20_17_07 "putative indole-3-acetate beta-glucosyltransferase"
at_At1g51210 mips_01_05_01_01_01 "putative glucosyl transferase"
mips_01_20_17_07
at_At1g78270 mips_01_20_17 "similar to glucoronosyl transferase-like protein; similar to ESTs gb|AI996767.1, emb|Z46520.1, gb|T44500.1, and gb|AI099822.1"
mips_01_20_17_07
at_At2g15480 mips_01_20_17_07 "putative glucosyltransferase"
at_At2g16890 - mips_01_05_01_03 "glucosyltransferase like protein"
mips_01_05_01_03_04
at_At2g18560 mips_01_20_17 "putative flavonol 3-O-glucosyltransferase"
mips_01_20_17_07
at_At2g18570 mips_01_20_17_07 "putative flavonol 3-O-glucosyltransferase"
at_At2g29710 mips_01_20_17_07 "putative flavonol 3-O-glucosyltransferase"
at_At2g29730 mips_01_20_17_07 "putative flavonol 3-O-glucosyltransferase"
at_At2g30140 mips_01_20_17 "putative glucosyltransferase"
mips_01_20_17_07
at_At2g36790 mips_01_20_17_07 "putative glucosyl transferase"
at_At2g36970 mips_01_20_17_07 "putative glucosyltransferase"
at_At3g21800 mips_01_05_01 "putative UDP-glucose glucosyltransferase"
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At3g46690 mips_01_20_17_07 "glucuronosyl transferase-like protein"
at_At3g46720 mips_01 "glucuronosyl transferase-like protein"
mips_01_05
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_11
mips_11_07
at_At3g53160 mips_01_20_17_07 "glucosyltransferase - like protein"
at_At3g55700 mips_01_20_17_07 "glucuronosyl transferase - like protein"
at_At3g55710 mips_01 "glucuronosyl transferase - like protein"
mips_01_05
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_11
mips_11_07
mips_99
at_At4g01070 mips_01_20_17_07 "putative flavonol glucosyltransferase"
mips_01_20_35
mips_01_20_35_01
at_At4g09500 mips_01 "putative protein"
mips_01_05
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_99
at_At4g15480 mips_01 "indole-3-acetate beta-glucosyltransferase like protein"
mips_01_05
mips_01_05_01
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_98
at_At4g15490 mips_01_20_17 "indole-3-acetate beta-glucosyltransferase like protein"
mips_01_20_17_07
at_At4g15550 mips_01_05_01 "UDP-glucose:indole-3-acetate beta-D-glucosyltransferase (iaglu)"
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_06_07
at_At4g27560 mips_01_20_17_07 "UDP rhamnose-anthocyanidin-3-glucoside rhamnosyltransferase - like protein"
at_At4g34131 mips_01_20_17_07 "glucosyltransferase -like protein"
at_At4g34135 mips_01_20_17_07 "glucosyltransferase like protein"
at_At4g34138 mips_01_20_17_07 "glucosyltransferase -like protein"
at_At5g05900 mips_01_05 "glucuronosyl transferase-like protein"
mips_01_20
mips_01_20_17
mips_01_20_17_07
at_At5g17040 mips_01_20_17 "UDP glucose:flavonoid 3-o-glucosyltransferase -like protein"
mips_01_20_17_07
at_At5g26310 mips_01_20_17_07 "UTP-glucose glucosyltransferase - like protein"
at_At5g53990 mips_01_20_17 "flavonol 3-O-glucosyltransferase-like protein"
mips_01_20_17_07
at_At5g54060 mips_01_20_17_07 "flavonol 3-O-glucosyltransferase-like"
at_At5g59580 mips_01_20 "glucuronosyl transferase - like protein"
mips_01_20_17
mips_01_20_17_07
at_At5g59590 mips_01_20_17 "glucuronosyl transferase - like protein"
mips_01_20_17_07
mips_11_07
Propertest Accuracy: 39/40 (97.50%)
Propertest Frequency class 'mips_01_20_17_07': 103/2441 (4.22%)
New (unknown) data (1468 items):
at_At2g18700 - mips_01_05_04 "putative trehalose-6-phosphate synthase"
mips_02_19
at_At2g36800 - no entry null
at_At3g21760 - no entry null
at_At3g21790 - no entry null
at_At3g50740 - no entry null
------------------
Rule 224
ss(_1,_3,a,_2),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),ss(_1,_4,b,_5),notequal(_5,_2),notequal(_5,_4),notequal(_5,_3),ss(_1,_5,a,_6),notequal(_6,_4),notequal(_6,_5),notequal(_6,_2),notequal(_6,_3) = 0
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,38820.0-54204.0),sq_len(_2,15.0-349.0) = 1
scop_b.82 <= 0.0039
seq_dc2_ratio <= 0.45
ss(_1,_3,c,_2),c_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,0.0-13.03) = 0
-> class mips_01_20_17_07 "biosynthesis of glycosinolates and derivatives"
Evaluation on training data (2913 items):
at_At1g03400 mips_01_01_99 "putative 1-aminocyclopropane-1-carboxylate oxidase"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g06620 mips_01_01_99 "oxidoreductase, putative"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g12010 mips_01_20_17_07 "putative amino-cyclopropane-carboxylic acid oxidase (ACC oxidase)"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g14130 mips_01_20_17_07 "dioxygenase-like protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g15540 mips_01_01_99 "hypothetical protein"
mips_01_20_17
mips_01_20_17_07
at_At1g17010 mips_01_20 "SRG1-like protein"
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g30040 mips_01_20_17 "unknown protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g44090 mips_01_20_17 "gibberelin 20-oxidase, putative"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g47990 mips_01_20_17_07 "dioxygenase, putative"
mips_20_20
mips_20_20_18
at_At1g52790 mips_01_01_99 "putative oxidoreductase"
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g60980 mips_01_01_99 "putative gibberellin 20-oxidase"
mips_01_20_13
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g62380 mips_01_01 "Unknown protein (F24O1.10)"
mips_01_01_99
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g80330 mips_01_20_13 "putative gibberellin 3 beta-hydroxylase"
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g80340 mips_01_20 "gibberellin 3 beta-hydroxylase"
mips_01_20_13
mips_01_20_17
mips_01_20_17_07
mips_20
mips_20_20
mips_20_20_18
at_At2g25450 mips_01_01 "putative dioxygenase"
mips_01_01_99
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At2g44800 mips_01_01_99 "putative flavonol synthase"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At3g12900 mips_01_01_99 "hypothetical protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g46500 mips_01_20_17_07 "putative protein"
at_At3g49620 mips_01_20_17_07 "2-oxoacid-dependent oxidase (din11)"
mips_01_20_35_01_05
at_At3g50210 mips_01_20_17_07 "flavonol synthase - like protein"
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_20_20
mips_20_20_18
at_At3g60290 mips_01_01_99 "SRG1 - like protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At4g03050 mips_01_20_17_07 "2-oxoglutarate-dependent dioxygenase (AOP3)"
mips_20_20
mips_20_20_18
at_At4g03060 mips_01_20 "putative oxidoreductase"
mips_01_20_17
mips_01_20_17_07
mips_20
mips_20_20
mips_20_20_18
at_At4g10490 mips_01_20_17 "putative flavanone 3-beta-hydroxylase"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g10500 mips_01_20_17_07 "putative Fe(II)/ascorbate oxidase"
mips_01_20_35_01
at_At4g16770 mips_01_01_99 "gibberellin oxidase-like protein"
mips_01_20_17
mips_01_20_17_07
mips_14
mips_14_01_05
mips_20_20
mips_20_20_18
at_At4g21200 mips_01_01_99 "gibberellin 20-oxidase - like protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At4g23340 mips_01_01_99 "putative protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At4g25310 mips_01_01_99 "SRG1-like protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At5g07200 mips_01_01_99 "gibberellin 20-oxidase"
mips_01_20_13
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g07480 mips_01_20_17 "putative protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At5g08640 mips_01_20_17 "flavonol synthase (FLS) (sp|Q96330)"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g20400 mips_01_20_17 "ethylene-forming-enzyme-like dioxygenase-like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g24530 mips_01_20_17 "flavanone 3-hydroxylase-like protein"
mips_01_20_17_07
at_At5g43450 mips_01_01_99 "1-aminocyclopropane-1-carboxylate oxidase"
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At5g54000 mips_01_20_17 "ethylene-forming-enzyme-like dioxygenase"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g58660 mips_01 "putative protein"
mips_01_01
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20
mips_20_20
mips_20_20_18
mips_98
at_At5g59540 mips_01 "1-aminocyclopropane-1-carboxylate oxidase - like protein"
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
mips_98
at_At5g63580 mips_01 "flavonol synthase"
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_10
mips_20_20
mips_20_20_18
mips_98
at_At5g63590 mips_01_01 "flavonol synthase"
mips_01_01_99
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g63600 mips_01_20_17_07 "1-aminocyclopropane-1-carboxylic acid oxidase-like protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
Training Accuracy: 41/41 (100.00%)
Training Frequency class 'mips_01_20_17_07': 114/2913 (3.91%)
Evaluation on validation data (1468 items):
at_At1g02400 mips_01_01_99 "hypothetical protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g06640 mips_01_01 "putative Iron/Ascorbate oxidoreductase family protein"
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_10_05
mips_20
mips_20_20
mips_20_20_18
at_At1g15550 mips_01_20_13 "putative protein"
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g15990 - mips_10_01_09 ""
mips_10_01_09_07
mips_10_05_01
mips_10_05_01_10
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_47_03_03
mips_47_03_03_01
mips_67_01
mips_67_01_01
at_At1g17020 mips_01_20_17 "SRG1-like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g52810 mips_01_20 "putative oxidoreductase"
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_10_05
mips_20
mips_20_20
mips_20_20_18
at_At1g77330 mips_01_01_99 "unknown protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At2g19590 mips_01_20_17_07 "1-aminocyclopropane-1-carboxylate oxidase"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g19010 mips_01_20_17_07 "oxidase like protein"
at_At4g21690 mips_01_20_13 "gibberellin 3 beta-hydroxylase - like protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At4g25300 mips_01_01_99 "SRG1-like protein"
mips_01_20_17_07
at_At5g20550 mips_01_20_17_07 "ethylene-forming-enzyme-like dioxygenase - like"
at_At5g51310 mips_01_20_17_07 "gibberellin 20-oxidase-like protein"
mips_20_20
mips_20_20_18
at_At5g59530 mips_01_01 "1-aminocyclopropane-1-carboxylate oxidase - like protein"
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_20
mips_20_20
mips_20_20_18
Validation Accuracy: 13/14 (92.86%)
Validation Frequency class 'mips_01_20_17_07': 51/1468 (3.47%)
Evaluation on propertest data (2441 items):
at_At1g03410 mips_01_01 "putative 1-aminocyclopropane-1-carboxylate oxidase"
mips_01_01_99
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g04350 mips_01_01_99 "putative 1-aminocyclopropane-1-carboxylate oxidase"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g04380 mips_01_01 "putative 1-aminocyclopropane-1-carboxylate oxidase"
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_20
mips_20_20
mips_20_20_18
at_At1g05010 mips_01_20 "1-aminocyclopropane-1-carboxylate oxidase"
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_10_05
mips_20
mips_20_20
mips_20_20_18
at_At1g06650 mips_01 "oxidoreductase, putative"
mips_01_01
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_10
mips_10_05
mips_20
mips_20_20
mips_20_20_18
mips_98
at_At1g14120 mips_01_01_99 "dioxygenase like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g28030 mips_01_20 "hypothetical protein"
mips_01_20_17
mips_01_20_17_07
mips_20
mips_20_20
mips_20_20_18
at_At1g35190 mips_01_20_17 "hyoscyamine 6-dioxygenase hydroxylase, putative"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g49390 mips_01_20_17_07 "hypothetical protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At1g50960 mips_01_01_99 "hypothetical protein"
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g52800 mips_01_01 "putative oxidoreductase"
mips_01_01_99
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g52820 mips_01_20_17_07 "putative oxidoreductase"
at_At1g55290 mips_01_01_99 "leucoanthocyanidin dioxygenase 2, putative"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g74820 - mips_01_05_01_01 "germin-like protein"
mips_01_05_01_01_03
mips_02_13
at_At1g78440 mips_01_20_17_07 "putative dioxygenase"
mips_20_20
mips_20_20_18
at_At1g78550 mips_01_01_99 "Hypothetical protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At1g80320 mips_01_20_17 "oxidoreductase like protein"
mips_01_20_17_07
mips_10
at_At2g06960 mips_01_01_99 "1-aminocyclopropane-1-carboxylate oxidase"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At2g30830 mips_01_01_99 "putative dioxygenase"
mips_01_20_17
mips_01_20_17_07
mips_01_20_35_01
at_At2g36690 mips_01_01_99 "putative giberellin beta-hydroxylase"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At2g38240 mips_01_20_17_07 "putative anthocyanidin synthase"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g11180 mips_01_01_99 "putative leucoanthocyanidin dioxygenase"
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At3g13610 mips_01_01_99 "unknown protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At3g19000 mips_01_20_17 "unknown protein"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At3g21420 mips_01_20_17 "unknown protein"
mips_01_20_17_07
at_At3g46480 mips_01_20 "putative protein"
mips_01_20_17
mips_01_20_17_07
mips_10_05
mips_20
mips_20_20
mips_20_20_18
at_At3g47190 mips_01_01_99 "1-aminocyclopropane-1-carboxylic acid oxidase - like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g49630 mips_01_20_17_07 "putative protein"
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_20_20
mips_20_20_18
at_At3g51240 mips_01_20_17 "flavanone 3-hydroxylase (FH3)"
mips_01_20_17_07
at_At3g55970 mips_01_20_17 "leucoanthocyanidin dioxygenase -like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At3g61400 mips_01_01_99 "1-aminocyclopropane-1-carboxylate oxidase-like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g03070 mips_01_01_99 "putative oxidoreductase"
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At4g16330 mips_01_20_17_07 "naringenin 3-dioxygenase like protein"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g22870 mips_01_01_99 "anthocyanidin synthase - like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g22880 mips_01_20_17_07 "putative leucoanthocyanidin dioxygenase (LDOX)"
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At4g25420 mips_01_01 "gibberellin 20-oxidase"
mips_01_01_99
mips_01_20_17
mips_01_20_17_07
mips_20_20
mips_20_20_18
at_At5g05600 mips_01_01_99 "leucoanthocyanidin dioxygenase-like protein"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_20_20
mips_20_20_18
at_At5g43440 mips_01_01 "1-aminocyclopropane-1-carboxylate oxidase"
mips_01_01_99
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_20
mips_20_20
mips_20_20_18
at_At5g51810 mips_01_20_17 "gibberellin 20-oxidase (emb|CAA58294.1)"
mips_01_20_17_07
Propertest Accuracy: 38/39 (97.44%)
Propertest Frequency class 'mips_01_20_17_07': 103/2441 (4.22%)
New (unknown) data (1468 items):
at_At1g79760 - no entry null
at_At2g18540 - mips_13_07 "putative vicilin storage protein (globulin-like)"
mips_25_05_15
mips_35
mips_35_03
mips_35_03_12
mips_40_27
mips_63_06
mips_63_07
mips_65
at_At2g38500 - no entry null
at_At3g45880 - mips_01_06_04 "phospholipase - like protein"
at_At3g46490 - mips_01_01_99 "putative protein"
mips_20_20
mips_20_20_18
at_At4g36700 - mips_65 "globulin-like protein"
at_At5g48020 - no entry null
------------------
Rule 699
scop_c > 0.02
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
seq_dw5_ratio <= 0.199
seq_di10_ratio <= 0.604
seq_gravy > -0.415
ss(_1,_3,b,_2),b_len(_3,1.0-3.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),a_len(_4,11.0-15.0) = 0
scop_b.82 > 0.0039
seq_ct1_ratio <= 0.204
seq_wp4_ratio <= 0.208
ss(_1,_3,b,_2),c_len(_2,6.0-9.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),a_len(_4,9.0-11.0) = 0
ss(_1,_3,c,_2),c_len(_3,15.0-30.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,5.15-11.94) = 1
seq_sd9_ratio <= 0.6
eval(_1,_2,0.0-9.0e-25),sq_len(_2,1005.0-6487.0),desc(_2,in) = 0
-> class mips_01_20_17_07 "biosynthesis of glycosinolates and derivatives"
Evaluation on training data (2913 items):
at_At1g11600 mips_01_20_17 "cytochrome P450 like protein"
mips_01_20_17_07
at_At1g13710 mips_01_20_17 "hypothetical protein"
mips_01_20_17_07
at_At1g33720 mips_01_20_17 "cytochrome P450, putative"
mips_01_20_17_07
mips_11_07
mips_11_07_01
at_At1g64930 mips_01_20_17_07 "hypothetical protein"
at_At2g12190 mips_01_20_17 "pseudogene"
mips_01_20_17_07
at_At2g25160 mips_01_20_17 "putative cytochrome P450"
mips_01_20_17_07
at_At2g42250 mips_01_20 "putative cytochrome P450"
mips_01_20_17
mips_01_20_17_07
mips_11_07
mips_11_07_01
at_At2g45550 mips_01_20_17_07 "putative cytochrome P450"
mips_11_07_01
at_At2g45560 mips_01_20_17 "cytochrome P450 like protein"
mips_01_20_17_07
mips_11_07_01
at_At2g45580 mips_01_20_17_07 "putative cytochrome P450"
mips_11_07_01
at_At2g46660 mips_01_20_17_07 "putative cytochrome P450"
mips_11_07_01
at_At3g52970 mips_02 "cytochrome P450 - like protein"
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_02_11
mips_11_07
mips_11_07_01
at_At3g61040 mips_01_20 "cytochrome P450 monooxygenase-like protein"
mips_01_20_17
mips_01_20_17_07
mips_11_07
mips_11_07_01
at_At4g12310 mips_01_20_17_07 "flavonoid 3',5'-hydroxylase -like protein"
at_At4g12320 mips_01_20_17_07 "cytochrome P450 homolog"
mips_11_07_01
at_At4g22710 mips_01_20_17 "cytochrome P450 - like protein"
mips_01_20_17_07
mips_11_07_01
at_At4g37310 - mips_01_20_35 "cytochrome P450-like protein"
mips_01_20_35_01
mips_01_20_99
mips_02_11
at_At4g37430 mips_01_20_17_07 "cytochrome P450 monooxygenase (CYP91A2)"
mips_01_20_35
mips_01_20_35_01
mips_01_20_99
at_At4g39510 mips_01_20_17 "cytochrome P450 -like protein"
mips_01_20_17_07
at_At5g05260 mips_01 "cytochrome P450 CYP79A2 (CYP79A2)"
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_98
at_At5g06900 mips_01_20_17_07 "cytochrome P450"
mips_11_07_01
at_At5g09970 mips_01_20_17_07 "cytochrome P450"
at_At5g10610 mips_01_20_17_07 "cytochrome P450 - like protein"
mips_01_20_35
mips_01_20_35_01
mips_11_07_01
at_At5g44620 mips_01_20_17_07 "flavonoid 3',5'-hydroxylase-like; cytochrome P450"
at_At5g47990 mips_01_20_17_07 "cytochrome P450"
Training Accuracy: 24/25 (96.00%)
Training Frequency class 'mips_01_20_17_07': 114/2913 (3.91%)
Evaluation on validation data (1468 items):
at_At1g01280 mips_01 "cytochrome P450, putative"
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_02_11
mips_11
mips_11_07_01
mips_98
at_At1g16400 mips_01_20_17 "cytochrome P450-like protein (At1g16400)"
mips_01_20_17_07
mips_11_07
mips_11_07_01
at_At1g16410 mips_01_20_17 "putative cytochrome P450 protein"
mips_01_20_17_07
mips_11_07_01
at_At1g64940 mips_01_20 "hypothetical protein"
mips_01_20_17
mips_01_20_17_07
mips_11_07
mips_11_07_01
at_At1g64950 mips_01 "unknown protein"
mips_02
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_02_11
mips_40
mips_63
mips_98
mips_99
at_At2g22330 mips_01_20_17 "putative cytochrome P450"
mips_01_20_17_07
mips_02_11
mips_11_07
mips_11_07_01
at_At2g23220 - mips_01_20_35 "putative cytochrome P450"
mips_01_20_35_01
mips_01_20_99
at_At2g37020 - mips_03_01_05_03 "translin-like protein"
mips_40_10_03
mips_63_03_01
at_At2g44550 - mips_01_05_01_01 "putative glucanase"
at_At3g24460 - mips_47_03_15 "unknown protein"
mips_47_03_15_05
at_At3g29380 - mips_04_01 "transcription initiation factor IIB, putative"
mips_04_01_01
mips_04_03
mips_04_03_01
mips_04_05_01_01
mips_04_05_01_04_01
at_At3g44970 - mips_01_01_01 "cytochrome P450 - like protein"
mips_01_01_10
mips_01_02
mips_01_02_99
mips_01_06_01
mips_01_06_01_07
mips_01_06_01_07_11
mips_01_06_04
mips_01_07
mips_01_20_99
mips_02_11
mips_11_05_03
mips_11_07
mips_11_07_01
mips_11_10
mips_11_10_09
mips_11_10_99
mips_13_11_03
mips_13_11_03_05
mips_40_07
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
at_At3g61880 mips_02 "cytochrome p450 (CYP78A9)"
mips_01_06
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_02_11
mips_11
mips_11_07
mips_11_07_01
at_At4g22690 mips_01_20_17 "cytochrome P450 like protein"
mips_01_20_17_07
mips_11_07
mips_11_07_01
at_At4g24230 - mips_62_02_01_02 "putative protein"
mips_63_09
at_At4g37320 - mips_01_20 "cytochrome P450-like protein"
mips_01_20_35
mips_01_20_35_01
mips_01_20_99
at_At4g37400 - mips_01_20_35 "cytochrome P450 monooxygenase -like protein"
mips_01_20_35_01
mips_01_20_99
at_At5g57220 mips_01_20_17 "cytochrome P450"
mips_01_20_17_07
mips_01_20_35
mips_01_20_35_01
mips_01_20_99
Validation Accuracy: 9/18 (50.00%)
Validation Frequency class 'mips_01_20_17_07': 51/1468 (3.47%)
Evaluation on propertest data (2441 items):
at_At1g05160 - mips_02 "putative cytochrome P450"
mips_01_06
mips_01_06_01
mips_02_11
mips_40_07
mips_45
mips_45_03
mips_45_03_15
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
at_At1g27520 - mips_01_05_01_01_02 "unknown protein"
mips_63_17_01
at_At1g63710 - mips_45 "cytochrome P450 like protein"
mips_45_03
mips_45_03_15
mips_47_03_15
mips_47_03_15_07
at_At2g30490 - mips_01_06_04 "cinnamate-4-hydroxylase"
mips_01_07
mips_01_20_99
mips_11_05_03
mips_11_07_01
mips_11_10
mips_11_10_09
mips_11_10_99
mips_13_11_03
mips_13_11_03_05
at_At2g40890 mips_01_20 "cytochrome P450 like protein"
mips_01_20_17
mips_01_20_17_07
mips_11
mips_11_07
mips_11_07_01
at_At2g45570 mips_01_20_17_07 "cytochrome P450 (CYP76C2)"
mips_11_07_01
at_At3g10570 mips_01_20_17 "putative cytochrome P450"
mips_01_20_17_07
mips_11_07_01
at_At3g25180 mips_01_20_17_07 "cytochrome P450 monooxygenase, putative"
mips_11_07_01
at_At4g12300 mips_01_20_17_07 "flavonoid 3',5'-hydroxylase -like protein"
mips_11_07_01
at_At4g12330 mips_01_20 "flavonoid 3',5'-hydroxylase like protein"
mips_01_20_17
mips_01_20_17_07
mips_11_07
mips_11_07_01
at_At4g15360 mips_01_20_17 "cytochrome P450 like protein"
mips_01_20_17_07
at_At4g31940 mips_01_20 "Cytochrome P450-like protein"
mips_01_20_17
mips_01_20_17_07
at_At4g31970 mips_01_20_17 "Cytochrome P450-like protein"
mips_01_20_17_07
at_At4g36220 - mips_01_20_35_01 "ferulate-5-hydroxylase (FAH1)"
at_At4g39950 mips_01_20_17_07 "cytochrome P450 like protein"
mips_01_20_35
mips_01_20_35_01
at_At5g04630 mips_01_20 "cytochrome P450 - like protein"
mips_01_20_17
mips_01_20_17_07
mips_11
mips_11_07
mips_11_07_01
at_At5g04660 mips_01_20_17_07 "cytochrom P450 - like protein"
mips_11_07_01
at_At5g06905 mips_01_20_17 "cytochrome P450-like protein"
mips_01_20_17_07
mips_11_07_01
at_At5g07990 mips_01 "flavonoid 3'-hydroxylase - like protein"
mips_01_20
mips_01_20_17
mips_01_20_17_07
mips_11
mips_11_07
mips_11_07_01
mips_98
mips_99
at_At5g42650 mips_01_20_17_07 "allene oxide synthase (emb|CAA73184.1)"
at_At5g43710 - mips_01_05_01_01_02 "unknown protein"
mips_63_17
mips_63_17_01
at_At5g48000 - mips_01_06_01_07 "cytochrome P450-like protein"
mips_01_06_01_07_11
mips_11_07_01
Propertest Accuracy: 15/22 (68.18%)
Propertest Frequency class 'mips_01_20_17_07': 103/2441 (4.22%)
New (unknown) data (1468 items):
at_At1g01190 - mips_11_07_01 "cytochrome P450, putative"
at_At1g08640 - no entry null
at_At1g13090 - mips_11_07_01 "cytochrome P450 monooxygenase like protein"
at_At1g13100 - mips_11_07_01 "putative cytochrome P450 monooxygenase"
at_At1g13110 - mips_01_20 "putative cytochrome P450 monooxygenase"
mips_11_07
mips_11_07_01
at_At1g31330 - no entry null
at_At1g36810 - no entry null
at_At1g50520 - mips_02_11 "cytochrome P450, putative"
at_At1g50560 - mips_02_11 "cytochrome P450, putative"
mips_11_07
mips_11_07_01
at_At1g54500 - no entry null
at_At1g58230 - no entry null
at_At1g59550 - no entry null
at_At1g64900 - mips_02_11 "putative protein"
at_At1g70670 - no entry null
at_At1g73340 - no entry null
at_At1g74110 - no entry null
at_At1g77140 - mips_08_07 "unknown protein"
mips_08_07_07
mips_08_07_27
mips_08_16
mips_08_16_05
mips_13_03
mips_13_03_01
mips_13_03_99
mips_30_02
mips_30_03
mips_30_09
mips_30_25
mips_40_08
mips_40_09
mips_40_25
at_At1g77830 - no entry null
at_At1g80680 - mips_04_03 "hypothetical protein"
mips_04_03_03
mips_04_07
mips_08_01
mips_40_10_05
at_At2g24180 - mips_11_07_01 "putative cytochrome P450"
at_At2g26170 - mips_01_06_04 "Cytochrome P450 like protein"
mips_11_07_01
at_At2g30750 - no entry null
at_At2g30770 - mips_11_07_01 "putative cytochrome P450"
at_At2g42850 - mips_01_06 "putative cytochrome P450"
at_At2g44090 - no entry null
at_At3g10560 - mips_01 "putative cytochrome P450"
mips_02
mips_01_06
mips_01_20
mips_02_11
mips_11
mips_11_07
mips_11_07_01
mips_63
mips_98
at_At3g20080 - no entry null
at_At3g20090 - no entry null
at_At3g20100 - no entry null
at_At3g20110 - mips_02 "cytochrome P450, putative"
mips_01_20
mips_02_11
at_At3g20120 - mips_01_20 "cytochrome P450, putative"
at_At3g20940 - mips_02_11 "cytochrome P450, putative"
at_At3g20960 - no entry null
at_At3g26170 - mips_11_07_01 "cytochrome P450, putative"
at_At3g26180 - mips_11_07_01 "cytochrome P450 like protein"
at_At3g26200 - mips_11_07_01 "cytochrome P450 like protein"
at_At3g26270 - mips_02_11 "cytochrome P450, putative"
mips_11_07
mips_11_07_01
at_At3g26280 - mips_01 "cytochrome P450 monooxygenase (CYP71B4)"
mips_02
mips_01_20
mips_02_11
mips_11
mips_11_07
mips_11_07_01
mips_63
mips_98
at_At3g26300 - mips_11_07_01 "cytochrome P450, putative"
at_At3g26310 - mips_11_07_01 "cytochrome P450, putative"
at_At3g26320 - mips_11_07_01 "cytochrome P450, putative"
at_At3g26330 - mips_11_07_01 "cytochrome P450, putative"
at_At3g26830 - mips_11_07 "putative cytochrome P450"
mips_11_07_01
at_At3g27830 - no entry null
at_At3g28750 - no entry null
at_At3g44250 - mips_01 "cytochrome P450-like protein"
mips_01_20
mips_11
mips_11_07
mips_11_07_01
mips_98
at_At3g48290 - mips_11_07 "cytochrome P450 - like protein"
mips_11_07_01
at_At3g48310 - mips_11_07_01 "cytochrome P450 - like protein"
at_At3g48320 - mips_11_07 "cytochrome P450 - like protein"
mips_11_07_01
at_At3g48520 - mips_01_06 "cytochrome P450-like protein"
mips_01_06_99
at_At3g50780 - no entry null
at_At3g52980 - no entry null
at_At3g53280 - mips_11_07 "cytochrome P450 monooxygenase (CYP71B5)"
mips_11_07_01
at_At3g53300 - mips_02_11 "CYTOCHROME P450-like protein"
mips_11_07
mips_11_07_01
at_At4g12120 - mips_08_07_07 "putative protein"
mips_08_07_27
mips_08_16
mips_08_16_05
mips_13_03_99
mips_30_02
mips_30_03
mips_30_09
mips_40_09
at_At4g12800 - no entry null
at_At4g13290 - no entry null
at_At4g13310 - no entry null
at_At4g13770 - mips_11_07_01 "cytochrome P450 monooxygenase (CYP83A1)"
at_At4g15300 - no entry null
at_At4g16270 - mips_11_07 "peroxidase like protein"
at_At4g30880 - no entry null
at_At4g31500 - mips_11_07_01 "cytochrome P450 monooxygenase (CYP83B1)"
at_At4g35870 - no entry null
at_At4g37340 - mips_01_20_99 "cytochrome P450-like protein"
at_At5g24650 - no entry null
at_At5g24950 - no entry null
at_At5g24960 - no entry null
at_At5g25120 - mips_11_07_01 "cytochrome P450-like protein"
at_At5g25130 - no entry null
at_At5g25140 - no entry null
at_At5g25180 - mips_11_07_01 "cytochrome P450 71B1 - like protein"
at_At5g25900 - mips_01_20_13 "cytochrome P450 GA3"
mips_11_07_01
mips_20_20
mips_20_20_18
at_At5g27830 - no entry null
at_At5g42590 - mips_11_07_01 "cytochrome P450"
at_At5g50930 - no entry null
at_At5g51740 - no entry null
at_At5g55110 - no entry null
at_At5g55460 - no entry null
at_At5g57260 - mips_11_07_01 "cytochrome P450"
at_At5g65110 - mips_01_06_04 "acyl-CoA oxidase (gb|AAC13497.1)"
mips_30_19
mips_40_19
at_At5g66630 - mips_11 "putative protein"
mips_11_01
mips_11_05
mips_11_05_01
mips_11_05_03
at_At5g66650 - no entry null
------------------
Rule 584
eval(_1,_2,4.0e-3-0.1),classification(_2,campylobacterales),db_ref(_2,prosite) = 0
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
scop_d <= 0.0045
ss(_1,_3,c,_2),c_len(_3,15.0-30.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),beta_dist(_1,5.15-11.94) = 0
eval(_1,_2,9.0e-25-8.0e-10),classification(_2,viridiplantae),db_ref(_2,smart) = 0
eval(_1,_2,0.0-9.0e-25),keyword(_2,transmembrane),desc(_2,precursor) = 1
scop_b.82 > 0.0039
eval(_1,_2,0.0-9.0e-25),classification(_2,bacteria),db_ref(_2,interpro) = 1
-> class mips_01_20_17_09 "biosynthesis of alkaloids"
Evaluation on training data (2913 items):
at_At1g26380 mips_01_05_01_01_01 "putative protein"
mips_01_20_17
mips_01_20_17_09
mips_02_16
at_At1g26400 mips_01_05_01_01_01 "hypothetical protein"
mips_01_20_17_09
mips_02_16
at_At1g26410 mips_01_20_17_09 "unknown protein"
mips_01_20_99
mips_20_20
mips_20_20_18
at_At1g26420 mips_02 "hypothetical protein"
mips_01_05_01
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_02_16
mips_02_16_03
mips_40_16
mips_67_15
at_At1g30710 mips_01_20_17_09 "putative reticuline oxidase-like protein"
mips_01_20_99
mips_02_99
mips_20_20
mips_20_20_18
at_At1g75450 - mips_02 "cytokinin oxidase (CKX6)"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_07
mips_01_07_01
mips_01_20
mips_01_20_99
mips_02_16
mips_02_16_03
mips_02_99
mips_14
mips_14_04
mips_20
mips_20_20
mips_20_20_18
mips_25
mips_30
mips_30_04
mips_40_03
mips_40_04
mips_40_16
mips_67
mips_67_15
at_At2g27150 mips_01_03 "aldehyde oxidase (AO-3)"
mips_01_03_01
mips_01_03_01_01
mips_01_03_01_01_03
mips_01_20_17
mips_01_20_17_09
mips_02_11
mips_11_07
mips_11_07_07
mips_40_19
mips_67_15
at_At2g34790 mips_01 "putative berberine bridge enzyme"
mips_01_05
mips_01_05_01
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_01_20_99
mips_14
mips_14_04
mips_20
mips_20_20
mips_20_20_18
mips_25
mips_67
mips_67_15
mips_99
at_At3g63440 mips_01 "cytokinin oxidase -like protein"
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_01_20_99
mips_02_16
mips_02_16_03
mips_02_99
mips_11
mips_11_01
mips_20
mips_20_20
mips_20_20_18
mips_30
mips_30_04
mips_40
mips_40_03
mips_40_04
mips_40_16
at_At4g20800 mips_02 "putative protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_02_16
mips_40_04
mips_40_16
at_At4g20840 mips_01_20_17_09 "reticuline oxidase - like protein"
at_At4g20860 mips_01_05_01_01_01 "berberine bridge enzyme - like protein"
mips_01_20_17_09
mips_02_16
mips_02_99
at_At4g34900 mips_01_03 "xanthine dehydrogenase"
mips_01_03_01
mips_01_03_01_01
mips_01_03_01_01_03
mips_01_20_17
mips_01_20_17_09
mips_02_11
mips_11_07
mips_11_07_07
mips_40_19
mips_67_15
at_At5g11540 mips_01_05_01_01_01 "putative protein"
mips_01_07_01
mips_01_20_17_09
mips_02_16
mips_02_99
mips_40_19
at_At5g44380 mips_01_06 "berberine bridge enzyme-like protein"
mips_01_20_17
mips_01_20_17_09
mips_02_16
mips_40_19
mips_67_15
at_At5g44410 mips_01_20_17_09 "berberine bridge enzyme-like protein"
Training Accuracy: 15/16 (93.75%)
Training Frequency class 'mips_01_20_17_09': 21/2913 (0.72%)
Evaluation on validation data (1468 items):
at_At1g01980 mips_01_20_17_09 "hypothetical protein"
mips_01_20_99
mips_02_16
mips_20_20
mips_20_20_18
at_At3g43600 mips_01 "putative aldehyde oxidase (AO3)"
mips_01_03
mips_02
mips_01_03_01
mips_01_03_01_01
mips_01_03_01_01_03
mips_01_05
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_02_11
mips_11
mips_11_01
mips_11_07
mips_11_07_07
mips_13
mips_13_11
mips_40_19
mips_67
mips_67_15
at_At4g00060 - mips_03 "unknown protein"
mips_03_01
mips_03_01_03
mips_03_01_05
mips_03_03
mips_03_03_01
mips_03_03_04
mips_03_03_04_03
at_At4g16130 - mips_01 "galactokinase like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_04
mips_01_20
mips_01_20_01
mips_04
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_40_03
mips_63
mips_63_13
mips_63_13_01
mips_63_19
mips_63_19_03
at_At4g34890 mips_01_03_01 "xanthine dehydrogenase - like protein"
mips_01_03_01_01
mips_01_03_01_01_03
mips_01_20_17_09
mips_11_07_07
mips_13_11
mips_40_19
at_At4g36400 - mips_01 "unknown protein"
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_06
mips_01_06_01
mips_02_16
mips_02_16_03
mips_02_99
mips_14
mips_14_04
mips_25
mips_30
mips_30_04
mips_40_03
mips_40_04
mips_40_16
mips_40_19
mips_67
mips_67_15
at_At5g06580 - mips_01_05_01_01_01 "unknown protein"
mips_02_16
mips_02_16_03
mips_02_99
mips_40_19
Validation Accuracy: 3/7 (42.86%)
Validation Frequency class 'mips_01_20_17_09': 5/1468 (0.34%)
Evaluation on propertest data (2441 items):
at_At1g04580 mips_01_03 "aldehyde oxidase (AAO4)"
mips_01_03_01
mips_01_03_01_01
mips_01_03_01_01_03
mips_01_20_17
mips_01_20_17_09
mips_02_11
mips_11_07
mips_11_07_07
mips_40_19
mips_67_15
at_At1g11770 mips_01_20_17_09 "putative reticuline oxidase"
mips_01_20_99
mips_20_20
mips_20_20_18
at_At1g26390 mips_01 "putative protein"
mips_01_05
mips_01_05_01
mips_01_06
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_30
mips_30_04
mips_40_16
mips_40_19
mips_67
mips_67_15
at_At1g30720 mips_01 "putative reticuline oxidase-like protein"
mips_01_05
mips_01_05_01
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_01_20_99
mips_20
mips_20_20
mips_20_20_18
mips_40_04
at_At1g30740 mips_01_20_17_09 "putative reticuline oxidase-like protein"
mips_02_16
mips_40_19
at_At1g32300 mips_02 "hypothetical protein"
mips_01_06
mips_01_06_01
mips_01_07
mips_01_07_01
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_01_20_99
mips_02_99
mips_20
mips_20_20
mips_20_20_18
mips_40_04
mips_40_16
mips_40_19
mips_67_15
at_At2g19500 mips_01_05_01_01_01 "cytokinin oxidase (CKX2)"
mips_01_07_01
mips_01_20_17_09
mips_01_20_99
mips_02_16
mips_02_99
mips_20_20
mips_20_20_18
at_At2g34810 mips_01_05_01 "putative berberine bridge enzyme"
mips_01_20
mips_01_20_17
mips_01_20_17_09
mips_01_20_99
mips_20
mips_20_20
mips_20_20_18
mips_40_04
at_At2g46740 mips_01_07_01 "unknown protein"
mips_01_20_17_09
mips_01_20_99
mips_02_99
mips_20_20
mips_20_20_18
at_At3g19820 - mips_01_05_01_01 "cell elongation protein, Dwarf1"
mips_01_05_01_01_01
mips_02_16
mips_02_16_03
mips_02_99
mips_40_19
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
at_At3g55360 - mips_01_06 "synaptic glycoprotein SC2-like protein"
mips_01_06_01
mips_01_06_99
mips_01_20
mips_20
mips_20_25
mips_20_25_07
mips_20_25_07_07
mips_25
mips_25_05
mips_25_05_23
mips_37
mips_37_03
mips_37_03_15
mips_45
mips_45_03
mips_45_03_15
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_67
mips_67_15
at_At4g20830 mips_01_20_17 "reticuline oxidase -like protein"
mips_01_20_17_09
at_At5g20960 mips_01_03 "aldehyde oxidase AAO1"
mips_01_03_01
mips_01_03_01_01
mips_01_03_01_01_03
mips_01_20_17
mips_01_20_17_09
mips_02_11
mips_11_07
mips_11_07_07
mips_40_19
mips_67_15
at_At5g44360 mips_01_20_17_09 "berberine bridge enzyme"
mips_02_99
mips_40_19
at_At5g44390 mips_01_20_17_09 "berberine bridge enzyme-like protein"
at_At5g44440 mips_01_20 "berberine bridge enzyme-like protein"
mips_01_20_17
mips_01_20_17_09
mips_02_16
mips_02_99
mips_40_04
mips_40_16
at_At5g56970 - mips_01_20_99 "cytokinin oxidase"
mips_02_16
mips_02_99
mips_20_20
mips_20_20_18
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_01
Propertest Accuracy: 14/17 (82.35%)
Propertest Frequency class 'mips_01_20_17_09': 16/2441 (0.66%)
New (unknown) data (1468 items):
at_At1g07670 - mips_01 "endoplasmic reticulum-type calcium-transporting ATPase 4 (ECA4)"
mips_13
mips_13_05
mips_13_07
mips_25
mips_25_05
mips_25_05_09
mips_40_02
mips_40_07
mips_63
mips_63_17
mips_63_17_01
mips_63_19
mips_67
mips_67_04
mips_67_50
mips_67_50_22
mips_67_50_25
at_At1g13900 - mips_06 "hypothetical protein"
mips_10
at_At1g15170 - no entry null
at_At1g15180 - no entry null
at_At1g20980 - no entry null
at_At1g65320 - no entry null
at_At1g70340 - no entry null
at_At1g71810 - no entry null
at_At2g04740 - no entry null
at_At2g41510 - mips_02 "putative cytokinin oxidase"
mips_01_05_01
mips_01_06
mips_01_06_01
mips_01_07
mips_01_07_01
mips_01_20
mips_01_20_99
mips_02_16
mips_20
mips_20_20
mips_20_20_18
mips_30_04
mips_40_04
mips_40_16
mips_40_19
mips_67_15
at_At3g58560 - mips_01_01_04 "unknown protein"
mips_01_05
mips_01_05_04
mips_02_16
mips_04_05_99
at_At3g60030 - no entry null
at_At4g29740 - mips_02 "cytokinin oxidase - like protein"
mips_01_05_01
mips_01_07
mips_01_07_01
mips_01_20
mips_01_20_99
mips_02_16
mips_02_16_03
mips_02_99
mips_20
mips_20_20
mips_20_20_18
mips_30_04
mips_40_04
mips_40_16
mips_67_15
at_At5g23130 - mips_30_01 "unknown protein"
at_At5g42870 - mips_02_13 "putative protein"
at_At5g45650 - no entry null
at_At5g54860 - no entry null
------------------
Rule 1516
ipr_Serine/Threonine_protein_kinase(_orf_0,_ipr_1),scanregexp(_orf_0,_scanregexp_id_2,_ipr_1),hmmsmart(_orf_0,_hmmsmart_id_3,_ipr_1) = 1
fprintscan(_orf_0,_fprintscan_id_1,_ipr_2),seg(_orf_0),coil(_orf_0) = 0
ss(_1,_3,b,_2),c_len(_2,3.0-6.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),b_len(_4,3.0-6.0) = 1
ss(_1,_3,b,_2),c_len(_2,1.0-3.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3),beta_dist(_1,19.41-29.93) = 0
ss(_1,_3,a,_2),a_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,3.0-6.0) = 0
eval(_1,_2,4.0e-3-0.1),classification(_2,enterobacteriales),db_ref(_2,smart) = 0
eval(_1,_2,2.0e-5-4.0e-3),classification(_2,schizosaccharomyces),desc(_2,probable) = 0
seq_wy6_ratio <= 0.194
seq_av7_ratio <= 0.657
seq_yr9_ratio <= 0.329
seq_cn10_ratio <= 0.315
-> class mips_03_03_01_01 "mitotic cell cycle"
Evaluation on training data (2913 items):
at_At1g30640 mips_01_04 "putative protein kinase"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
at_At1g33770 mips_03_03_01_01 "protein kinase, putative"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g51170 mips_03_01_03 "putative serine/threonine protein kinase"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g53050 mips_01_04 "cell division-related protein, putative"
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
at_At1g66750 mips_01_04 "hypothetical protein"
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_04_09
mips_06_07
mips_06_07_03
mips_25_05_25
mips_30_04
mips_40_02
mips_40_04
mips_40_04_03
at_At1g67580 mips_03_01_03 "putative protein kinase"
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g73450 mips_03_03_01_01 ""
mips_03_03_04
mips_03_03_04_07
at_At1g76540 mips_03_03_01_01 "putative cell division control protein cdc2"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g77720 mips_03_01_03 "putative protein kinase"
mips_03_03_01_01_05
mips_06_07_03
at_At2g20470 mips_03_03_01 "putative protein kinase"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_06
mips_10
mips_40_10
at_At2g40120 mips_03_03_01_01 "protein kinase like protein"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At3g25250 mips_03_03_01 "protein kinase, putative"
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At3g44200 mips_03_03_01_01 "protein kinase-like protein"
mips_03_03_04
mips_03_03_04_07
mips_40_04_05
at_At4g13020 mips_03_01_03 "serine/threonine-specific protein kinase MHK"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At4g14350 mips_03_03_01_01 "protein kinase"
mips_03_03_04
mips_03_03_04_07
mips_14_01_03
mips_25_05_09
mips_25_05_10
at_At4g22940 mips_01_04 "putative cdc2 kinase homolog"
mips_03_01_03
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At4g33080 mips_01_04 "putative protein kinase"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_14_10
mips_14_10_02
at_At5g22840 mips_01_04 "serine protein kinase-like protein"
mips_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
mips_10_01
mips_10_01_01
mips_40_03
mips_63_19
at_At5g45430 mips_03_03_01_01_09 "serine/threonine-protein kinase Mak (male germ cell-associated kinase)-like protein"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
mips_14_04_03
mips_14_04_03_01
mips_30_04_05
at_At5g55910 mips_03_01 "serine/threonine-specific protein kinase ATPK64 (pir||S20918)"
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
at_At5g58380 mips_03_01_05 "SOS2-like protein kinase PKS2"
mips_03_01_05_03
mips_03_03_01_01
mips_03_03_02
mips_25_05_25
mips_40_10_03
at_At5g62310 mips_01_04 "IRE (root hair elongation)"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_14_01
mips_14_01_03
mips_25_03
Training Accuracy: 22/22 (100.00%)
Training Frequency class 'mips_03_03_01_01': 140/2913 (4.81%)
Evaluation on validation data (1468 items):
at_At1g03920 mips_03_03_01_01 "putative protein kinase"
mips_03_03_04
mips_03_03_04_07
at_At1g18670 mips_01_04 "hypothetical protein"
mips_03_01_03
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_25_05_23
at_At1g54610 mips_03_03_01_01_09 "Unknown protein (T22H22.5)"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g68830 - mips_01_04 "putative protein kinase"
mips_03
mips_03_03
mips_03_03_01
mips_03_03_01_02
mips_03_03_01_03
mips_06_07
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_01
mips_10_01_05_01_03
mips_11
mips_11_01
mips_13
mips_13_11
mips_40_03
mips_62
mips_62_01
mips_62_01_01
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_05
mips_63_19
at_At3g46930 - mips_06_07_03 "protein kinase 6-like protein"
mips_10_01_05
mips_10_01_05_01
at_At4g10010 mips_01_04 "putative protein kinase"
mips_03_01_03
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
mips_13_05
mips_25_05_23
at_At4g13000 - mips_01_02 "putative protein"
mips_01_02_01
mips_01_02_01_07
mips_01_04
mips_06_07
mips_11_01
mips_13_11
mips_14_10
mips_14_10_02
at_At4g26070 - mips_01_02_01 "MEK1"
mips_01_02_01_07
mips_04_09
mips_40_04_03
at_At5g01920 - mips_03_03_03 "putative protein"
mips_06_07_03
mips_10_01_05_05
mips_10_01_05_05_01
mips_25_05_10
mips_25_05_17
at_At5g09890 mips_01_04 "protein kinase"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_10_05
mips_14_01
mips_25_05_09
Validation Accuracy: 5/10 (50.00%)
Validation Frequency class 'mips_03_03_01_01': 69/1468 (4.70%)
Evaluation on propertest data (2441 items):
at_At1g74330 mips_03_03_01_01 "putative protein kinase"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At2g34650 - mips_01_02 "putative protein kinase"
mips_01_02_01
mips_01_02_01_07
mips_01_04
mips_14_10
mips_14_10_02
at_At2g35050 - mips_06_07_03 "putative protein kinase"
mips_10_01_05_01
at_At3g23310 mips_03_03_01_01 "protein kinase like protein"
mips_03_03_04
mips_03_03_04_07
at_At3g48260 - mips_03_03 "protein kinase -like protein"
mips_03_03_01
mips_06_07_03
mips_10_05_01
mips_10_05_01_12
mips_10_05_01_12_05
mips_63_19_03
at_At3g54180 mips_03_03_01_01_09 "protein kinase cdc2 homolog B"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At4g16970 - mips_01_02 "kinase like protein"
mips_01_02_01
mips_01_02_01_07
mips_04_99
at_At4g32660 mips_03_03_01_01 "protein kinase (AME3)"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At5g03730 - mips_06_07_03 "SERINE/THREONINE-PROTEIN KINASE CTR1"
mips_10_01_05_01
at_At5g10270 mips_01_04 "cdc2-like protein kinase"
mips_03_01_03
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
at_At5g39420 mips_01_04 "cyclin-dependent kinase CDC2C (CDC2CAt)"
mips_03_01_03
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
at_At5g44290 mips_03_03_01_01_09 "cyclin-dependent protein kinase-like protein"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At5g57610 mips_03_03_01_01 "putative protein"
mips_03_03_01_01_05
mips_06_07_03
mips_48
at_At5g60550 - mips_01_02 "serine/threonine-protein kinase - like protein"
mips_01_02_01
mips_01_02_01_07
mips_01_04
mips_04_09
mips_14_10
mips_14_10_02
mips_25_05_25
mips_30_04
mips_40_04_03
at_At5g63370 mips_01_04 "protein kinase"
mips_03
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
mips_40_03
mips_63_19
Propertest Accuracy: 9/15 (60.00%)
Propertest Frequency class 'mips_03_03_01_01': 126/2441 (5.16%)
New (unknown) data (1468 items):
at_At1g01540 - no entry null
at_At1g04700 - mips_01_04 "putative Ser/Thr protein kinase"
at_At1g05700 - mips_10_05 "putative light repressible receptor protein kinase"
mips_40_02
at_At1g06840 - no entry null
at_At1g07150 - no entry null
at_At1g09970 - mips_08_13 "leucine-rich repeat receptor-like kinase At1g09970"
at_At1g11340 - no entry null
at_At1g12580 - no entry null
at_At1g12680 - no entry null
at_At1g15530 - mips_10 "hypothetical protein"
mips_10_01_01
mips_98
at_At1g16260 - no entry null
at_At1g16270 - mips_01_04 "putative Ser/Thr protein kinase"
mips_03_03
mips_03_03_01
mips_06_07
mips_10_05
mips_14_10
mips_14_10_02
mips_63_17
mips_63_17_01
at_At1g16440 - mips_14_10 "putative protein kinase"
mips_14_10_02
at_At1g19090 - mips_10 "receptor-like serine/threonine kinase (RKF2)"
mips_10_01_01
at_At1g20650 - mips_10_05 "hypothetical protein"
at_At1g24030 - no entry null
at_At1g24650 - no entry null
at_At1g30570 - no entry null
at_At1g31420 - no entry null
at_At1g33260 - no entry null
at_At1g34300 - mips_10_01 "putative protein"
mips_10_01_01
mips_10_05
mips_11
mips_11_07
mips_11_07_03
mips_67
mips_67_15
at_At1g35670 - no entry null
at_At1g45160 - mips_01_04 "similar to IRE homolog 1 dbj|BAA89784.1"
mips_14_01
mips_14_01_03
mips_14_10
mips_14_10_02
mips_25_03
mips_63_17
mips_63_17_01
at_At1g48220 - no entry null
at_At1g48260 - no entry null
at_At1g49730 - no entry null
at_At1g51810 - no entry null
at_At1g51850 - mips_10_05 "Putative protein kinase"
mips_40_02
at_At1g51890 - no entry null
at_At1g61370 - no entry null
at_At1g61550 - mips_10 ""
at_At1g65800 - no entry null
at_At1g66920 - no entry null
at_At1g67520 - mips_11_07_03 "putative receptor protein kinase"
at_At1g69270 - no entry null
at_At1g70110 - no entry null
at_At1g70130 - mips_10_05 "hypothetical protein"
at_At1g70450 - mips_10_01 "putative protein kinase"
mips_10_01_01
at_At1g71530 - no entry null
at_At1g72540 - no entry null
at_At1g74740 - no entry null
at_At1g76370 - no entry null
at_At1g78530 - no entry null
at_At1g79620 - mips_10 "hypothetical protein"
mips_10_01_01
at_At2g07020 - no entry null
at_At2g14440 - no entry null
at_At2g17220 - no entry null
at_At2g19190 - no entry null
at_At2g20300 - no entry null
at_At2g23200 - no entry null
at_At2g23950 - mips_10_01_01 "putative LRR receptor protein kinase"
at_At2g26290 - no entry null
at_At2g28590 - no entry null
at_At2g31010 - no entry null
at_At2g31500 - no entry null
at_At2g31880 - no entry null
at_At2g32510 - mips_63_19 "putative protein kinase"
at_At2g35620 - no entry null
at_At2g37710 - no entry null
at_At2g38910 - no entry null
at_At2g39180 - no entry null
at_At2g41860 - no entry null
at_At2g43690 - no entry null
at_At2g43700 - no entry null
at_At2g48010 - mips_33_03_13 "protein kinase like protein"
mips_35_03_17
at_At3g08720 - mips_01_04 "putative ribosomal-protein S6 kinase (ATPK19)"
mips_14_10
mips_14_10_02
at_At3g08870 - no entry null
at_At3g10660 - no entry null
at_At3g12690 - mips_14_10 "protein kinase, putative"
mips_14_10_02
at_At3g18750 - mips_01_04 "mitogen activated protein kinase kinase, putative"
mips_13_07
mips_30_04
at_At3g20530 - no entry null
at_At3g20830 - mips_04_09 "unknown protein"
mips_40_04_03
at_At3g20860 - no entry null
at_At3g21630 - no entry null
at_At3g23750 - mips_08_13 "receptor-like kinase, putative"
at_At3g26940 - no entry null
at_At3g27580 - mips_14_10 "serine/threonine-protein kinase, PK7"
mips_14_10_02
mips_63_17_01
at_At3g44610 - mips_01_04 "protein kinase-like protein"
mips_04_09
mips_25_05_25
mips_30_04
mips_40_04_03
at_At3g44850 - mips_01 "putative protein"
mips_01_04
mips_04
mips_04_09
mips_06
mips_06_07
mips_10
mips_10_01
mips_10_01_01
mips_25
mips_25_05
mips_25_05_25
mips_30
mips_30_04
mips_40
mips_40_02
mips_40_04
mips_40_04_03
mips_63
mips_63_19
mips_99
at_At3g45240 - mips_04_09 "putative protein kinase"
mips_40_04_03
at_At3g45330 - no entry null
at_At3g45410 - no entry null
at_At3g45420 - no entry null
at_At3g45430 - mips_10 "receptor like protein kinase"
mips_10_01_01
at_At3g45440 - no entry null
at_At3g46330 - no entry null
at_At3g46420 - no entry null
at_At3g51990 - no entry null
at_At3g53380 - no entry null
at_At3g53590 - mips_10 "receptor protein kinase -like protein"
mips_10_01
mips_10_01_01
mips_10_05
at_At3g53810 - no entry null
at_At3g55550 - no entry null
at_At3g57530 - no entry null
at_At3g58640 - mips_04_09 "unknown protein"
mips_30_04
mips_40_04_03
at_At3g59110 - no entry null
at_At3g59700 - no entry null
at_At3g59730 - no entry null
at_At3g59740 - no entry null
at_At3g59750 - no entry null
at_At3g61960 - mips_01_04 "serine/threonine-protein kinase-like protein"
mips_06_07
mips_20
mips_20_25
mips_20_25_16
at_At4g02410 - no entry null
at_At4g02420 - no entry null
at_At4g04500 - no entry null
at_At4g04570 - no entry null
at_At4g09570 - no entry null
at_At4g10390 - no entry null
at_At4g18700 - no entry null
at_At4g21380 - no entry null
at_At4g21390 - no entry null
at_At4g21940 - no entry null
at_At4g23180 - no entry null
at_At4g23240 - no entry null
at_At4g23270 - no entry null
at_At4g23290 - no entry null
at_At4g24480 - mips_01_04 "putative protein kinase"
mips_03
mips_03_03
mips_03_03_01
mips_06_07
mips_10_01
mips_10_01_01
mips_10_05
mips_14
mips_20
mips_14_10
mips_14_10_02
mips_20_20
mips_20_20_18
mips_63_17
mips_63_17_01
mips_63_19
at_At4g26540 - no entry null
at_At4g27290 - no entry null
at_At4g27300 - no entry null
at_At4g28350 - no entry null
at_At4g29050 - no entry null
at_At4g32000 - no entry null
at_At4g32300 - mips_11_07_03 "S-receptor kinase -like protein"
at_At4g35600 - no entry null
at_At4g38830 - no entry null
at_At5g01540 - no entry null
at_At5g01550 - no entry null
at_At5g02800 - no entry null
at_At5g03140 - no entry null
at_At5g05160 - no entry null
at_At5g10290 - no entry null
at_At5g10530 - no entry null
at_At5g13160 - no entry null
at_At5g15080 - no entry null
at_At5g15730 - no entry null
at_At5g18500 - no entry null
at_At5g18610 - no entry null
at_At5g25110 - mips_01_04 "serine/threonine protein kinase-like protein"
at_At5g25930 - mips_08_13 "receptor-like protein kinase - like"
mips_11_05_01
at_At5g28680 - no entry null
at_At5g35370 - mips_10_05 "receptor-like protein kinase - like protein"
mips_11_07
mips_11_07_03
mips_67_15
at_At5g35960 - mips_10_05 "serine/threonine protein kinase-like"
at_At5g38250 - no entry null
at_At5g39000 - no entry null
at_At5g39030 - no entry null
at_At5g39390 - mips_10 "receptor protein kinase -like protein"
mips_10_01_01
at_At5g42120 - no entry null
at_At5g45810 - mips_14_10 "CBL-interacting protein kinase 19 (CIPK19)"
mips_14_10_02
at_At5g47070 - mips_10_01 "protein serine/threonine kinase-like"
mips_10_01_01
at_At5g49760 - no entry null
at_At5g56460 - mips_10_05 "protein kinase-like protein"
at_At5g56890 - mips_10_01_01 "putative protein"
mips_14_01_03
at_At5g57670 - no entry null
at_At5g59670 - no entry null
at_At5g60280 - no entry null
at_At5g60320 - no entry null
at_At5g63710 - no entry null
at_At5g65240 - mips_10 "receptor-like protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
mips_40
mips_40_02
at_At5g65600 - no entry null
at_At5g66710 - mips_25_05_13 "protein kinase ATN1-like protein"
mips_33_03_13
mips_35_03_17
------------------
Rule 1407
ipr_G-protein_beta_WD-40_repeat(_orf_0,_ipr_1) = 0
profscan(_orf_0,_profscan_id_1,_ipr_2),blastprodom(_orf_0,_blastprodom_id_3,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_2) = 1
ss(_1,_3,a,_2),c_len(_2,1.0-3.0),a_len(_3,9.0-11.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2) = 0
seq_pf4_ratio > 0.266
ss(_1,_3,c,_2),alpha_dist(_1,45.54-101.0),c_len(_3,1.0-3.0) = 0
ss(_1,_3,c,_2),b_len(_2,1.0-3.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3),alpha_dist(_1,13.03-23.6) = 0
-> class mips_03_03_01_01 "mitotic cell cycle"
Evaluation on training data (2913 items):
at_At1g52150 - mips_06_10 "putative protein"
mips_25_03
mips_40_10_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
mips_63_03_01
at_At1g70660 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At2g16740 mips_03 "putative ubiquitin-conjugating enzyme E2"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_05
mips_06_13
mips_14
mips_14_01
mips_30
mips_30_10
mips_40_03
at_At2g16920 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_10
mips_14_10_02
mips_30_10
at_At2g33770 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme E2"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_10
mips_14_10_02
mips_30_10
at_At3g08690 mips_03_03_01_01 "putative ubiquitin conjugating enzyme"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At3g13550 mips_03_03_01_01 "ubiquitin-conjugating enzyme COP10 (COP10)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At3g20060 mips_03_03_01_01 "ubiquitin-conjugating enzyme, putative"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g05080 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At5g42990 mips_03_03_01_01 "ubiquitin-conjugating enzyme-like protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At5g53300 mips_03_03_01_01 "ubiquitin-conjugating enzyme E2-17 kD 10 (ubiquitin-protein ligase 10) (ubiquitin carrier protein 10) (sp|P35133)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g56150 mips_03_03_01_01 "ubiquitin-conjugating enzyme-like protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
Training Accuracy: 11/12 (91.67%)
Training Frequency class 'mips_03_03_01_01': 140/2913 (4.81%)
Evaluation on validation data (1468 items):
at_At1g10470 - mips_10_01_05_07 "putative response regulator 3"
mips_10_01_99
mips_10_05_01
mips_10_05_01_10
at_At1g45050 mips_03_03_01_01 "similar to ubiquitin-conjugating enzyme 15 gb|AAC39324.1; similar to ESTs emb|Z47633.1, gb|L47909.1, gb|T42291.1"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At1g64230 mips_03_03 "ubiquitin-conjugating enzyme, putative"
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_05
mips_06_13
mips_14_01
mips_30_10
at_At2g32790 mips_03_03 "putative ubiquitin-conjugating enzyme E2"
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_05
mips_06_13
mips_14_01
mips_30_10
at_At2g46030 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme E2"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_04_03
mips_14_04_03_03
mips_30_10
Validation Accuracy: 4/5 (80.00%)
Validation Frequency class 'mips_03_03_01_01': 69/1468 (4.70%)
Evaluation on propertest data (2441 items):
at_At1g16890 mips_03 "unknown protein"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06
mips_06_07
mips_06_07_05
mips_06_13
mips_14
mips_14_01
mips_30
mips_30_10
mips_40_03
at_At1g36340 mips_03 "putative ubiquitin conjugating enzyme"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06
mips_06_07
mips_06_07_05
mips_06_13
mips_14
mips_14_01
mips_30
mips_30_10
mips_40
mips_40_03
at_At1g50490 mips_03_03_01_01 "cyclin-specific ubiquitin carrier protein, putative"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At1g78870 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At2g36060 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At3g17000 - mips_03_03_04 "ubiquitin conjugating enzyme, putative"
mips_03_03_04_07
mips_06_07_05
at_At3g52560 - mips_06_07_05 "putative DNA-binding protein"
mips_06_13_01
mips_08_13
mips_14_04_03_03
mips_14_04_03_05
at_At3g57870 mips_03_03_01_01 "E2 ubiquitin-conjugating-like enzyme Ahus5"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At4g27960 mips_03_03_01_01 "ubiquitin-protein ligase UBC9"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g25760 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At5g41700 mips_03_03_01_01 "ubiquitin-conjugating enzyme E2-17 kD 8 (ubiquitin-protein ligase 8) (ubiquitin carrier protein 8) (sp|P35131)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g62540 mips_03_03_01_01 "ubiquitin-conjugating enzyme E2-17 kd 3 (ubiquitin-protein ligase 3) (ubiquitin carrier protein 3)-like protein (sp|P42746)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
Propertest Accuracy: 10/12 (83.33%)
Propertest Frequency class 'mips_03_03_01_01': 126/2441 (5.16%)
New (unknown) data (1468 items):
at_At1g05230 - mips_13_11 "homeobox like protein"
mips_14_10
mips_14_10_02
mips_25_03
mips_25_05_10
at_At1g17920 - no entry null
at_At1g53020 - no entry null
at_At1g61950 - mips_10 "hypothetical protein"
mips_10_01_01
at_At1g73360 - mips_14_10 ""
mips_14_10_02
mips_25_05_10
at_At1g79840 - no entry null
at_At2g22430 - mips_13_11 "homeodomain transcription factor (ATHB-6)"
mips_14_10
mips_14_10_02
mips_25_05_10
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At2g32370 - no entry null
at_At2g36610 - mips_13_11_01 "putative homeodomain transcription factor"
mips_25_05_10
mips_25_05_11
mips_25_05_17
mips_37
mips_37_03
mips_37_03_02
mips_37_03_17
mips_63_03_01
at_At2g46090 - no entry null
at_At2g46680 - mips_25_05_13 "homeodomain transcription factor (ATHB-7)"
mips_25_05_15
at_At3g11260 - mips_25_05_10 "hypothetical protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At4g02060 - mips_40_10_03 "PROLIFERA"
at_At4g32040 - no entry null
at_At4g32880 - mips_25_05_10 "HD-zip transcription factor (athb-8)"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At4g36410 - mips_06_07_05 "ubiquitin-conjugating enzyme"
mips_08_05
at_At4g39020 - mips_13_03 "putative protein"
mips_13_03_01
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35_03_17
mips_63_17_01
at_At5g17320 - mips_14_10 "homeobox protein"
mips_14_10_02
mips_25_05_10
at_At5g60690 - no entry null
------------------
Rule 1518
ipr_Serine/Threonine_protein_kinase(_orf_0,_ipr_1),scanregexp(_orf_0,_scanregexp_id_2,_ipr_1),hmmsmart(_orf_0,_hmmsmart_id_3,_ipr_1) = 1
fprintscan(_orf_0,_fprintscan_id_1,_ipr_2),seg(_orf_0),coil(_orf_0) = 0
ss(_1,_3,c,_2),a_len(_2,1.0-3.0) = 1
ss(_1,_3,b,_2),c_len(_2,3.0-6.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),b_len(_4,3.0-6.0) = 1
ss(_1,_3,b,_2),c_len(_2,1.0-3.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3),beta_dist(_1,19.41-29.93) = 0
ss(_1,_3,a,_2),a_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,3.0-6.0) = 0
eval(_1,_2,4.0e-3-0.1),classification(_2,enterobacteriales),db_ref(_2,smart) = 0
eval(_1,_2,2.0e-5-4.0e-3),classification(_2,schizosaccharomyces),desc(_2,probable) = 0
seq_wy6_ratio <= 0.194
seq_av7_ratio <= 0.657
seq_yr9_ratio <= 0.329
seq_cn10_ratio <= 0.315
-> class mips_03_03_04_07 "nuclear division"
Evaluation on training data (2913 items):
at_At1g30640 mips_01_04 "putative protein kinase"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
at_At1g33770 mips_03_03_01_01 "protein kinase, putative"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g51170 mips_03_01_03 "putative serine/threonine protein kinase"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g53050 mips_01_04 "cell division-related protein, putative"
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
at_At1g66750 mips_01_04 "hypothetical protein"
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_04_09
mips_06_07
mips_06_07_03
mips_25_05_25
mips_30_04
mips_40_02
mips_40_04
mips_40_04_03
at_At1g67580 mips_03_01_03 "putative protein kinase"
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g73450 mips_03_03_01_01 ""
mips_03_03_04
mips_03_03_04_07
at_At1g76540 mips_03_03_01_01 "putative cell division control protein cdc2"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g77720 - mips_03_01_03 "putative protein kinase"
mips_03_03_01_01_05
mips_06_07_03
at_At2g20470 mips_03_03_01 "putative protein kinase"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_06
mips_10
mips_40_10
at_At2g40120 mips_03_03_01_01 "protein kinase like protein"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At3g25250 mips_03_03_01 "protein kinase, putative"
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At3g44200 mips_03_03_01_01 "protein kinase-like protein"
mips_03_03_04
mips_03_03_04_07
mips_40_04_05
at_At4g13020 mips_03_01_03 "serine/threonine-specific protein kinase MHK"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At4g14350 mips_03_03_01_01 "protein kinase"
mips_03_03_04
mips_03_03_04_07
mips_14_01_03
mips_25_05_09
mips_25_05_10
at_At4g22940 mips_01_04 "putative cdc2 kinase homolog"
mips_03_01_03
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At4g33080 mips_01_04 "putative protein kinase"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_14_10
mips_14_10_02
at_At5g22840 mips_01_04 "serine protein kinase-like protein"
mips_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
mips_10_01
mips_10_01_01
mips_40_03
mips_63_19
at_At5g45430 mips_03_03_01_01_09 "serine/threonine-protein kinase Mak (male germ cell-associated kinase)-like protein"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
mips_14_04_03
mips_14_04_03_01
mips_30_04_05
at_At5g55910 mips_03_01 "serine/threonine-specific protein kinase ATPK64 (pir||S20918)"
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
at_At5g62310 mips_01_04 "IRE (root hair elongation)"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_14_01
mips_14_01_03
mips_25_03
Training Accuracy: 20/21 (95.24%)
Training Frequency class 'mips_03_03_04_07': 85/2913 (2.92%)
Evaluation on validation data (1468 items):
at_At1g03920 mips_03_03_01_01 "putative protein kinase"
mips_03_03_04
mips_03_03_04_07
at_At1g18670 mips_01_04 "hypothetical protein"
mips_03_01_03
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_25_05_23
at_At1g54610 mips_03_03_01_01_09 "Unknown protein (T22H22.5)"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At1g68830 - mips_01_04 "putative protein kinase"
mips_03
mips_03_03
mips_03_03_01
mips_03_03_01_02
mips_03_03_01_03
mips_06_07
mips_10_01
mips_10_01_01
mips_10_01_05
mips_10_01_05_01
mips_10_01_05_01_03
mips_11
mips_11_01
mips_13
mips_13_11
mips_40_03
mips_62
mips_62_01
mips_62_01_01
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_05
mips_63_19
at_At3g46930 - mips_06_07_03 "protein kinase 6-like protein"
mips_10_01_05
mips_10_01_05_01
at_At4g10010 mips_01_04 "putative protein kinase"
mips_03_01_03
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
mips_13_05
mips_25_05_23
at_At5g01920 - mips_03_03_03 "putative protein"
mips_06_07_03
mips_10_01_05_05
mips_10_01_05_05_01
mips_25_05_10
mips_25_05_17
at_At5g09890 mips_01_04 "protein kinase"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_10_05
mips_14_01
mips_25_05_09
Validation Accuracy: 5/8 (62.50%)
Validation Frequency class 'mips_03_03_04_07': 52/1468 (3.54%)
Evaluation on propertest data (2441 items):
at_At1g74330 mips_03_03_01_01 "putative protein kinase"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At2g34650 - mips_01_02 "putative protein kinase"
mips_01_02_01
mips_01_02_01_07
mips_01_04
mips_14_10
mips_14_10_02
at_At2g35050 - mips_06_07_03 "putative protein kinase"
mips_10_01_05_01
at_At3g23310 mips_03_03_01_01 "protein kinase like protein"
mips_03_03_04
mips_03_03_04_07
at_At3g48260 - mips_03_03 "protein kinase -like protein"
mips_03_03_01
mips_06_07_03
mips_10_05_01
mips_10_05_01_12
mips_10_05_01_12_05
mips_63_19_03
at_At3g54180 mips_03_03_01_01_09 "protein kinase cdc2 homolog B"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At4g16970 - mips_01_02 "kinase like protein"
mips_01_02_01
mips_01_02_01_07
mips_04_99
at_At4g32660 mips_03_03_01_01 "protein kinase (AME3)"
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At5g03730 - mips_06_07_03 "SERINE/THREONINE-PROTEIN KINASE CTR1"
mips_10_01_05_01
at_At5g10270 mips_01_04 "cdc2-like protein kinase"
mips_03_01_03
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
at_At5g39420 mips_01_04 "cyclin-dependent kinase CDC2C (CDC2CAt)"
mips_03_01_03
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
at_At5g44290 mips_03_03_01_01_09 "cyclin-dependent protein kinase-like protein"
mips_03_03_04
mips_03_03_04_07
mips_06_07_03
at_At5g57610 - mips_03_03_01_01 "putative protein"
mips_03_03_01_01_05
mips_06_07_03
mips_48
at_At5g60550 - mips_01_02 "serine/threonine-protein kinase - like protein"
mips_01_02_01
mips_01_02_01_07
mips_01_04
mips_04_09
mips_14_10
mips_14_10_02
mips_25_05_25
mips_30_04
mips_40_04_03
at_At5g63370 mips_01_04 "protein kinase"
mips_03
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_01_09
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_03
mips_40_03
mips_63_19
Propertest Accuracy: 8/15 (53.33%)
Propertest Frequency class 'mips_03_03_04_07': 88/2441 (3.61%)
New (unknown) data (1468 items):
at_At1g01540 - no entry null
at_At1g04700 - mips_01_04 "putative Ser/Thr protein kinase"
at_At1g05700 - mips_10_05 "putative light repressible receptor protein kinase"
mips_40_02
at_At1g06840 - no entry null
at_At1g07150 - no entry null
at_At1g09970 - mips_08_13 "leucine-rich repeat receptor-like kinase At1g09970"
at_At1g12580 - no entry null
at_At1g12680 - no entry null
at_At1g16260 - no entry null
at_At1g16270 - mips_01_04 "putative Ser/Thr protein kinase"
mips_03_03
mips_03_03_01
mips_06_07
mips_10_05
mips_14_10
mips_14_10_02
mips_63_17
mips_63_17_01
at_At1g16440 - mips_14_10 "putative protein kinase"
mips_14_10_02
at_At1g19090 - mips_10 "receptor-like serine/threonine kinase (RKF2)"
mips_10_01_01
at_At1g24650 - no entry null
at_At1g30570 - no entry null
at_At1g31420 - no entry null
at_At1g33260 - no entry null
at_At1g34300 - mips_10_01 "putative protein"
mips_10_01_01
mips_10_05
mips_11
mips_11_07
mips_11_07_03
mips_67
mips_67_15
at_At1g35670 - no entry null
at_At1g45160 - mips_01_04 "similar to IRE homolog 1 dbj|BAA89784.1"
mips_14_01
mips_14_01_03
mips_14_10
mips_14_10_02
mips_25_03
mips_63_17
mips_63_17_01
at_At1g48260 - no entry null
at_At1g49730 - no entry null
at_At1g51810 - no entry null
at_At1g51850 - mips_10_05 "Putative protein kinase"
mips_40_02
at_At1g51890 - no entry null
at_At1g61550 - mips_10 ""
at_At1g70110 - no entry null
at_At1g70450 - mips_10_01 "putative protein kinase"
mips_10_01_01
at_At1g71530 - no entry null
at_At1g72540 - no entry null
at_At1g74740 - no entry null
at_At1g79620 - mips_10 "hypothetical protein"
mips_10_01_01
at_At2g07020 - no entry null
at_At2g14440 - no entry null
at_At2g17220 - no entry null
at_At2g19190 - no entry null
at_At2g20300 - no entry null
at_At2g23200 - no entry null
at_At2g23950 - mips_10_01_01 "putative LRR receptor protein kinase"
at_At2g26290 - no entry null
at_At2g31500 - no entry null
at_At2g31880 - no entry null
at_At2g41860 - no entry null
at_At2g48010 - mips_33_03_13 "protein kinase like protein"
mips_35_03_17
at_At3g08720 - mips_01_04 "putative ribosomal-protein S6 kinase (ATPK19)"
mips_14_10
mips_14_10_02
at_At3g08870 - no entry null
at_At3g10660 - no entry null
at_At3g12690 - mips_14_10 "protein kinase, putative"
mips_14_10_02
at_At3g18750 - mips_01_04 "mitogen activated protein kinase kinase, putative"
mips_13_07
mips_30_04
at_At3g20530 - no entry null
at_At3g20830 - mips_04_09 "unknown protein"
mips_40_04_03
at_At3g20860 - no entry null
at_At3g21630 - no entry null
at_At3g23750 - mips_08_13 "receptor-like kinase, putative"
at_At3g26940 - no entry null
at_At3g27580 - mips_14_10 "serine/threonine-protein kinase, PK7"
mips_14_10_02
mips_63_17_01
at_At3g44610 - mips_01_04 "protein kinase-like protein"
mips_04_09
mips_25_05_25
mips_30_04
mips_40_04_03
at_At3g44850 - mips_01 "putative protein"
mips_01_04
mips_04
mips_04_09
mips_06
mips_06_07
mips_10
mips_10_01
mips_10_01_01
mips_25
mips_25_05
mips_25_05_25
mips_30
mips_30_04
mips_40
mips_40_02
mips_40_04
mips_40_04_03
mips_63
mips_63_19
mips_99
at_At3g45410 - no entry null
at_At3g45420 - no entry null
at_At3g45440 - no entry null
at_At3g46330 - no entry null
at_At3g46420 - no entry null
at_At3g53380 - no entry null
at_At3g53590 - mips_10 "receptor protein kinase -like protein"
mips_10_01
mips_10_01_01
mips_10_05
at_At3g57530 - no entry null
at_At3g58640 - mips_04_09 "unknown protein"
mips_30_04
mips_40_04_03
at_At3g59110 - no entry null
at_At3g59750 - no entry null
at_At3g61960 - mips_01_04 "serine/threonine-protein kinase-like protein"
mips_06_07
mips_20
mips_20_25
mips_20_25_16
at_At4g02410 - no entry null
at_At4g04570 - no entry null
at_At4g09570 - no entry null
at_At4g10390 - no entry null
at_At4g18700 - no entry null
at_At4g21380 - no entry null
at_At4g21940 - no entry null
at_At4g23180 - no entry null
at_At4g23270 - no entry null
at_At4g23290 - no entry null
at_At4g24480 - mips_01_04 "putative protein kinase"
mips_03
mips_03_03
mips_03_03_01
mips_06_07
mips_10_01
mips_10_01_01
mips_10_05
mips_14
mips_20
mips_14_10
mips_14_10_02
mips_20_20
mips_20_20_18
mips_63_17
mips_63_17_01
mips_63_19
at_At4g26540 - no entry null
at_At4g27300 - no entry null
at_At4g32000 - no entry null
at_At4g32300 - mips_11_07_03 "S-receptor kinase -like protein"
at_At4g38830 - no entry null
at_At5g01540 - no entry null
at_At5g01550 - no entry null
at_At5g03140 - no entry null
at_At5g05160 - no entry null
at_At5g10290 - no entry null
at_At5g15080 - no entry null
at_At5g15730 - no entry null
at_At5g18610 - no entry null
at_At5g25110 - mips_01_04 "serine/threonine protein kinase-like protein"
at_At5g25930 - mips_08_13 "receptor-like protein kinase - like"
mips_11_05_01
at_At5g28680 - no entry null
at_At5g35370 - mips_10_05 "receptor-like protein kinase - like protein"
mips_11_07
mips_11_07_03
mips_67_15
at_At5g35960 - mips_10_05 "serine/threonine protein kinase-like"
at_At5g39000 - no entry null
at_At5g39030 - no entry null
at_At5g39390 - mips_10 "receptor protein kinase -like protein"
mips_10_01_01
at_At5g42120 - no entry null
at_At5g45810 - mips_14_10 "CBL-interacting protein kinase 19 (CIPK19)"
mips_14_10_02
at_At5g47070 - mips_10_01 "protein serine/threonine kinase-like"
mips_10_01_01
at_At5g49760 - no entry null
at_At5g56460 - mips_10_05 "protein kinase-like protein"
at_At5g56890 - mips_10_01_01 "putative protein"
mips_14_01_03
at_At5g57670 - no entry null
at_At5g60280 - no entry null
at_At5g60320 - no entry null
at_At5g63710 - no entry null
at_At5g65240 - mips_10 "receptor-like protein kinase"
mips_10_01
mips_10_01_01
mips_10_05
mips_40
mips_40_02
------------------
Rule 1408
ipr_G-protein_beta_WD-40_repeat(_orf_0,_ipr_1) = 0
profscan(_orf_0,_profscan_id_1,_ipr_2),blastprodom(_orf_0,_blastprodom_id_3,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_2) = 1
ss(_1,_3,c,_2),alpha_dist(_1,45.54-101.0),c_len(_3,1.0-3.0) = 0
ss(_1,_3,c,_2),b_len(_2,1.0-3.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3),alpha_dist(_1,13.03-23.6) = 0
seq_pf4_ratio > 0.266
ss(_1,_3,a,_2),c_len(_2,1.0-3.0),a_len(_3,9.0-11.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2) = 0
-> class mips_03_03_04_07 "nuclear division"
Evaluation on training data (2913 items):
at_At1g52150 - mips_06_10 "putative protein"
mips_25_03
mips_40_10_03
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_07
mips_63_03_01
at_At1g70660 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At2g16740 mips_03 "putative ubiquitin-conjugating enzyme E2"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_05
mips_06_13
mips_14
mips_14_01
mips_30
mips_30_10
mips_40_03
at_At2g16920 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_10
mips_14_10_02
mips_30_10
at_At2g33770 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme E2"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_10
mips_14_10_02
mips_30_10
at_At3g08690 mips_03_03_01_01 "putative ubiquitin conjugating enzyme"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At3g13550 mips_03_03_01_01 "ubiquitin-conjugating enzyme COP10 (COP10)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At3g20060 mips_03_03_01_01 "ubiquitin-conjugating enzyme, putative"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g05080 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At5g42990 mips_03_03_01_01 "ubiquitin-conjugating enzyme-like protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At5g53300 mips_03_03_01_01 "ubiquitin-conjugating enzyme E2-17 kD 10 (ubiquitin-protein ligase 10) (ubiquitin carrier protein 10) (sp|P35133)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g56150 mips_03_03_01_01 "ubiquitin-conjugating enzyme-like protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
Training Accuracy: 11/12 (91.67%)
Training Frequency class 'mips_03_03_04_07': 85/2913 (2.92%)
Evaluation on validation data (1468 items):
at_At1g10470 - mips_10_01_05_07 "putative response regulator 3"
mips_10_01_99
mips_10_05_01
mips_10_05_01_10
at_At1g45050 mips_03_03_01_01 "similar to ubiquitin-conjugating enzyme 15 gb|AAC39324.1; similar to ESTs emb|Z47633.1, gb|L47909.1, gb|T42291.1"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At1g64230 mips_03_03 "ubiquitin-conjugating enzyme, putative"
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_05
mips_06_13
mips_14_01
mips_30_10
at_At2g32790 mips_03_03 "putative ubiquitin-conjugating enzyme E2"
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07
mips_06_07_05
mips_06_13
mips_14_01
mips_30_10
at_At2g46030 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme E2"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_04_03
mips_14_04_03_03
mips_30_10
Validation Accuracy: 4/5 (80.00%)
Validation Frequency class 'mips_03_03_04_07': 52/1468 (3.54%)
Evaluation on propertest data (2441 items):
at_At1g16890 mips_03 "unknown protein"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06
mips_06_07
mips_06_07_05
mips_06_13
mips_14
mips_14_01
mips_30
mips_30_10
mips_40_03
at_At1g36340 mips_03 "putative ubiquitin conjugating enzyme"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06
mips_06_07
mips_06_07_05
mips_06_13
mips_14
mips_14_01
mips_30
mips_30_10
mips_40
mips_40_03
at_At1g50490 mips_03_03_01_01 "cyclin-specific ubiquitin carrier protein, putative"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At1g78870 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At2g36060 mips_03_03_01_01 "putative ubiquitin-conjugating enzyme"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At3g17000 mips_03_03_04 "ubiquitin conjugating enzyme, putative"
mips_03_03_04_07
mips_06_07_05
at_At3g52560 - mips_06_07_05 "putative DNA-binding protein"
mips_06_13_01
mips_08_13
mips_14_04_03_03
mips_14_04_03_05
at_At3g57870 mips_03_03_01_01 "E2 ubiquitin-conjugating-like enzyme Ahus5"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At4g27960 mips_03_03_01_01 "ubiquitin-protein ligase UBC9"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g25760 mips_03_03_01_01 "unknown protein"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
at_At5g41700 mips_03_03_01_01 "ubiquitin-conjugating enzyme E2-17 kD 8 (ubiquitin-protein ligase 8) (ubiquitin carrier protein 8) (sp|P35131)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_14_01
mips_30_10
at_At5g62540 mips_03_03_01_01 "ubiquitin-conjugating enzyme E2-17 kd 3 (ubiquitin-protein ligase 3) (ubiquitin carrier protein 3)-like protein (sp|P42746)"
mips_03_03_02
mips_03_03_04
mips_03_03_04_07
mips_06_07_05
mips_30_10
Propertest Accuracy: 11/12 (91.67%)
Propertest Frequency class 'mips_03_03_04_07': 88/2441 (3.61%)
New (unknown) data (1468 items):
at_At1g05230 - mips_13_11 "homeobox like protein"
mips_14_10
mips_14_10_02
mips_25_03
mips_25_05_10
at_At1g17920 - no entry null
at_At1g53020 - no entry null
at_At1g61950 - mips_10 "hypothetical protein"
mips_10_01_01
at_At1g73360 - mips_14_10 ""
mips_14_10_02
mips_25_05_10
at_At1g79840 - no entry null
at_At2g22430 - mips_13_11 "homeodomain transcription factor (ATHB-6)"
mips_14_10
mips_14_10_02
mips_25_05_10
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At2g32370 - no entry null
at_At2g36610 - mips_13_11_01 "putative homeodomain transcription factor"
mips_25_05_10
mips_25_05_11
mips_25_05_17
mips_37
mips_37_03
mips_37_03_02
mips_37_03_17
mips_63_03_01
at_At2g46090 - no entry null
at_At2g46680 - mips_25_05_13 "homeodomain transcription factor (ATHB-7)"
mips_25_05_15
at_At3g11260 - mips_25_05_10 "hypothetical protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At4g02060 - mips_40_10_03 "PROLIFERA"
at_At4g32040 - no entry null
at_At4g32880 - mips_25_05_10 "HD-zip transcription factor (athb-8)"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At4g36410 - mips_06_07_05 "ubiquitin-conjugating enzyme"
mips_08_05
at_At4g39020 - mips_13_03 "putative protein"
mips_13_03_01
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35_03_17
mips_63_17_01
at_At5g17320 - mips_14_10 "homeobox protein"
mips_14_10_02
mips_25_05_10
at_At5g60690 - no entry null
------------------
Rule 1427
scanregexp_atp_gtp_a(_orf_0,_scanregexp_id_1),profscan(_orf_0,_profscan_id_2,_ipr_3),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_3) = 1
ipr_RNA-binding_region_RNP-1___RNA_recognition_motif_(_orf_0,_ipr_1) = 0
profscan(_orf_0,_profscan_id_1,_ipr_2),fprintscan(_orf_0,_fprintscan_id_3,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_4,_ipr_2) = 0
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_3,_ipr_2),fprintscan(_orf_0,_fprintscan_id_4,_ipr_2) = 0
ss(_1,_3,b,_2),b_len(_3,1.0-3.0),a_len(_2,1.0-3.0),ss(_1,_5,a,_4),notequal(_5,_2),notequal(_5,_3),notequal(_4,_2),notequal(_4,_3) = 0
seq_mg2_ratio <= 0.286
seq_va10_ratio <= 0.763
ss(_1,_3,a,_2),a_len(_3,3.0-6.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),a_len(_4,9.0-11.0) = 1
-> class mips_04_05_05_01 "splicing"
Evaluation on training data (2913 items):
at_At1g16280 - mips_04_05_05 "putative ATP-dependent RNA helicase"
mips_04_05_05_11
mips_05_04
mips_05_04_01
mips_14_01
mips_33
mips_33_03
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At1g27900 mips_04_05_05 "ATP-dependent RNA helicase (At1g27900)"
mips_04_05_05_01
at_At1g58050 mips_04_05_05_01 "hypothetical protein"
mips_04_05_05_01_10
mips_04_05_05_11
at_At1g71280 mips_04_01 "putative DEAD/DEAH box helicase"
mips_04_01_04
mips_04_05_05_01
at_At1g72730 mips_04 "Eukaryotic initiation factor 4A like protein"
mips_04_05_05
mips_04_05_05_01
mips_14_04
mips_25_05
mips_25_05_10
mips_40_10
mips_63_19
mips_63_19_03
at_At2g35920 mips_04 "ATP-dependent RNA helicase A like protein"
mips_04_05
mips_04_05_01
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06
mips_06_10
mips_14
mips_14_04
mips_25
mips_25_05
mips_40
mips_40_10
mips_63
mips_63_01
mips_63_03
mips_63_03_03
mips_63_19
mips_63_19_03
at_At2g42520 mips_04_05_05 "putative ATP-dependent RNA helicase"
mips_04_05_05_01
mips_04_05_05_11
mips_05_04_01
mips_33_03_02
at_At2g45810 mips_04_05_05_01 "putative ATP-dependent RNA helicase"
mips_04_99
at_At3g13920 mips_04_05_05 "eukaryotic protein synthesis initiation factor 4A"
mips_04_05_05_01
mips_05
mips_05_04
mips_25_05_10
at_At3g26560 mips_04_05_05 "ATP-dependent RNA helicase, putative"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06_10
mips_40_10_99
at_At3g58570 mips_04_01 "ATP-dependent RNA helicase-like protein"
mips_04_01_04
mips_04_05_05_01
mips_33
mips_33_03
mips_33_03_02
at_At3g62310 mips_04_05_05 "ATP-dependent RNA helicase-like protein"
mips_04_05_05_01
at_At4g01020 mips_03 "putative protein"
mips_03_03
mips_03_03_01
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_99
mips_05
mips_05_07
mips_30
mips_30_10
mips_40_10_99
mips_63_03
mips_63_19
at_At4g16680 mips_04_05_05 "RNA helicase"
mips_04_05_05_01
mips_05_07
mips_30_10
at_At5g08610 mips_03_01_09 "RNA helicase-like protein"
mips_03_01_09_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05_04
mips_05_04_01
mips_25_05_10
mips_40_07
mips_40_10_07
mips_40_10_99
mips_63_03_03
at_At5g11170 mips_04 "DEAD BOX RNA helicase RH15 - like protein"
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_99
mips_05
mips_05_01
mips_05_01_01
mips_05_01_99
mips_05_04
mips_05_04_01
mips_40
mips_40_10
mips_63
mips_63_03
mips_63_03_03
mips_63_19
mips_63_19_03
mips_98
at_At5g11200 mips_04_05_05_01 "DEAD BOX RNA helicase RH15"
mips_04_05_05_01_99
mips_05_01
mips_05_01_01
mips_05_01_99
mips_05_04_01
mips_63_03_03
mips_63_19_03
at_At5g39840 mips_01_03_16 "putative RNA helicase"
mips_02_13
mips_02_13_03
mips_02_13_05
mips_04_01
mips_04_01_04
mips_04_05_05_01
mips_04_99
mips_05_07
mips_63_03_03
at_At5g63630 - mips_04_01 "RNA helicase"
mips_04_01_04
mips_04_05_05_11
mips_05_04_01
mips_33_03_02
mips_63_19_03
Training Accuracy: 17/19 (89.47%)
Training Frequency class 'mips_04_05_05_01': 98/2913 (3.36%)
Evaluation on validation data (1468 items):
at_At1g31970 - mips_04_05_05_11 "putative protein"
mips_05_04_01
mips_33
mips_33_03
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At1g71370 mips_03 "putative ATP-dependent RNA helicase"
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_04_01
mips_04_01_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05
mips_05_04
mips_05_04_01
mips_40_07
mips_40_10_07
mips_40_10_99
mips_40_16
mips_63_03
mips_63_03_03
mips_63_19
at_At1g77050 mips_04 ""
mips_04_01
mips_04_01_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_05
mips_05_04
mips_40_03
mips_40_10
mips_63
mips_63_03
mips_63_19
at_At2g47250 mips_04_05_05 "putative pre-mRNA splicing factor RNA helicase"
mips_04_05_05_01
mips_05_04
mips_40_10_99
at_At2g47680 mips_04_05_05 "putative ATP-dependent RNA helicase A"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06_10
mips_40_10_99
mips_63_03_03
at_At3g06980 mips_04_05_05_01 "putative DEAD/DEAH box helicase"
mips_05_04_01
mips_33_03_02
at_At3g09720 mips_04_05_05_01 "putative RNA helicase"
mips_63_03_03
mips_63_19_03
at_At3g16840 mips_04_05_05 "ATP-dependent RNA helicase"
mips_04_05_05_01
mips_33_03_02
at_At5g08620 - mips_04_05_05 "RNA helicase (emb|CAA09212.1)"
mips_04_05_05_11
mips_05
mips_05_04_01
mips_14_01
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At5g13010 mips_04_05_05 "pre-mRNA splicing factor ATP-dependent RNA helicase -like protein"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06_10
mips_63_03_03
mips_63_19_03
at_At5g54910 mips_03_01_09 "RNA helicase-like protein"
mips_03_01_09_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05_04_01
mips_40_10_07
mips_63_03_03
at_At5g61140 mips_04 "RNA helicase - like protein"
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_40_10
mips_40_10_99
mips_63
mips_63_03
mips_63_19
at_At5g65900 mips_03_01 "ATP-dependent RNA helicase-like"
mips_03_01_09
mips_03_01_09_05
mips_04_01
mips_04_01_04
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05
mips_05_04
mips_05_04_01
mips_30_01
mips_40_07
mips_40_10_07
mips_40_10_99
mips_40_16
mips_63_03_03
Validation Accuracy: 11/13 (84.62%)
Validation Frequency class 'mips_04_05_05_01': 53/1468 (3.61%)
Evaluation on propertest data (2441 items):
at_At1g32490 mips_03 "putative RNA helicase (At1g32490)"
mips_03_03
mips_03_03_01
mips_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_05
mips_05_04
mips_14
mips_14_04
mips_25
mips_25_05
mips_40_10
mips_40_10_99
mips_63
mips_63_03
mips_63_19
at_At1g48000 - mips_04_05_01_04_01 "putative transcription factor MYB112"
mips_04_05_01_04_03
mips_14_10
mips_14_10_02
mips_14_10_02_01
mips_40_10_03
at_At1g54270 mips_04_05_05 "Eukaryotic Initiation Factor 4A-2"
mips_04_05_05_01
mips_05
mips_05_04
mips_25_05_10
at_At1g59610 - mips_03_03 "dynamin-like protein CF1"
mips_03_03_01
mips_03_03_01_01
mips_06_04
mips_13_03
mips_13_03_01
mips_30_04
mips_40_02
mips_63_06
at_At2g01130 mips_04_05_05 "putative ATP-dependent RNA helicase A"
mips_04_05_05_01
mips_05_04
mips_25_05_23
mips_40_10_03
mips_40_10_99
at_At2g35340 mips_03 "putative pre-mRNA splicing factor RNA helicase"
mips_03_03
mips_03_03_01
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_05
mips_05_04
mips_14
mips_14_04
mips_25
mips_25_05
mips_40_10_99
mips_63_03
mips_63_19
at_At3g09620 - mips_04_05_05 "putative RNA helicase"
mips_04_05_05_11
mips_05
mips_05_04
mips_05_04_01
mips_14_01
mips_33
mips_33_03
mips_33_03_02
mips_63_19_03
at_At3g18600 mips_03_01_09 "DEAD box helicase protein, putative"
mips_03_01_09_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05_04_01
mips_40_10_07
mips_40_10_99
at_At3g19760 mips_04_01 "RNA helicase, putative"
mips_04_01_04
mips_04_05_05
mips_04_05_05_01
mips_05_04
mips_25_05_10
at_At3g58510 mips_04_01 "ATP-dependent RNA helicase-like protein"
mips_04_01_04
mips_04_05_05_01
mips_33
mips_33_03
mips_33_03_02
at_At3g61240 mips_04_01 "DEAD box RNA helicase RH12"
mips_04_01_04
mips_04_05_05_01
mips_04_99
mips_63_19_03
at_At4g00660 mips_04_01 "RNA helicase like protein"
mips_04_01_04
mips_04_05_05_01
mips_04_99
at_At4g36080 - mips_03_03_01_03 "ATM-like protein"
mips_14_01_03
mips_25_05_03
mips_25_05_09
mips_25_05_25
at_At5g05450 mips_03 "ATP-dependent RNA helicase-like protein"
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_04_01
mips_04_01_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05
mips_05_04
mips_05_04_01
mips_40_07
mips_40_10_07
mips_40_10_99
mips_40_16
mips_63_03
mips_63_03_03
mips_63_19
at_At5g10370 mips_03_03_01 "putative protein"
mips_04_05_05_01
mips_04_05_99
mips_05_07
at_At5g60990 mips_03_01_03 "replication protein A1 - like"
mips_03_01_05
mips_04_05_05
mips_04_05_05_01
mips_63_03_03
mips_63_19_03
Propertest Accuracy: 12/16 (75.00%)
Propertest Frequency class 'mips_04_05_05_01': 76/2441 (3.11%)
New (unknown) data (1468 items):
at_At1g10340 - no entry null
at_At1g26370 - no entry null
at_At1g26760 - no entry null
at_At1g33390 - no entry null
at_At1g66230 - no entry null
at_At1g72850 - no entry null
at_At1g72870 - mips_11_05_01 "hypothetical protein"
mips_11_05_03
at_At1g74080 - no entry null
at_At1g79180 - no entry null
at_At2g12600 - no entry null
at_At2g14050 - mips_40_10_03 "putative DNA replication licensing factor"
at_At2g17930 - mips_14_01 "hypothetical protein"
mips_14_01_03
mips_25_05_09
mips_25_05_25
mips_63_17
mips_63_17_01
at_At2g18330 - mips_02_11_05 "AAA-type like ATPase"
at_At2g38410 - mips_08_07 "unknown protein"
mips_08_07_07
mips_30_08
mips_30_22
mips_40_08
at_At2g45540 - mips_30_25 "unknown protein"
at_At3g09660 - no entry null
at_At3g62610 - no entry null
at_At4g03480 - mips_30_04 "hypothetical protein"
mips_40_04
mips_63_07
at_At4g17780 - mips_01_01_04 "MYB transcription factor like protein"
mips_01_03
mips_01_03_13
at_At4g25560 - no entry null
at_At4g28080 - mips_05 "putative protein"
mips_05_04
mips_14
mips_14_04
mips_25
mips_25_05
mips_30
mips_30_16
mips_40_03
at_At4g29950 - mips_25_05_25 "unknown protein"
mips_63_17_01
at_At4g34990 - no entry null
at_At5g06110 - mips_40_10_03 "cell division related protein-like"
at_At5g07690 - no entry null
at_At5g16600 - no entry null
at_At5g45420 - no entry null
at_At5g48780 - no entry null
at_At5g52260 - no entry null
at_At5g52600 - no entry null
------------------
Rule 1431
scanregexp_atp_gtp_a(_orf_0,_scanregexp_id_1),profscan(_orf_0,_profscan_id_2,_ipr_3),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_3) = 1
scanregexp_atp_gtp_a(_orf_0,_scanregexp_id_1),hmmtigr(_orf_0,_hmmtigr_id_2,_ipr_3) = 0
ipr_RNA-binding_region_RNP-1___RNA_recognition_motif_(_orf_0,_ipr_1) = 0
ipr_G-protein_beta_WD-40_repeat(_orf_0,_ipr_1) = 0
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_3,_ipr_2),fprintscan(_orf_0,_fprintscan_id_4,_ipr_2) = 0
ss(_1,_3,c,_2),beta_dist(_1,5.15-11.94),b_len(_2,1.0-3.0) = 0
ss(_1,_3,a,_2),a_len(_3,3.0-6.0),ss(_1,_2,c,_4),notequal(_4,_3),notequal(_4,_2),a_len(_4,9.0-11.0) = 1
-> class mips_04_05_05_11 "control of mRNA stability"
Evaluation on training data (2913 items):
at_At1g16280 mips_04_05_05 "putative ATP-dependent RNA helicase"
mips_04_05_05_11
mips_05_04
mips_05_04_01
mips_14_01
mips_33
mips_33_03
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At1g27900 - mips_04_05_05 "ATP-dependent RNA helicase (At1g27900)"
mips_04_05_05_01
at_At1g51380 mips_04 "putative RNA helicase"
mips_04_01
mips_04_01_04
mips_04_05
mips_04_05_01
mips_04_05_05
mips_04_05_05_11
mips_05
mips_05_04
mips_05_04_01
mips_14
mips_14_01
mips_14_04
mips_25
mips_25_05
mips_25_05_10
mips_33
mips_33_03
mips_33_03_02
mips_40_10
mips_63
mips_63_03
mips_63_19
mips_63_19_03
mips_98
at_At1g55150 mips_04_05_05_11 "Unknown protein (At1g55150; T7N22.9)"
mips_05_04_01
mips_33
mips_33_03
mips_33_03_02
mips_63_19_03
at_At1g58050 mips_04_05_05_01 "hypothetical protein"
mips_04_05_05_01_10
mips_04_05_05_11
at_At1g71280 - mips_04_01 "putative DEAD/DEAH box helicase"
mips_04_01_04
mips_04_05_05_01
at_At1g72730 - mips_04 "Eukaryotic initiation factor 4A like protein"
mips_04_05_05
mips_04_05_05_01
mips_14_04
mips_25_05
mips_25_05_10
mips_40_10
mips_63_19
mips_63_19_03
at_At2g07750 mips_04_05_05 "putative RNA helicase"
mips_04_05_05_11
mips_05_04_01
mips_33
mips_33_03
mips_33_03_02
mips_63_19_03
at_At2g21380 - mips_08 "putative kinesin heavy chain"
mips_08_22
mips_08_22_01
mips_25
mips_25_05
mips_25_05_19
mips_25_05_19_09
mips_30
mips_30_04
mips_30_04_05
mips_40
mips_40_04
mips_40_16
mips_63
mips_63_01
mips_63_06
mips_63_19
at_At2g35920 mips_04 "ATP-dependent RNA helicase A like protein"
mips_04_05
mips_04_05_01
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06
mips_06_10
mips_14
mips_14_04
mips_25
mips_25_05
mips_40
mips_40_10
mips_63
mips_63_01
mips_63_03
mips_63_03_03
mips_63_19
mips_63_19_03
at_At2g42520 mips_04_05_05 "putative ATP-dependent RNA helicase"
mips_04_05_05_01
mips_04_05_05_11
mips_05_04_01
mips_33_03_02
at_At2g45810 - mips_04_05_05_01 "putative ATP-dependent RNA helicase"
mips_04_99
at_At2g47330 mips_04_05_05 "putative ATP-dependent RNA helicase"
mips_04_05_05_11
mips_05_04
mips_05_04_01
mips_14_01
mips_33
mips_33_03
mips_33_03_02
mips_45
mips_45_03
mips_45_03_12
mips_47
mips_47_03
mips_47_03_05
mips_47_03_05_01
mips_47_03_09
mips_47_03_09_01
mips_47_03_11
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_02
mips_63_19_03
at_At3g13920 - mips_04_05_05 "eukaryotic protein synthesis initiation factor 4A"
mips_04_05_05_01
mips_05
mips_05_04
mips_25_05_10
at_At3g22310 mips_04_05_05_11 "putative RNA helicase"
mips_05_04_01
mips_33
mips_33_03
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At3g22330 mips_04_05_05_11 "DEAD-Box RNA helicase like protein"
mips_05_04_01
mips_33_03_02
mips_63_19_03
at_At3g26560 mips_04_05_05 "ATP-dependent RNA helicase, putative"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06_10
mips_40_10_99
at_At3g53110 mips_04_05_05 "RNA helicase -like protein"
mips_04_05_05_11
mips_05_04_01
mips_33_03_02
mips_45_03_12
mips_47_03_05
mips_47_03_05_01
mips_47_03_09
mips_47_03_09_01
mips_47_03_11
mips_47_03_11_07
mips_47_03_21
mips_47_03_21_03
mips_47_03_21_03_02
mips_63_19_03
at_At3g58570 - mips_04_01 "ATP-dependent RNA helicase-like protein"
mips_04_01_04
mips_04_05_05_01
mips_33
mips_33_03
mips_33_03_02
at_At3g62310 - mips_04_05_05 "ATP-dependent RNA helicase-like protein"
mips_04_05_05_01
at_At4g01020 - mips_03 "putative protein"
mips_03_03
mips_03_03_01
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_99
mips_05
mips_05_07
mips_30
mips_30_10
mips_40_10_99
mips_63_03
mips_63_19
at_At4g16680 - mips_04_05_05 "RNA helicase"
mips_04_05_05_01
mips_05_07
mips_30_10
at_At4g33370 mips_04_05_05 "putative protein"
mips_04_05_05_11
mips_05_04_01
mips_45_03_12
mips_47_03_05
mips_47_03_05_01
mips_47_03_09
mips_47_03_09_01
at_At5g01310 - mips_01_03_01 "putative protein"
mips_01_03_01_01
mips_01_03_01_01_99
mips_03_03
mips_03_03_01
at_At5g08610 - mips_03_01_09 "RNA helicase-like protein"
mips_03_01_09_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05_04
mips_05_04_01
mips_25_05_10
mips_40_07
mips_40_10_07
mips_40_10_99
mips_63_03_03
at_At5g11170 - mips_04 "DEAD BOX RNA helicase RH15 - like protein"
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_99
mips_05
mips_05_01
mips_05_01_01
mips_05_01_99
mips_05_04
mips_05_04_01
mips_40
mips_40_10
mips_63
mips_63_03
mips_63_03_03
mips_63_19
mips_63_19_03
mips_98
at_At5g11200 - mips_04_05_05_01 "DEAD BOX RNA helicase RH15"
mips_04_05_05_01_99
mips_05_01
mips_05_01_01
mips_05_01_99
mips_05_04_01
mips_63_03_03
mips_63_19_03
at_At5g14230 - mips_63_07 "ankyrin - like protein"
mips_67_04
mips_67_04_01
mips_67_04_01_02
at_At5g14610 mips_04_05_05_11 "DRH1 DEAD box protein - like"
mips_05_04_01
mips_33_03_02
mips_63_19_03
at_At5g39840 - mips_01_03_16 "putative RNA helicase"
mips_02_13
mips_02_13_03
mips_02_13_05
mips_04_01
mips_04_01_04
mips_04_05_05_01
mips_04_99
mips_05_07
mips_63_03_03
at_At5g51280 mips_04_05_05_11 "DEAD-box protein abstrakt"
mips_05_04_01
mips_14_10
mips_14_10_02
mips_45
mips_45_03
mips_45_03_12
mips_47_03_05
mips_47_03_05_01
at_At5g63120 mips_04_05_05_11 "ATP-dependent RNA helicase-like protein"
mips_05_04_01
mips_33
mips_33_03
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At5g63630 mips_04_01 "RNA helicase"
mips_04_01_04
mips_04_05_05_11
mips_05_04_01
mips_33_03_02
mips_63_19_03
Training Accuracy: 17/33 (51.52%)
Training Frequency class 'mips_04_05_05_11': 26/2913 (0.89%)
Evaluation on validation data (1468 items):
at_At1g24290 - mips_03_01_03 "hypothetical protein"
mips_03_01_05
mips_03_01_05_01
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_03
mips_03_03_04_07
mips_30_16
mips_40_10_99
at_At1g31970 mips_04_05_05_11 "putative protein"
mips_05_04_01
mips_33
mips_33_03
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At1g71370 - mips_03 "putative ATP-dependent RNA helicase"
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_04_01
mips_04_01_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05
mips_05_04
mips_05_04_01
mips_40_07
mips_40_10_07
mips_40_10_99
mips_40_16
mips_63_03
mips_63_03_03
mips_63_19
at_At1g77050 - mips_04 ""
mips_04_01
mips_04_01_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_05
mips_05_04
mips_40_03
mips_40_10
mips_63
mips_63_03
mips_63_19
at_At2g47250 - mips_04_05_05 "putative pre-mRNA splicing factor RNA helicase"
mips_04_05_05_01
mips_05_04
mips_40_10_99
at_At2g47680 mips_04_05_05 "putative ATP-dependent RNA helicase A"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06_10
mips_40_10_99
mips_63_03_03
at_At3g06980 - mips_04_05_05_01 "putative DEAD/DEAH box helicase"
mips_05_04_01
mips_33_03_02
at_At3g09720 - mips_04_05_05_01 "putative RNA helicase"
mips_63_03_03
mips_63_19_03
at_At3g43210 - mips_08 "kinesin -like protein"
mips_08_22
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04
mips_30_04_05
mips_40_04
mips_40_16
mips_63_06
at_At4g34910 - mips_04_05_01_01 "RNA helicase (RH16)"
mips_04_05_05_01
mips_04_05_05_01_10
mips_05_01
mips_05_01_99
mips_05_04_01
mips_40_10_07
mips_63_03_03
at_At5g08620 mips_04_05_05 "RNA helicase (emb|CAA09212.1)"
mips_04_05_05_11
mips_05
mips_05_04_01
mips_14_01
mips_33_03_02
mips_63_03_03
mips_63_19_03
at_At5g13010 mips_04_05_05 "pre-mRNA splicing factor ATP-dependent RNA helicase -like protein"
mips_04_05_05_01
mips_04_05_05_01_10
mips_04_05_05_11
mips_06_10
mips_63_03_03
mips_63_19_03
at_At5g54910 - mips_03_01_09 "RNA helicase-like protein"
mips_03_01_09_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05_04_01
mips_40_10_07
mips_63_03_03
at_At5g61140 - mips_04 "RNA helicase - like protein"
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_40_10
mips_40_10_99
mips_63
mips_63_03
mips_63_19
at_At5g65900 - mips_03_01 "ATP-dependent RNA helicase-like"
mips_03_01_09
mips_03_01_09_05
mips_04_01
mips_04_01_04
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05
mips_05_04
mips_05_04_01
mips_30_01
mips_40_07
mips_40_10_07
mips_40_10_99
mips_40_16
mips_63_03_03
Validation Accuracy: 4/15 (26.67%)
Validation Frequency class 'mips_04_05_05_11': 8/1468 (0.54%)
Evaluation on propertest data (2441 items):
at_At1g32490 - mips_03 "putative RNA helicase (At1g32490)"
mips_03_03
mips_03_03_01
mips_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_05
mips_05_04
mips_14
mips_14_04
mips_25
mips_25_05
mips_40_10
mips_40_10_99
mips_63
mips_63_03
mips_63_19
at_At1g48000 - mips_04_05_01_04_01 "putative transcription factor MYB112"
mips_04_05_01_04_03
mips_14_10
mips_14_10_02
mips_14_10_02_01
mips_40_10_03
at_At1g54270 - mips_04_05_05 "Eukaryotic Initiation Factor 4A-2"
mips_04_05_05_01
mips_05
mips_05_04
mips_25_05_10
at_At1g59610 - mips_03_03 "dynamin-like protein CF1"
mips_03_03_01
mips_03_03_01_01
mips_06_04
mips_13_03
mips_13_03_01
mips_30_04
mips_40_02
mips_63_06
at_At2g01130 - mips_04_05_05 "putative ATP-dependent RNA helicase A"
mips_04_05_05_01
mips_05_04
mips_25_05_23
mips_40_10_03
mips_40_10_99
at_At2g13390 - mips_03_01_09 "pseudogene"
mips_03_01_09_05
mips_03_01_99
mips_30_10
mips_40_10_03
at_At2g42270 - mips_04_05_05_01 "ATP-dependent RNA helicase like protein"
at_At3g10180 - mips_08_22 "putative kinesin-like centromere protein"
mips_08_22_01
mips_25_05_19
mips_25_05_19_09
mips_30_04_05
mips_40_08
mips_63_06
at_At3g18600 - mips_03_01_09 "DEAD box helicase protein, putative"
mips_03_01_09_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05_04_01
mips_40_10_07
mips_40_10_99
at_At3g19760 - mips_04_01 "RNA helicase, putative"
mips_04_01_04
mips_04_05_05
mips_04_05_05_01
mips_05_04
mips_25_05_10
at_At3g58510 - mips_04_01 "ATP-dependent RNA helicase-like protein"
mips_04_01_04
mips_04_05_05_01
mips_33
mips_33_03
mips_33_03_02
at_At3g61240 - mips_04_01 "DEAD box RNA helicase RH12"
mips_04_01_04
mips_04_05_05_01
mips_04_99
mips_63_19_03
at_At4g00660 - mips_04_01 "RNA helicase like protein"
mips_04_01_04
mips_04_05_05_01
mips_04_99
at_At4g36080 - mips_03_03_01_03 "ATM-like protein"
mips_14_01_03
mips_25_05_03
mips_25_05_09
mips_25_05_25
at_At5g05450 - mips_03 "ATP-dependent RNA helicase-like protein"
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_04_01
mips_04_01_04
mips_04_05
mips_04_05_05
mips_04_05_05_01
mips_04_05_05_01_10
mips_05
mips_05_04
mips_05_04_01
mips_40_07
mips_40_10_07
mips_40_10_99
mips_40_16
mips_63_03
mips_63_03_03
mips_63_19
at_At5g10370 - mips_03_03_01 "putative protein"
mips_04_05_05_01
mips_04_05_99
mips_05_07
at_At5g60990 - mips_03_01_03 "replication protein A1 - like"
mips_03_01_05
mips_04_05_05
mips_04_05_05_01
mips_63_03_03
mips_63_19_03
Propertest Accuracy: 0/17 (0.00%)
Propertest Frequency class 'mips_04_05_05_11': 7/2441 (0.29%)
New (unknown) data (1468 items):
at_At1g10340 - no entry null
at_At1g18370 - mips_30 "AtNACK1 kinesin-like protein (AtNACK1)"
mips_30_04
mips_40_04
mips_40_16
mips_63_01
mips_63_06
mips_63_19
at_At1g26370 - no entry null
at_At1g26760 - no entry null
at_At1g48650 - mips_04_05_05 "hypothetical protein"
mips_40_10_03
mips_40_10_99
at_At1g66230 - no entry null
at_At1g72850 - no entry null
at_At1g72870 - mips_11_05_01 "hypothetical protein"
mips_11_05_03
at_At1g74080 - no entry null
at_At1g79180 - no entry null
at_At2g05390 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_02
mips_29_99
at_At2g07550 - no entry null
at_At2g14050 - mips_40_10_03 "putative DNA replication licensing factor"
at_At2g17930 - mips_14_01 "hypothetical protein"
mips_14_01_03
mips_25_05_09
mips_25_05_25
mips_63_17
mips_63_17_01
at_At2g18330 - mips_02_11_05 "AAA-type like ATPase"
at_At2g19840 - no entry null
at_At2g22610 - mips_08_22 "putative kinesin heavy chain"
mips_08_99
mips_63_06
at_At2g38410 - mips_08_07 "unknown protein"
mips_08_07_07
mips_30_08
mips_30_22
mips_40_08
at_At2g40700 - mips_04_99 "ATP-dependent RNA helicase"
mips_63_19_03
at_At3g09660 - no entry null
at_At3g16630 - mips_08_22 "kinesin-like protein"
mips_08_22_01
mips_30_04_05
mips_40_04_05
mips_63_06
at_At3g23670 - mips_06_04 "hypothetical protein"
mips_30
mips_40_04
mips_63_01
mips_63_06
mips_63_19
at_At3g44730 - mips_06_04 "kinesin-like protein heavy chain (KP1)"
mips_08
mips_08_99
mips_30_04
mips_40_04
mips_40_07
mips_40_08
mips_40_16
mips_63_06
at_At3g62610 - no entry null
at_At4g03480 - mips_30_04 "hypothetical protein"
mips_40_04
mips_63_07
at_At4g04420 - mips_29_02 "putative transposon protein"
at_At4g14370 - mips_03_99 "disease resistance N like protein"
at_At4g17890 - no entry null
at_At4g25560 - no entry null
at_At4g29950 - mips_25_05_25 "unknown protein"
mips_63_17_01
at_At4g34990 - no entry null
at_At5g06110 - mips_40_10_03 "cell division related protein-like"
at_At5g07690 - no entry null
at_At5g16600 - no entry null
at_At5g45420 - no entry null
at_At5g48780 - no entry null
at_At5g52260 - no entry null
at_At5g52600 - no entry null
at_At5g55020 - no entry null
at_At5g62190 - mips_05_07 "putative RNA helicase (MMI9.2)"
mips_40_10_07
------------------
Rule 218
eval(_1,_2,0.0-9.0e-25),mol_wt(_2,38820.0-54204.0),sq_len(_2,15.0-349.0) = 0
scop_b.82 <= 0.0039
seq_gravy > -0.415
seq_dc2_ratio <= 0.45
-> class mips_13_01_01_01 "homeostasis of metal ions (Na, K, Ca etc.)"
Evaluation on training data (2913 items):
at_At1g01340 - mips_10_05_01 "CaM-regulated potassium ion channel (ACBK1)"
mips_10_05_01_10
mips_13_05
mips_47
mips_47_03
mips_47_03_03
mips_47_03_03_01
mips_67_01
mips_67_01_01
mips_67_04
at_At2g18960 mips_02_45 "plasma membrane proton ATPase (PMA)"
mips_02_45_99
mips_06_07_03
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_03
mips_13_03_99
mips_67_50_22
mips_67_50_25
at_At2g19110 mips_08_19 "putative cadmium-transporting ATPase"
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_67_04_01
mips_67_04_01_01
mips_67_50
mips_67_50_22
at_At2g25600 - mips_67_01 "putative potassium transporter/channel"
mips_67_01_01
mips_67_04_01
mips_67_04_01_02
at_At2g26650 mips_10_01_09 "K+ transporter, AKT1"
mips_10_01_09_07
mips_10_05_01
mips_10_05_01_10
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_47_03_03
mips_47_03_03_01
mips_63_09
mips_63_17_03
mips_67_01
mips_67_01_01
mips_67_04_01
mips_67_04_01_02
at_At2g46450 mips_10_01_09 "putative cyclic nucleotide-regulated ion channel protein"
mips_10_01_09_07
mips_10_05_01
mips_10_05_01_10
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_47_03_03
mips_47_03_03_01
mips_67_01
mips_67_01_01
at_At3g17700 mips_06_10 "cyclic nucleotide-binding transporter 1 (CNBT1)"
mips_10_01_09
mips_10_01_09_07
mips_10_05_01
mips_10_05_01_10
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_63_09
mips_63_17_03
mips_67_01
mips_67_01_01
mips_67_04
at_At3g22910 - mips_47 "calmodulin-stimulated calcium-ATPase, putative"
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_67_04
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_22
mips_67_50_25
at_At3g48010 mips_10_01_09 "putative cyclic nucleotide-gated channel"
mips_10_01_09_07
mips_10_05_02
mips_10_05_02_30
mips_13_01_01
mips_13_01_01_01
mips_63_09
mips_63_17_03
mips_67_01
mips_67_01_01
at_At3g57330 - mips_40_02 "Ca2+-transporting ATPase-like protein"
mips_47
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_67_04
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_25
at_At3g60330 mips_02_45 "plasma membrane H+-ATPase - like"
mips_02_45_99
mips_06_07_03
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_03
mips_13_03_99
mips_67_50
mips_67_50_22
mips_67_50_25
at_At4g00510 - mips_10_01_05_05 "predicted protein with unknown function"
mips_10_01_05_05_01
mips_20_25_01
mips_20_25_01_01
mips_67_01
at_At4g22200 mips_10 "potassium channel (AKT2)"
mips_10_01_09
mips_10_01_09_07
mips_10_05_01
mips_10_05_01_10
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_63_09
mips_63_17_03
mips_67_01
mips_67_01_01
mips_67_04_01
mips_67_04_01_02
at_At4g30110 - mips_40_08 "cadmium-transporting ATPase-like protein"
mips_63_19
mips_67
mips_67_04
mips_67_04_01
mips_67_04_01_01
mips_67_50
mips_67_50_25
at_At4g30190 mips_02 "H+-transporting ATPase type 2, plasma membrane"
mips_02_45
mips_02_45_99
mips_06_07
mips_06_07_03
mips_06_10
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_03
mips_13_03_99
mips_40_02
mips_67_04
mips_67_50_22
mips_67_50_25
at_At4g30360 - mips_10_05_01 "cyclic nucleotide and calmodulin-regulated ion channel-like protein"
mips_10_05_01_10
mips_13_05
mips_47_03_03
mips_47_03_03_01
mips_67_01
mips_67_01_01
at_At4g37270 mips_02_45 "Cu2+-transporting ATPase-like protein"
mips_02_45_99
mips_06_07_03
mips_13_01_01
mips_13_01_01_01
mips_67_50_22
mips_67_50_25
at_At5g21930 - mips_40_02 "metal-transporting ATPase - like protein"
mips_63_19
mips_67
mips_67_04
mips_67_04_01
mips_67_04_01_01
mips_67_50
mips_67_50_25
at_At5g23630 - mips_13 "cation-transporting ATPase"
mips_13_01
mips_13_01_01
mips_13_01_01_99
mips_63_19
mips_67
mips_67_04
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_22
mips_67_50_25
at_At5g37500 mips_06_10 "guard cell outward rectifying K+ channel"
mips_10_01_09
mips_10_01_09_07
mips_10_05_01
mips_10_05_01_10
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_47
mips_47_03
mips_47_03_03
mips_47_03_03_01
mips_67_01
mips_67_01_01
mips_67_04
mips_67_04_01
mips_67_04_01_02
at_At5g39900 - mips_05_04_02 "GTP-binding protein-like"
mips_10_01_05_05
mips_63_19_05
at_At5g54100 - mips_03 "unknown protein"
mips_03_01
mips_03_01_03
mips_03_03
mips_03_03_01
mips_10
mips_10_01
mips_10_01_05
mips_10_01_05_01
mips_10_01_09
mips_10_01_09_07
mips_10_05_02
mips_10_05_02_30
mips_30
mips_30_02
mips_30_04
mips_40_04
mips_62_01_01
mips_62_01_07
mips_63_01
mips_63_09
mips_67
mips_67_01
mips_67_01_01
mips_98
at_At5g57110 - mips_47_03_01 "Ca2+-transporting ATPase-like protein (emb|CAB79748.1)"
mips_47_03_01_01
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_25
at_At5g57940 - mips_06_10 "cyclic nucleotide and calmodulin-regulated ion channel (emb|CAB40130.1)"
mips_10_05
mips_10_05_01
mips_10_05_01_10
mips_13_05
mips_20
mips_40_02
mips_47
mips_47_03
mips_47_03_03
mips_47_03_03_01
mips_67_01
mips_67_01_01
mips_67_04
Training Accuracy: 11/24 (45.83%)
Training Frequency class 'mips_13_01_01_01': 85/2913 (2.92%)
Evaluation on validation data (1468 items):
at_At1g69840 - mips_03_01_03 "unknown protein"
mips_10_05_02
mips_10_05_02_30
mips_48
mips_67_01
mips_67_01_01
at_At2g24520 mips_01 "putative plasma membrane proton ATPase"
mips_02
mips_02_45
mips_02_45_99
mips_06
mips_06_07
mips_06_07_03
mips_06_10
mips_13
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_03
mips_13_03_99
mips_40
mips_40_02
mips_63
mips_63_19
mips_67
mips_67_04
mips_67_50
mips_67_50_22
mips_67_50_25
mips_99
at_At2g41560 - mips_47_03_01 "putative Ca2+-ATPase"
mips_47_03_01_01
mips_67_04_01
mips_67_04_01_02
mips_67_50_25
at_At2g46440 mips_10_01_09 "putative cyclic nucleotide-regulated ion channel protein"
mips_10_01_09_07
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_63_09
mips_63_17_03
mips_67_01
mips_67_01_01
at_At4g01010 mips_06_10 "cyclic nucleotide gated channel (CNGC4) like protein"
mips_10_01_09
mips_10_01_09_07
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_63_09
mips_63_17
mips_63_17_03
mips_67_01
mips_67_01_01
mips_67_04
Validation Accuracy: 3/5 (60.00%)
Validation Frequency class 'mips_13_01_01_01': 49/1468 (3.34%)
Evaluation on propertest data (2441 items):
at_At3g47950 mips_02 "H+-transporting ATPase - like protein"
mips_02_45
mips_02_45_99
mips_06_07
mips_06_07_03
mips_06_10
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_03
mips_13_03_99
mips_40_02
mips_67_04
mips_67_50
mips_67_50_22
mips_67_50_25
at_At3g63380 - mips_47 "Ca2+-transporting ATPase -like protein"
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_67_04
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_22
mips_67_50_25
at_At4g30120 mips_08_19 "cadmium-transporting ATPase-like protein"
mips_11_05_01
mips_11_05_01_03
mips_11_05_01_03_03
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_63_17
mips_63_17_09
mips_67_04
mips_67_04_01
mips_67_04_01_01
mips_67_50
mips_67_50_22
at_At4g32500 - mips_13 "potassium channel - protein"
mips_13_05
mips_20
mips_30
mips_30_04
mips_40_02
mips_40_04
mips_63_07
mips_63_19
mips_67
mips_67_01
mips_67_01_01
mips_67_04
mips_67_04_01
mips_67_04_01_02
at_At4g37640 - mips_47_03_01 "plasma membrane-type calcium ATPase (ACA2)"
mips_47_03_01_01
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_25
at_At5g46240 mips_06_10 "potassium channel protein KAT1 (pir||S32816)"
mips_10_01_09
mips_10_01_09_07
mips_10_05_02
mips_10_05_02_30
mips_13_01_01
mips_13_01_01_01
mips_13_05
mips_30_04
mips_63_09
mips_63_17_03
mips_67_01
mips_67_01_01
mips_67_04
at_At5g53010 - mips_40_02 "Ca2+-transporting ATPase-like protein"
mips_47
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_67_04
mips_67_04_01
mips_67_04_01_02
mips_67_50
mips_67_50_25
at_At5g53130 mips_10_01_09 "cyclic nucleotide-regulated ion channel (emb|CAA76178.1)"
mips_10_01_09_07
mips_10_05_02
mips_10_05_02_30
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_63_09
mips_63_17_03
mips_67_01
mips_67_01_01
at_At5g54080 - mips_01_01 "homogentisate 1,2-dioxygenase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_01_10_05_05
mips_01_01_10_05_06
at_At5g62670 mips_02_45 "plasma membrane proton ATPase-like"
mips_02_45_99
mips_06_07_03
mips_06_10
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_03
mips_13_03_99
mips_67_04
mips_67_50_22
mips_67_50_25
at_At5g62740 - mips_10_05_02 "unknown protein"
mips_10_05_02_30
mips_14_01_05
mips_14_01_99
mips_45
mips_45_03
mips_45_03_03
mips_67_01
mips_67_01_01
Propertest Accuracy: 5/11 (45.45%)
Propertest Frequency class 'mips_13_01_01_01': 64/2441 (2.62%)
New (unknown) data (1468 items):
at_At1g10130 - mips_13_05 "putative calcium ATPase"
mips_13_07
mips_25_05_09
mips_63_17_01
mips_67_50_25
at_At1g17260 - mips_01 "H+-transporting ATPase AHA10"
mips_40
mips_40_02
mips_63
mips_63_01
mips_63_19
mips_67
mips_67_04
mips_67_50
mips_67_50_22
mips_67_50_25
mips_99
at_At1g50590 - no entry null
at_At1g63440 - mips_63_19 "ATP dependent copper transporter, putative"
mips_67
mips_67_50_25
at_At2g32650 - no entry null
at_At2g43120 - no entry null
at_At3g11150 - no entry null
at_At3g12940 - no entry null
at_At3g21360 - no entry null
at_At3g47230 - mips_01_01_99 "putative protein"
mips_20_20
mips_20_20_18
mips_40_10
at_At3g59220 - no entry null
at_At3g63290 - no entry null
at_At4g02980 - mips_03_99 "auxin-binding protein 1 precursor"
mips_20_20
mips_20_20_18
at_At4g10280 - no entry null
at_At4g13400 - no entry null
at_At4g17050 - no entry null
at_At5g07950 - no entry null
at_At5g19840 - no entry null
at_At5g44790 - mips_67_50 "COPPER-TRANSPORTING ATPASE RAN1 (RESPONSIVE-TO-ANTAGONIST 1)"
mips_67_50_25
------------------
Rule 813
scop_b.80 <= 2.4e-35
ss(_1,_3,c,_2),c_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,0.0-13.03) = 1
-> class mips_01_05_01_01 "C-compound, carbohydrate catabolism"
Evaluation on training data (2913 items):
at_At1g02460 mips_01_05_01_01_01 "polygalacturonase PG1, putative"
mips_30_01
at_At1g04680 mips_01_05 "unknown protein"
mips_01_05_01_01
mips_30
at_At1g05650 mips_01_05_01_01_01 "putative polygalacturonase"
at_At1g10640 mips_01_05_01_01_01 "similar to polygalacturonase-like protein"
mips_30_01
at_At1g11920 mips_01_05_01 "pectate lyase-like protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30_01
at_At1g17150 mips_01_05_01_01_01 "putative polygalacturonase"
at_At1g19170 mips_01_05_01_01_01 "putative protein"
mips_01_20_99
at_At1g23460 mips_01_05_01_01_01 "putative polygalacturonase precursor"
at_At1g30350 mips_01_05 "hypothetical protein"
mips_01_05_01_01
at_At1g43080 mips_01_05_01_01_01 "hypothetical protein"
at_At1g43090 mips_01_05_01 "hypothetical protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30_01
at_At1g43100 mips_01_05_01_01_01 "hypothetical protein"
at_At1g44980 mips_01 "hypothetical protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_99
mips_30
mips_30_01
mips_40
mips_40_01
at_At1g65570 mips_01_05_01 "hypothetical protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30_01
at_At1g70500 mips_01_05_01_01_01 "putative polygalacturonase"
at_At2g02720 mips_01_05_01_01_01 "putative pectate lyase"
at_At2g15450 mips_01_05_01_01_01 "putative polygalacturonase"
mips_30_01
at_At2g15470 mips_01_05_01_01 "putative polygalacturonase"
mips_01_05_01_01_01
at_At2g21610 mips_01_05_01_01 "putative pectinesterase"
mips_01_05_99
mips_01_20_01
mips_40_01
at_At2g23900 mips_01_05_01_01_01 "putative polygalacturonase"
mips_01_20_99
at_At2g47280 mips_01_05_01_01 "putative pectinesterase"
mips_01_05_99
mips_01_20_01
mips_40_01
at_At3g06770 mips_01_05_01_01_01 "unknown protein"
mips_01_20_99
mips_30_01
at_At3g07010 mips_01_05_01_01_01 "putative pectate lyase"
at_At3g07820 mips_01_05_01_01_01 "polygalacturonase (PGA3)"
at_At3g07840 mips_01_05_01_01_01 "putative polygalacturonase"
at_At3g16850 mips_01_05_01_01_01 "polygalacturonase like protein"
mips_01_20_99
mips_30_01
at_At3g24230 mips_01_05_01_01_01 "pectate lyase, putative"
at_At3g26610 mips_01_05_01_01_01 "polygalacturonase, putative"
mips_30_01
at_At3g29090 mips_01 "pectinesterase like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_99
mips_01_20
mips_01_20_01
mips_30
mips_30_01
mips_40
mips_40_01
at_At3g42950 mips_01_05_01 "polygalacturonase -like protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_99
mips_30_01
at_At3g48950 mips_01_05_01_01_01 "endo-polygalacturonase - like protein"
mips_01_20_99
mips_30_01
at_At3g53190 mips_01_05_01_01_01 "pectate lyase -like protein"
at_At4g01890 mips_01_05_01 "putative polygalacturonidase"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30_01
at_At4g18180 mips_01_05_01_01_01 "polygalacturonase-like protein"
mips_30_01
at_At4g22090 mips_01_05_01_01 "pectate lyase like protein"
mips_01_05_01_01_01
at_At4g23500 mips_01_05_01_01_01 "putative protein"
mips_01_20_99
at_At5g15110 mips_01_05_01_01_01 "pectate lyase -like protein"
at_At5g41870 mips_01_05_01 "polygalacturonase-like protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_99
at_At5g44830 mips_01_05_01_01 "polygalacturonase-like protein"
mips_01_05_01_01_01
at_At5g44840 mips_01_05_01_01_01 "polygalacturonase"
at_At5g63180 mips_01_05_01_01_01 "pectate lyase"
Training Accuracy: 41/41 (100.00%)
Training Frequency class 'mips_01_05_01_01': 349/2913 (11.98%)
Evaluation on validation data (1468 items):
at_At1g05660 mips_01_05_01 "putative polygalacturonase"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30_01
at_At1g48100 mips_01_05_01_01_01 "polygalacturonase PG1, putative"
at_At1g78400 mips_01_05_01_01_01 "similar to exopolygalacturonase precursor sp|Q00293|PGLX_ASPTU"
mips_30_01
at_At1g80170 mips_01_05_01_01_01 "putative polygalacturonase"
at_At2g15460 mips_01_05_01_01_01 "putative polygalacturonase"
mips_30_01
at_At2g40310 mips_01_05_01_01_01 "putative polygalacturonase"
at_At2g43860 mips_01_05_01 "putative polygalacturonase"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30_01
at_At2g43890 mips_01_05_01_01_01 "putative polygalacturonase"
at_At3g14040 mips_01_05_01_01_01 "putative polygalacturonase"
at_At4g23820 mips_01_05_01 "putative polygalacturonase"
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_99
mips_30_01
at_At4g32370 mips_01_05_01_01_01 "putative protein"
at_At4g33220 mips_01_05 "pectinesterase like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_99
mips_01_20
mips_01_20_01
mips_30
mips_30_01
mips_40_01
at_At4g33440 mips_01_05 "putative protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_99
mips_30
mips_30_01
at_At5g04310 mips_01_05_01_01_01 "pectate lyase-like protein"
mips_30_01
at_At5g09280 mips_01_05_01_01_01 "major pollen allergen-like protein"
at_At5g14650 mips_01_05_01_01 "polygalacturonase - like protein"
mips_01_05_01_01_01
at_At5g55720 mips_01_05_01_01_01 "pectate lyase"
mips_30_01
Validation Accuracy: 17/17 (100.00%)
Validation Frequency class 'mips_01_05_01_01': 154/1468 (10.49%)
Evaluation on propertest data (2441 items):
at_At1g14420 mips_01_05_01_01 "hypothetical protein"
at_At1g56710 mips_01_05_01 "polygalacturonase, putative"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30_01
at_At1g60590 mips_01_05_01_01_01 "putative polygalacturonase"
at_At1g80140 mips_01_05_01_01_01 ""
at_At2g26620 mips_01_05_01_01_01 "putative polygalacturonase"
at_At2g43880 mips_01_05_01_01_01 "putative polygalacturonase"
at_At3g07830 mips_01_05_01_01_01 "putative polygalacturonase"
at_At3g07850 mips_01_05 "exopolygalacturonase"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_30
at_At3g07970 mips_01_05_01_01_01 "putative polygalacturonase"
at_At3g15720 mips_01_05_01_01_01 "polygalacturonase - like predicted GPI-anchored protein"
at_At3g24670 mips_01_05_01_01_01 "pectate lyase, putative"
at_At3g55140 mips_01_05_01_01_01 "pectate lyase -like protein"
at_At3g57790 mips_01_05_01_01_01 "putative protein"
mips_30_01
at_At3g59850 mips_01_05 "polygalacturonase-like protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_30
at_At4g13210 mips_01_05_01_01_01 "pectate lyase like protein"
at_At4g13710 mips_01_05 "putative pectate lyase A11"
mips_01_05_01_01
mips_30
at_At4g13760 mips_01_05 "putative polygalacturonase"
mips_01_05_01_01
mips_30
at_At5g17200 mips_01_05_01_01 "polygalacturonase-like protein"
at_At5g39910 mips_01_05_01_01_01 "polygalacturonase-like protein"
at_At5g48900 mips_01_05_01_01_01 "pectate lyase"
Propertest Accuracy: 20/20 (100.00%)
Propertest Frequency class 'mips_01_05_01_01': 241/2441 (9.87%)
New (unknown) data (1468 items):
at_At1g02790 - no entry null
at_At1g05310 - mips_01_05_99 "putative pectin methylesterase"
mips_01_20_01
mips_40_01
at_At1g67750 - no entry null
at_At1g69940 - mips_01_05_99 "putative pectin methylesterase"
mips_40_01
at_At2g19150 - mips_01_05_99 "putative pectinesterase"
mips_01_20_01
mips_40_01
at_At2g36700 - mips_01_05_99 "putative pectinesterase"
mips_01_20_01
mips_40_01
at_At2g36710 - mips_01_05_99 "putative pectinesterase"
mips_01_20_01
mips_40_01
at_At3g09540 - no entry null
at_At3g17060 - mips_01_05_99 "pectinesterase, putative"
mips_40_01
at_At3g24130 - mips_01_05_99 "pectinesterase, putative"
mips_01_20_01
mips_30_01
mips_40_01
at_At3g27400 - no entry null
at_At3g54920 - no entry null
at_At3g57510 - no entry null
at_At3g61490 - mips_01_20_99 "putative protein"
at_At4g22080 - no entry null
at_At4g24780 - no entry null
at_At4g32380 - mips_01_05_99 "putative protein"
at_At4g35670 - no entry null
at_At5g07410 - mips_01_05_99 "pectin methyl-esterase-like protein"
mips_01_20_01
mips_40_01
at_At5g07420 - mips_01_05_99 "pectin methyl-esterase-like protein"
mips_40_01
at_At5g07430 - mips_01_05_99 "pectin methyl-esterase-like protein"
mips_30_01
mips_40_01
at_At5g18990 - mips_01_05_99 "pectin methyl esterase -like protein"
mips_01_20_01
mips_40_01
at_At5g19730 - mips_01_05_99 "pectin methylesterase-like protein"
mips_40_01
at_At5g27530 - no entry null
at_At5g47500 - mips_01_05_99 "pectin methylesterase-like"
mips_30_01
mips_40_01
at_At5g48140 - no entry null
at_At5g55590 - mips_01_05_99 "putative protein"
mips_01_20_01
mips_40_01
at_At5g61680 - mips_01_05_99 "pectin methyl-esterase - like protein"
mips_40_01
------------------
Rule 259
profscan(_orf_0,_profscan_id_1,_ipr_2) = 1
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),fprintscan(_orf_0,_fprintscan_id_3,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_4,_ipr_2) = 0
ss(_1,_3,b,_2),beta_dist(_1,29.93-101.0),c_len(_2,9.0-11.0) = 0
ss(_1,_3,c,_2),c_len(_3,11.0-15.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),c_len(_4,15.0-30.0) = 0
ss(_1,_3,c,_2),c_len(_3,11.0-15.0),ss(_1,_5,c,_4),notequal(_5,_3),notequal(_5,_2),notequal(_4,_3),notequal(_4,_2),a_len(_4,30.0-1200.0) = 0
ss(_1,_3,b,_2),c_len(_2,6.0-9.0),ss(_1,_2,c,_4),notequal(_4,_2),notequal(_4,_3),a_len(_4,3.0-6.0) = 0
scop_c.69 <= 5.3e-09
seq_cm1_ratio <= 0.106
-> class mips_01_05_01_01 "C-compound, carbohydrate catabolism"
Evaluation on training data (2913 items):
at_At1g64670 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At1g77420 mips_01_05_01_01_09 "putative lipase"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At2g14260 mips_01_05_01_01_09 "proline iminopeptidase"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At2g19550 mips_01 "putative esterase"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_06
mips_01_06_04
mips_11
mips_11_07
mips_13
mips_13_11
mips_99
at_At2g23550 mips_01_05_01_01_09 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At2g23560 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At2g23580 mips_01_05_01_01 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20_99
mips_06_13
mips_11_05
mips_11_05_03
mips_40_19
at_At2g23610 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At2g36290 mips_01_02 "unknown protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_01
mips_11_07
mips_40_19
at_At3g23540 mips_01_05_01_01_01 "unknown protein"
mips_01_06_04
at_At3g24420 mips_01_02 "unknown protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_11_05
mips_11_07_01
at_At3g29770 mips_01_02 "alpha/beta hydrolase, putative"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_11_05
mips_11_05_03
mips_40_19
at_At3g44520 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_40_19
at_At3g47590 mips_01_05_01_01_01 "putative protein"
mips_01_06_04
mips_02_11_05
mips_11_07_01
at_At3g51000 mips_01_05_01_01_09 "epoxide hydrolase-like protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g52570 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g55190 mips_01_02 "lipase -like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At4g10030 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At4g10050 mips_01_05_01_01 "lipase like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_02_11_05
mips_06_07_99
mips_62_01_01
mips_62_02
mips_62_02_01
mips_62_02_01_02
at_At4g14290 mips_01_05_01_01_01 "hypothetical protein"
mips_01_06_04
at_At4g15960 mips_01_05_01_01_09 "putative epoxide hydrolase"
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_40_19
at_At4g24140 mips_01_05 "putative protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_04
mips_01_25
mips_01_25_07
mips_47_03_11
mips_47_03_11_03
mips_63_09
at_At4g36610 mips_01_02 "unknown protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_07
mips_06_13
mips_11_01
at_At4g37140 mips_01_02 "putative protein (partial)"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At4g37150 mips_01_02 "hydroxynitrile lyase like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At5g02970 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_11_07
mips_40_19
at_At5g09430 mips_01_02 "putative hydrolase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_02_11_05
mips_11_07_01
at_At5g10300 mips_01_02 "alpha-hydroxynitrile lyase-like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At5g13800 mips_01_05_01_01_09 "putative protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At5g19850 mips_01_05 "putative protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_03
mips_03_03_01
mips_03_03_01_02
mips_06
mips_06_07_03
mips_13
mips_13_11
mips_14_04
mips_40_10
mips_40_19
at_At5g38520 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_02_11_05
mips_11_07_01
at_At5g41900 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_11_07
mips_40_19
Training Accuracy: 32/32 (100.00%)
Training Frequency class 'mips_01_05_01_01': 349/2913 (11.98%)
Evaluation on validation data (1468 items):
at_At1g13610 mips_02 "hypothetical protein"
mips_01_05_01
mips_01_05_01_01
mips_01_06
at_At1g13820 mips_01_02 "hypothetical protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_02_11
mips_02_11_05
mips_11_07
mips_11_07_01
mips_40_19
at_At1g29840 mips_01_05_01_01_01 "hypothetical protein"
mips_01_06_04
mips_02_11_05
mips_11_07_01
mips_37
mips_37_03
mips_37_03_21
mips_37_03_21_01
mips_45
mips_45_03
mips_45_03_09
mips_45_03_19
mips_47_03_21
mips_47_03_21_01
mips_63_05
at_At1g72620 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_03_03_01_02
mips_06_07_03
mips_08_01
mips_10_01_05
mips_10_01_05_01
mips_11_01_01
mips_11_01_99
at_At1g74300 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At2g26750 mips_01_02 "putative epoxide hydrolase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_20_25_03
mips_20_25_03_04
mips_25_05_09
mips_25_05_10
mips_40_19
at_At2g45600 mips_01_05_01 "unknown protein"
mips_01_05_01_01
mips_11_07
mips_11_07_09
mips_11_10
mips_11_10_09
mips_13_03
mips_13_03_01
mips_13_03_05
mips_40_07
mips_40_27
mips_40_27_99
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_05
at_At3g09690 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g10840 mips_01_02 "putative alpha/beta hydrolase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_04
mips_01_25
mips_01_25_07
mips_11_07
mips_40_19
mips_40_27
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_03
mips_63_09
at_At3g50440 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At3g54240 mips_01_02 "putative protein (fragment)"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At4g09900 mips_01_02 "putative host response protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_99
mips_40_19
at_At4g12830 mips_01_05 "hydrolase like protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_40_19
at_At4g37470 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
at_At5g14390 - mips_14_04_03_01 "putative protein"
at_At5g14980 mips_01_02 "lysophospholipase -like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At5g16120 mips_01_05_01_01_09 "lipase-like protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_02_25
at_At5g17780 mips_01_02 "putative protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_11_07
mips_40_19
at_At5g38220 - mips_14_04_03 "putative protein"
mips_14_04_03_01
at_At5g38360 mips_01_02 "similar to unknown protein (pir||T03994)"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
at_At5g39220 mips_01_02 "putative protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_06_07
mips_06_13
mips_11
mips_11_07
mips_40_19
at_At5g58310 mips_01_02 "polyneuridine aldehyde esterase-like; also similar to alpha-hydroxynitrile lyase"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20
mips_01_20_99
mips_11_05
mips_11_05_03
mips_40_19
Validation Accuracy: 20/22 (90.91%)
Validation Frequency class 'mips_01_05_01_01': 154/1468 (10.49%)
Evaluation on propertest data (2441 items):
at_At1g17430 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_03_03_01_02
mips_06_07_03
mips_08_01
mips_40_19
at_At1g52750 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
at_At1g68900 mips_01_01_01_11 "hypothetical protein"
mips_01_01_01_11_09
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_01
mips_01_07_01
at_At1g74280 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At1g78210 mips_01_02 "unknown protein (At1g78210)"
mips_01_05
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_02_11_05
mips_06_13
mips_11_07_01
mips_40_19
at_At2g15230 - mips_01_06_04 "putative lysosomal acid lipase"
mips_01_25
mips_01_25_07
mips_40_25
mips_47_03_11
mips_47_03_11_03
mips_63_09
at_At2g23590 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_11_05_03
mips_11_07
mips_40_19
at_At2g23600 mips_01_02 "putative acetone-cyanohydrin lyase"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20
mips_01_20_99
mips_06_07
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_40_19
at_At2g23620 mips_01_05_01_01_09 "putative acetone-cyanohydrin lyase"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At2g26740 mips_01_02 "epoxide hydrolase (ATsEH)"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_40_19
at_At3g10870 mips_01_05 "putative alpha-hydroxynitrile lyase"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_06_13
mips_10_01_01
mips_11_05
mips_11_05_03
mips_40_19
at_At3g30380 - mips_14_04_03 "unknown protein"
mips_14_04_03_01
at_At4g16690 mips_01 "cyanohydrin lyase like protein"
mips_01_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20
mips_01_20_99
mips_11
mips_11_05
mips_11_05_03
mips_11_07
mips_40_19
at_At4g24160 mips_01_02 "putative protein"
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_04
mips_40_19
at_At4g24760 - mips_14_04_03 "unknown protein"
mips_14_04_03_01
at_At4g36530 mips_01_02 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_02_11
mips_02_11_05
mips_11_07
mips_11_07_01
mips_40_19
at_At5g17720 mips_01_02 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_11_07
mips_40_19
at_At5g22460 mips_01_05_01_01 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_01
mips_06_13
mips_40_19
at_At5g22860 - mips_06 "prolylcarboxypeptidase-like protein"
mips_06_07
mips_06_07_11
mips_06_13
mips_06_13_04
mips_06_13_04_01
mips_40
mips_40_25
mips_47
mips_47_03
mips_47_03_05
mips_47_03_05_01
mips_47_03_07
mips_47_03_07_01
mips_47_03_09
mips_47_03_09_01
mips_98
mips_99
at_At5g62180 - mips_11_07_09 "putative protein"
mips_11_10
mips_11_10_09
mips_47
mips_47_03
mips_47_03_11
mips_47_03_11_05
mips_47_03_11_07
Propertest Accuracy: 15/20 (75.00%)
Propertest Frequency class 'mips_01_05_01_01': 241/2441 (9.87%)
New (unknown) data (1468 items):
at_At1g06800 - no entry null
at_At1g08310 - no entry null
at_At1g10040 - mips_01_06_04 "unknown protein"
at_At1g11090 - mips_01_06_04 "lysophospholipase isolog"
mips_02_25
at_At1g18360 - mips_01_06_04 "lysophospholipase homolog, putative (At1g18360)"
mips_02_25
at_At1g19190 - mips_01_06_04 "hypothetical protein"
mips_11_10
mips_11_10_09
at_At1g26120 - mips_01 "unknown protein (At1g26120)"
mips_01_06
mips_01_25
mips_01_25_07
mips_10
mips_13
mips_13_03
mips_13_03_01
mips_13_03_05
mips_13_07
mips_20
mips_40_27
mips_40_27_99
mips_63
mips_63_01
mips_98
at_At1g34340 - no entry null
at_At1g47480 - mips_01_06_04 "unknown protein"
mips_01_06_07
mips_11_10
mips_11_10_09
at_At1g49640 - mips_01_06_04 "hypothetical protein"
at_At1g49650 - mips_01_06 "unknown protein"
mips_01_06_04
at_At1g49660 - no entry null
at_At1g52700 - no entry null
at_At1g54570 - no entry null
at_At1g54990 - no entry null
at_At1g68620 - mips_01_06_04 "putative carboxylesterase"
mips_01_06_07
at_At1g73480 - mips_01_06_04 "putative lysophospholipase (At1g73480)"
mips_02_25
at_At1g74290 - mips_02_11 "unknown protein"
mips_02_11_05
mips_11_07
mips_11_07_01
at_At2g03550 - mips_01_06_04 "putative esterase"
mips_11_10
mips_11_10_09
at_At2g18360 - mips_02_11 "unknown protein"
mips_02_11_05
mips_11_07
mips_11_07_01
at_At2g30550 - no entry null
at_At2g31690 - no entry null
at_At2g39410 - mips_01_06_04 "putative phospholipase"
mips_02_25
at_At2g39420 - mips_01_06_04 "phospholipase like protein"
mips_02_25
at_At2g44810 - no entry null
at_At2g45610 - mips_01_06_04 "unknown protein"
mips_11_10
mips_11_10_09
at_At2g47630 - mips_01 "putative phospholipase"
mips_02
mips_01_06
mips_01_06_04
mips_02_25
mips_11
mips_11_01
mips_13
mips_13_11
at_At3g26820 - no entry null
at_At3g26840 - no entry null
at_At3g50790 - no entry null
at_At3g63010 - mips_01_06_04 "putative protein"
mips_11_10
mips_11_10_09
at_At4g22300 - mips_01_06_07 "putative protein"
mips_01_06_10
mips_48
at_At4g25770 - mips_01_06_04 "putative protein"
at_At4g31020 - mips_01_06 "putative protein"
mips_01_06_04
mips_11_01
mips_13_11
at_At5g11650 - mips_02 "lysophospholipase - like protein"
mips_01_05_01
mips_01_06
mips_01_06_04
mips_02_25
mips_11_01
mips_13_11
at_At5g15860 - mips_01_25 "Carboxylesterase-like protein"
mips_01_25_07
mips_13_07
mips_13_11
at_At5g16080 - mips_01_06_04 "unknown protein"
mips_01_06_07
mips_11_10
mips_11_10_09
at_At5g19050 - no entry null
at_At5g19290 - mips_01_06_04 "phospholipase - like protein"
mips_02_25
at_At5g19630 - no entry null
at_At5g23530 - mips_01_06_04 "unknown protein"
mips_01_06_07
at_At5g43860 - no entry null
at_At5g49950 - no entry null
at_At5g51180 - mips_01_06_04 "unknown protein"
at_At5g53050 - no entry null
------------------
Rule 248
scop_b.82 <= 0.0039
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
seq_dc2_ratio > 0.45
-> class mips_01_05_01_01 "C-compound, carbohydrate catabolism"
Evaluation on training data (2913 items):
at_At1g10460 mips_01_05_01_01_03 "germin-like protein (GLP7)"
mips_02_13
at_At1g18970 mips_01_05_01_01_03 "germin-like protein (GLP4)"
mips_02_13
at_At1g67070 mips_01_05_01_01_01 "phosphomannose isomerase (din9)"
at_At1g72610 mips_01_05_01_01 "germin-like protein"
mips_01_05_01_01_03
at_At5g38930 mips_01_05_01 "germin - like protein"
mips_01_05_01_01
mips_01_05_01_01_03
mips_30_01
at_At5g38950 mips_01_05_01_01_03 "germin - like protein"
at_At5g39100 mips_01_05_01_01_03 "germin-like protein (GLP6)"
mips_02_13
mips_30_01
at_At5g39110 mips_01_05_01_01_03 "germin -like protein"
mips_02_13
at_At5g39150 mips_01_05_01_01_03 "germin - like protein"
mips_02_13
at_At5g61750 mips_01_05 "germin-like protein - like"
mips_01_05_01_01
mips_01_05_01_01_03
mips_02_13
mips_11_05
mips_30
Training Accuracy: 10/10 (100.00%)
Training Frequency class 'mips_01_05_01_01': 349/2913 (11.98%)
Evaluation on validation data (1468 items):
at_At1g09560 mips_02 "germin-like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_03
mips_02_13
mips_11_01
mips_11_05
mips_30_01
at_At1g18980 mips_01_05_01_01 "unknown protein"
mips_01_05_01_01_03
mips_02_13
at_At3g62020 mips_01_05_01_01_03 "germin-like protein (GLP10)"
mips_02_13
at_At5g39120 mips_01_05_01_01_03 "germin - like protein"
mips_02_13
mips_30_01
at_At5g39130 mips_01_05_01_01_03 "germin - like protein"
mips_02_13
Validation Accuracy: 5/5 (100.00%)
Validation Frequency class 'mips_01_05_01_01': 154/1468 (10.49%)
Evaluation on propertest data (2441 items):
at_At2g26400 - mips_01_01 "unknown protein"
mips_01_01_01
mips_01_01_01_07
mips_01_01_01_07_04
at_At4g14630 mips_02 "germin precursor oxalate oxidase"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_03
mips_02_13
mips_11
mips_11_01
mips_11_05
mips_30
mips_30_01
at_At5g26700 mips_01 "nectarin - like protein"
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_03
mips_02_13
mips_11
mips_11_01
mips_11_05
mips_30
mips_30_01
mips_98
at_At5g38910 mips_02 "germin - like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_03
mips_02_13
mips_11
mips_11_01
mips_11_05
mips_30
mips_30_01
at_At5g38940 mips_01_05_01_01_03 "germin - like protein"
mips_30_01
at_At5g38960 mips_01_05_01_01_03 "germin - like protein"
mips_02_13
mips_30_01
at_At5g39190 mips_02 "germin-like protein (GLP2a) copy2"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_03
mips_02_13
mips_11_01
mips_11_05
mips_30_01
at_At5g43850 - mips_01_01_01_07 "putative protein"
mips_01_01_01_07_04
Propertest Accuracy: 6/8 (75.00%)
Propertest Frequency class 'mips_01_05_01_01': 241/2441 (9.87%)
New (unknown) data (1468 items):
at_At1g02880 - mips_01_07 "hypothetical protein"
at_At2g44750 - mips_01_07 "putative thiamin pyrophosphokinase"
mips_01_07_01
------------------
Rule 466
ss(_1,_3,a,_2),alpha_dist(_1,45.54-101.0),c_len(_2,1.0-3.0),a_len(_3,15.0-30.0) = 0
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 0
profscan(_orf_0,_profscan_id_1,_ipr_2),hmmpfam(_orf_0,_hmmpfam_id_3,_ipr_2) = 0
ss(_1,_3,c,_2),c_len(_3,1.0-3.0),ss(_1,_2,b,_4),notequal(_4,_3),notequal(_4,_2),alpha_dist(_1,0.0-13.03) = 0
eval(_1,_2,9.0e-25-8.0e-10),keyword(_2,transcription_regulation),db_ref(_2,hssp) = 0
eval(_1,_2,9.0e-25-8.0e-10),keyword(_2,zinc),db_ref(_2,prosite) = 0
eval(_1,_2,9.0e-25-8.0e-10),classification(_2,mollicutes),keyword(_2,hypothetical_protein) = 0
eval(_1,_2,9.0e-25-8.0e-10),sq_len(_2,15.0-349.0),keyword(_2,multigene_family) = 1
eval(_1,_2,0.0-9.0e-25),keyword(_2,multigene_family),db_ref(_2,flybase) = 0
scop_c.87 > 1.6e-23
eval(_1,_2,9.0e-25-8.0e-10),keyword(_2,transmembrane),desc(_2,precursor) = 0
eval(_1,_2,9.0e-25-8.0e-10),keyword(_2,transmembrane),db_ref(_2,tigrfams) = 0
eval(_1,_2,9.0e-25-8.0e-10),classification(_2,viridiplantae),db_ref(_2,smart) = 0
eval(_1,_2,9.0e-25-8.0e-10),classification(_2,rodentia),desc(_2,subunit) = 0
eval(_1,_2,0.0-9.0e-25),keyword(_2,transmembrane),desc(_2,precursor) = 0
eval(_1,_2,0.0-9.0e-25),classification(_2,rodentia),keyword(_2,signal) = 0
-> class mips_01_05_01_01 "C-compound, carbohydrate catabolism"
Evaluation on training data (2913 items):
at_At1g01090 mips_01 "pyruvate dehydrogenase E1 alpha subunit"
mips_01_01
mips_01_01_10
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_06
mips_06_10
mips_40
mips_40_16
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_63
mips_63_01
mips_63_11
mips_63_13
mips_63_13_99
mips_63_21
mips_63_21_11
mips_63_21_13
mips_67
mips_67_15
at_At1g03630 mips_01_01 "protochlorophyllide reductase like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
mips_30_26
mips_30_26_03
at_At1g07440 mips_01_01_01_11 "tropinone reductase-I, putative"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_40_19
at_At1g07450 mips_01_01_01_11 "tropinone reductase-I, putative"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_19
at_At1g09340 mips_01_05_01_01_01 "putative RNA-binding protein"
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_99
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g12780 - mips_01_05_01_03 "uridine diphosphate glucose epimerase"
mips_01_05_01_03_01
mips_02_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g24470 mips_01_01_01_11 "putative b-keto acyl reductase"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At1g25460 mips_01_05_01_01_01 "hypothetical protein"
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g30620 mips_01_03 "UDP-galactose 4-epimerase-like protein"
mips_02
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_99
mips_02_01
at_At1g32100 mips_01_05_01_01_01 "pinoresinol-lariciresinol reductase like protein"
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_11_99
at_At1g36580 mips_01_01 "hypothetical protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
at_At1g47290 mips_01 "3-beta-hydroxysteroid dehydrogenase, putative"
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_06
mips_01_06_01
mips_01_06_01_07
mips_01_06_01_07_11
mips_02_01
mips_40_03
mips_40_07
mips_40_16
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_05
at_At1g54870 mips_01 "putative protein (At1g54870)"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_02_07
mips_20
mips_40_16
at_At1g59900 mips_01_01 "unknown protein"
mips_01_01_01
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_20
mips_01_20_03
mips_02_08
mips_14
mips_14_04
mips_25
mips_25_05
mips_40_03
mips_40_16
at_At1g62610 mips_01_01 "similar to glucose 1-dehydrogenase (AB000617); similar to EST gb|T88100"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20_17
mips_01_20_50
at_At1g63180 mips_01_03 "uridine diphosphate glucose epimerase, putative"
mips_02
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_02_01
mips_30_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g63380 mips_01_01_01_11 "reductase, putative"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
at_At1g64440 mips_01_03 "UDP-galactose 4-epimerase, putative"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_02_01
mips_30_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g71695 - mips_01_20_35 "peroxidase ATP4a"
mips_01_20_35_01
at_At1g73250 mips_01_05_01_01_01 "GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase (GER1)"
mips_01_05_01_03_01
mips_02_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g75280 mips_01_03 "putative NADPH oxidoreductase"
mips_01_05_01_01_01
mips_01_05_99
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_11_99
at_At1g80820 mips_01_03 "cinnamoyl CoA reductase like protein"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_01
mips_30_34
mips_30_34_09
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g02400 mips_01_03 "putative cinnamoyl-CoA reductase"
mips_02
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_30_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g20360 - mips_01_06_01_07 "putative NADH-ubiquinone oxireductase"
mips_01_06_01_07_11
mips_02_11_05
mips_30_16
at_At2g21280 mips_01_03 "unknown protein"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_02_01
mips_03_03_03
mips_30_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g29170 mips_01_01_01_11 "putative tropinone reductase"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_19
at_At2g29300 mips_01_01_01_11 "putative tropinone reductase"
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_19
at_At2g29310 mips_01_01_10_05 "putative tropinone reductase"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_19
at_At2g29320 mips_01_01_01_11 "tropinone reductase like protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
at_At2g29360 mips_01_01 "putative tropinone reductase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
mips_14_10
mips_14_10_02
mips_40_19
mips_67_15
at_At2g33600 mips_01_03 "putative cinnamoyl-CoA reductase"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_01
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g34460 - mips_01_05_01_03_01 "unknown protein"
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g37540 mips_01_01_01_11 "putative oxidoreductase"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_14_01_01
mips_14_05
at_At2g43420 mips_01_05_01_01_01 "putative sterol dehydrogenase"
mips_01_06_01_07
mips_01_06_01_07_11
at_At2g47120 mips_01_01_01_11 "putative alcohol dehydrogenase"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At2g47130 mips_01_01 "putative alcohol dehydrogenase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_20
mips_40_16
at_At2g47140 mips_01_01_01 "alcohol dehydrogenase like protein"
mips_01_01_01_11
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
at_At2g47150 mips_01_01 "putative alcohol dehydrogenase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
mips_40_19
mips_67_15
at_At3g12800 mips_01_01_10_05 "hypothetical protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20_17
mips_01_20_50
mips_02_07
at_At3g14790 - mips_01_05_01_03_01 "dTDP-glucose 4,6-dehydratase, putative"
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At3g23820 mips_01_05_01_01_01 "NAD dependent epimerase, putative"
mips_01_05_01_03_02
mips_01_05_99
mips_02_01
at_At3g26770 mips_01_01_01_11 "short chain alcohol dehydrogenase like protein"
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_02_07
at_At3g46170 mips_01_01 "dehydrogenase -like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
at_At3g46440 mips_01_05_01_01_01 "dTDP-glucose 4-6-dehydratases-like protein"
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At3g47350 mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
at_At3g47360 mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_20
mips_40_16
at_At3g51160 - mips_01_05_01_03_02 "GDP-D-mannose-4,6-dehydratase (MUR1)"
mips_01_05_99
mips_02_01
at_At3g51680 mips_01_01_01_11 "short-chain alcohol dehydrogenase-like protein"
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At3g55290 mips_01_01_01_11 "oxidoreductase like protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
at_At3g55590 - mips_01_05_01_03_02 "mannose-1-phosphate guanylyltransferase-like protein"
mips_01_07_01
mips_02_19
at_At3g59710 mips_01_01_01_11 "putative protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_05
mips_01_20_50
at_At4g00110 mips_01_05_01_01_01 "putative nucleotide sugar epimerase"
mips_01_05_99
mips_02_01
at_At4g00560 mips_01_05_01_01_01 "putative dTDP-6-deoxy-L-mannose-dehydrogenase"
mips_01_05_01_03_01
mips_02_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At4g05530 mips_01_01_10_05 "unknown protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_40_19
at_At4g09750 mips_01_05_01_01_09 "putative protein"
mips_01_05_01_01_11
mips_01_20_50
mips_14_01_01
mips_14_05
at_At4g10020 mips_01_01 "putative oxidoreductase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_20
mips_40_16
at_At4g13180 mips_01_01_10_05 "short-chain alcohol dehydrogenase like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_02_07
at_At4g13250 mips_01_01_01_11 "unknown protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At4g17690 - mips_01_20_35 "peroxidase like protein"
mips_01_20_35_01
mips_11_07
at_At4g20460 mips_01_05_01_01_01 "UDP-glucose 4-epimerase - like protein"
mips_01_05_01_03_01
mips_02_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At4g23420 mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
mips_67_15
at_At4g23920 mips_01_03 "UDPglucose 4-epimerase - like protein"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_02_01
mips_30_01
at_At4g26390 mips_02 "pyruvate kinase like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_02_01
mips_40_03
at_At4g30470 mips_01_05_01 "cinnamoyl-CoA reductase - like protein"
mips_01_05_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_01_07
mips_01_07_01
mips_01_07_99
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_30_01
mips_40_10_03
at_At4g33030 mips_01_05_01_01 "sulfolipid biosynthesis protein SQD1"
mips_01_05_01_01_01
mips_01_06_99
mips_02_01
mips_06_13_04
mips_30_02
at_At4g33360 - mips_01_06_01 "putative dihydrokaempferol 4-reductase"
mips_01_06_01_07
mips_01_06_01_07_11
mips_01_20_35
mips_01_20_35_01
mips_30_01
mips_40_07
mips_40_10_03
at_At4g34540 mips_01_03 "isoflavone reductase - like protein"
mips_02
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_06
mips_01_06_01
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_11_99
mips_30_01
at_At4g35420 mips_01_05_01_01_01 "putative protein"
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_40_10_03
at_At4g39230 mips_01_05_01_01_01 "NAD(P)H oxidoreductase, isoflavone reductase - like protein"
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
mips_02_01
mips_11_99
at_At5g02540 mips_01_01_01_11 "putative protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_14_01_01
mips_14_05
at_At5g10050 mips_01_01_01_11 "putative protein"
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
at_At5g14700 mips_01_01_01_11 "cinnamoyl CoA reductase - like protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_02
mips_01_05_01_03_09
mips_01_07_01
mips_01_07_99
mips_01_20_35
mips_01_20_35_01
mips_01_20_50
at_At5g18210 mips_01_01 "Brn1-like protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_20
mips_40_16
at_At5g19440 mips_01_03 "cinnamyl-alcohol dehydrogenase - like protein"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_07
mips_01_07_99
mips_01_20_35
mips_01_20_35_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At5g28840 mips_01_05_01_01 "GDP-mannose 3,5-epimerase"
mips_01_05_01_01_01
mips_02_01
mips_40_10_03
at_At5g38950 mips_01_05_01_01_03 "germin - like protein"
at_At5g47000 - mips_01_20_35 "peroxidase"
mips_01_20_35_01
at_At5g50130 mips_01_01 "ribitol dehydrogenase-like"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
mips_14_01
mips_14_01_01
mips_67_15
at_At5g50600 mips_01_01_01_11 "11-beta-hydroxysteroid dehydrogenase-like"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At5g50690 mips_01_01_01_11 "11-beta-hydroxysteroid dehydrogenase-like"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At5g50770 mips_01_01_01_11 "putative protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At5g51030 mips_01_01_01_11 "carbonyl reductase-like protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_19
at_At5g56350 mips_02 "pyruvate kinase"
mips_01_05_01_01
mips_02_01
at_At5g59290 mips_01_03 "dTDP-glucose 4-6-dehydratase - like protein"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At5g65750 mips_01_05 "2-oxoglutarate dehydrogenase, E1 component"
mips_01_05_01_01
mips_02_10
mips_14_04
mips_25_05
Training Accuracy: 75/85 (88.24%)
Training Frequency class 'mips_01_05_01_01': 349/2913 (11.98%)
Evaluation on validation data (1468 items):
at_At1g02000 mips_01_05_01_01_01 "nucleotide sugar epimerase, putative"
mips_01_05_01_03_02
mips_01_05_99
mips_02_01
at_At1g08200 mips_01_05_01_01_01 "unknown protein"
mips_01_05_01_03_01
mips_02_01
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g15950 - mips_01_05_01_03_01 "unknown protein"
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g19580 - mips_01_02 "unknown protein"
mips_01_20_01
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_13_07
mips_63_06
mips_67_04_01
mips_67_04_01_01
mips_67_04_01_01_01
at_At1g24360 mips_01_01_01_11 "putative 3-oxoacyl [acyl-carrier protein] reductase"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
at_At1g52340 mips_01_01_01_11 "short chain alcohol dehydrogenase, putative"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At1g53500 - mips_01_03 "dTDP-D-glucose 4,6-dehydratase, putative"
mips_01_05_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g63000 - mips_01_05_01_03_02 "unknown protein"
mips_01_05_99
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_40_10_03
at_At1g75290 mips_01_03 "NADPH oxidoreductase, putative"
mips_02
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_11_99
mips_30_01
at_At1g75300 mips_01_03 "NADPH oxidoreductase, putative"
mips_01_05_01_01_01
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_11_99
mips_30_01
at_At2g24190 - mips_01_20_05 "putative carbonyl reductase"
mips_01_20_05_09
mips_11_07
mips_11_07_07
at_At2g26260 mips_01_05_01_01_01 "3-beta-hydroxysteroid dehydrogenase"
mips_01_06_01_07
mips_01_06_01_07_11
mips_02_01
mips_47_03_15
mips_47_03_15_05
at_At2g28760 mips_01_03 "putative nucleotide-sugar dehydratase"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_02_01
mips_30_01
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g29340 mips_01_01_10_05 "tropinone reductase like protein"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_17
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_40_19
mips_67_15
at_At2g29370 mips_01_01_01_11 "putative tropinone reductase"
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_40_19
at_At2g33630 mips_01_05 "putative steroid dehydrogenase"
mips_01_05_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_01_06_01_07
mips_01_06_01_07_11
mips_02_01
mips_14_04
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
at_At2g34850 mips_01_03 "putative UDP-galactose-4-epimerase"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_02_01
mips_30_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g39770 - mips_01_05_01_03_02 "GDP-mannose pyrophosphorylase"
mips_02_19
at_At2g45400 mips_01_05_01_01 "putative flavonol reductase"
mips_01_05_01_03_01
mips_01_05_99
mips_01_20_35
mips_01_20_35_01
mips_40_10
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At3g11050 - mips_11_01_01 "putative ferritin subunit precursor"
mips_11_07
mips_11_07_07
mips_13_01
mips_13_01_01
mips_13_01_01_01
mips_14_01
mips_14_01_03
mips_14_01_03_01
mips_40_26
mips_40_26_03
mips_63_17
mips_63_17_09
mips_65
mips_67_04
at_At3g12290 - mips_01_01_01 "unknown protein"
mips_01_01_01_07
mips_01_01_01_11_15
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_05_08
mips_01_03_01
mips_01_03_04
mips_01_05
mips_01_07
mips_04_03
mips_04_03_06
mips_63_19
at_At3g26760 mips_01_01 "putative short chain alcohol dehydrogenase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
at_At3g29250 mips_01_01 "short-chain alcohol dehydrogenase, putative"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
at_At3g44540 - mips_01_01_01 "acyl CoA reductase - protein"
mips_01_06
mips_01_06_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_25
mips_63_13
mips_63_13_03
mips_63_21
mips_63_21_99
at_At3g44560 - mips_01_01 "acyl CoA reductase -like protein"
mips_01_01_01
mips_01_05_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_01_06
mips_01_06_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
at_At3g55310 mips_01_01_01_11 "beta-ketoacyl-ACP reductase - like protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
at_At3g55810 mips_02 "pyruvate kinase - like protein"
mips_01_05_01
mips_01_05_01_01
mips_02_01
at_At4g03140 mips_01_01 "putative alcohol dehydrogenase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_20
mips_40_16
at_At4g10960 mips_01_03 "UDP-galactose 4-epimerase - like protein"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_02_01
mips_30_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At4g11410 mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
mips_14_01
mips_14_01_01
mips_14_05
mips_67_15
at_At4g12250 mips_01_03 "nucleotide sugar epimerase -like protein"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_01_05_99
mips_02_01
at_At4g15560 - mips_01_06_01_07 "DEF (CLA1) protein"
mips_02_07
mips_02_07_03
mips_02_19
mips_02_30
mips_63_17_07
mips_63_21
mips_63_21_11
at_At4g20760 mips_01_01 "cell-cell signaling protein csgA - like"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_06_01_07
mips_01_06_01_07_11
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
at_At4g23430 mips_01_01_01_11 "putative protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_14_01_01
mips_14_05
at_At4g27440 mips_01_01_01 "protochlorophyllide reductase precursor"
mips_01_01_01_11
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_26
mips_30_26_03
at_At4g28940 - mips_01_01_01 "putative protein"
mips_01_01_01_01
mips_01_01_01_01_02
mips_01_03_01
mips_65
at_At4g32320 - mips_01_01_99 "L-ascorbate peroxidase - like protein"
mips_01_20_35
mips_01_20_35_01
mips_11_07_03
mips_40_26
mips_40_26_03
at_At4g33790 - mips_01_06_01_05 "male sterility 2-like protein"
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_25
mips_63_13
mips_63_13_03
mips_63_21
mips_63_21_99
at_At5g02240 mips_01_05_01_01_01 "unknown protein"
mips_01_06_01_07
mips_01_06_01_07_11
mips_01_20_35
mips_01_20_35_01
mips_02_01
at_At5g04900 mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
at_At5g06060 mips_01_01_10_05 "short chain alcohol dehydrogenase-like"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_05
mips_01_20_17
mips_01_20_50
mips_02_07
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
at_At5g19200 mips_01_01_01_11 "FVT1 - like protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_40_27
at_At5g42800 mips_01_05_01_01_01 "dihydroflavonol 4-reductase"
mips_01_05_01_03_01
mips_01_20_35
mips_01_20_35_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At5g50700 mips_01_01_01_11 "11-beta-hydroxysteroid dehydrogenase-like"
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At5g53090 mips_01_01_01 "protochlorophyllide reductase; oxidoreductase required for shoot apex development"
mips_01_01_01_11
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
Validation Accuracy: 31/45 (68.89%)
Validation Frequency class 'mips_01_05_01_01': 154/1468 (10.49%)
Evaluation on propertest data (2441 items):
at_At1g01800 - mips_01_20_05 "putative short-chain dehydrogenase"
mips_01_20_05_09
mips_11_07
mips_11_07_07
at_At1g09480 mips_01_05_01_01 "putative cinnamyl alcohol dehydrogenase"
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_07_01
mips_01_07_99
mips_01_20_35
mips_01_20_35_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g09490 - mips_01_05_01_03_01 "putative cinnamyl alcohol dehydrogenase"
mips_01_05_01_03_02
mips_01_07_01
mips_01_07_99
mips_01_20_35
mips_01_20_35_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g09500 mips_01_03 "putative cinnamyl alcohol dehydrogenase"
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_30_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g09510 - mips_01_03 "putative cinnamyl alcohol dehydrogenase"
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_99
mips_01_07
mips_01_07_01
mips_01_20_35
mips_01_20_35_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g10310 mips_01_01_01_11 "unknown protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_40_19
at_At1g21400 - mips_01_01_01 "branched-chain alpha keto-acid dehydrogenase E1 alpha subunit"
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
mips_06_10
mips_62_01_07
mips_62_02
mips_62_02_01
mips_63_11
mips_63_13
mips_63_13_99
mips_63_21
mips_63_21_11
mips_63_21_13
mips_67_15
at_At1g32220 mips_01_05_01_01_01 "unknown protein"
mips_02_01
at_At1g50450 - mips_01_05_01_03_02 "unknown protein"
mips_01_06_01_07
mips_01_06_01_07_11
mips_01_20_35
mips_01_20_35_01
mips_30_34
at_At1g53240 - mips_02_01 "similar to mitochondrial NAD-dependent malate dehydrogenase"
mips_02_16
mips_02_16_03
mips_40_26
mips_40_26_03
mips_45
mips_45_03
mips_45_03_12
mips_47_03_15
mips_47_03_15_07
mips_63_99
at_At1g61720 mips_01 "putative protein"
mips_01_03
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_30
mips_30_01
mips_40_03
mips_63
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
mips_98
at_At1g64590 mips_01_01_10_05 "oxidoreductase, putative"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_14_01_01
mips_14_05
at_At1g66800 mips_01 "hypothetical protein"
mips_01_03
mips_01_05
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_20
mips_01_20_35
mips_01_20_35_01
mips_04
mips_04_05_01_04
mips_30
mips_40
mips_40_10
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
mips_98
at_At1g67730 mips_01_01_01_11 "b-keto acyl reductase (glossy8)"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_40_19
at_At1g68540 mips_01_05_01_01 "putative reductase"
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g76470 - mips_01_05_01_03_01 "putative cinnamoyl-CoA reductase"
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At1g78570 mips_01_03 "Similar to dTDP-D-glucose 4,6-dehydratase"
mips_02
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_05_99
mips_02_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g04650 - mips_02 "putative GDP-mannose pyrophosphorylase"
mips_01_05
mips_01_05_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_01_07
mips_01_07_01
mips_02_19
mips_30
mips_30_01
mips_40_03
at_At2g05990 mips_01_01_01 "enoyl-ACP reductase (ENR1)"
mips_01_01_01_11
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
at_At2g07640 mips_01_01_01 "unknown protein"
mips_01_01_01_11
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06_01
mips_01_06_01_07
mips_01_06_01_07_11
mips_01_07
mips_01_20_17
mips_01_20_50
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
at_At2g16570 - mips_01_01_01_01 "amidophosphoribosyltransferase"
mips_01_01_01_01_02
mips_01_01_10_01
mips_01_03_01
mips_01_03_01_03
mips_14_04
mips_63_19
at_At2g23910 - mips_01_05_01_03_02 "cinnamoyl CoA reductase like protein"
mips_01_07_99
mips_01_20_35
mips_01_20_35_01
mips_01_20_35_01_05
at_At2g27860 mips_01_05_01_01_01 "putative dTDP-glucose 4-6-dehydratase"
mips_01_05_01_03_01
mips_02_01
mips_40_10_03
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g29290 mips_01_01_01_11 "putative tropinone reductase"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_02_07
mips_40_19
at_At2g29330 mips_01 "putative tropinone reductase"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_02_07
mips_14
mips_14_04
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_20
mips_40_03
mips_40_19
mips_67
mips_67_15
mips_98
at_At2g29350 mips_01_01 "putative tropinone reductase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_02
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_02_07
mips_20
mips_40_19
mips_67_15
at_At2g30670 mips_01_01 "putative tropinone reductase"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_06
mips_01_06_01
mips_01_06_01_05
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_02_07
mips_20
mips_40_03
mips_40_19
mips_67
mips_67_15
at_At2g33590 - mips_01_05_01_03_01 "putative cinnamoyl-CoA reductase"
mips_01_05_01_03_02
mips_01_20_35_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At2g37660 mips_01_01 "unknown protein"
mips_01_01_01
mips_01_03
mips_01_05_01_01_01
mips_02_01
mips_30_01
at_At2g45290 - mips_01_06_01_07 "putative transketolase precursor"
mips_02_07
mips_02_07_03
mips_40_26
mips_40_26_03
mips_63_21
mips_63_21_11
at_At2g47650 mips_01_03 "putative nucleotide-sugar dehydratase"
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_99
mips_02_01
mips_40_16
at_At3g06930 - mips_04_05_01_04_99 "putative arginine methyltransferase"
mips_06_07_09
mips_06_07_99
mips_10_01_99
mips_11_01_99
mips_14_01_01
mips_30_10_03
mips_48
mips_62_01_01
mips_62_01_07
at_At3g11980 - mips_01_01 "hypothetical protein"
mips_01_01_01
mips_01_06_01
mips_01_06_01_05
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_25
mips_63_13
mips_63_13_03
mips_63_21
mips_63_21_99
at_At3g21500 - mips_01_05 "1-D-deoxyxylulose 5-phosphate synthase, putative"
mips_01_06_01_07
mips_02_07
mips_02_19
mips_02_30
mips_25_05
mips_63_17_07
mips_63_21
mips_63_21_11
at_At3g29260 mips_01_01_10_05 "short-chain alcohol dehydrogenase, putative"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20_17
mips_01_20_50
mips_02_07
at_At3g42960 mips_01_01_01_11 "alcohol dehydrogenase (ATA1)"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
at_At3g44550 - mips_01_01 "acyl CoA reductase -like protein"
mips_01_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_01_06_01
at_At3g49160 mips_02 "pyruvate kinase -like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
at_At3g50560 mips_01 "unknown protein"
mips_01_01
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20
mips_01_20_17
mips_01_20_50
mips_20
mips_40_19
mips_67
mips_67_15
at_At3g53520 mips_01_05_01_01 "UDP-glucuronic acid decarboxylase (UXS1)"
mips_01_05_99
at_At3g55410 mips_01_05_01_01_01 "2-oxoglutarate dehydrogenase, E1 subunit - like protein"
mips_02_10
at_At3g55650 mips_01_05 "pyruvate kinase - like protein"
mips_01_05_01_01
mips_02_01
at_At3g56700 - mips_01_06_01_05 "putative protein"
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_25
mips_63_13
mips_63_13_03
mips_63_21
mips_63_21_99
at_At3g61220 - mips_01_20_05 "putative protein"
mips_01_20_05_09
mips_11_07_07
at_At3g62830 mips_01_05_01_01_01 "dTDP-glucose 4-6-dehydratase homolog D18"
mips_01_05_99
mips_02_01
mips_40_10_03
at_At4g00600 - mips_01_01_01_07 "putative tetrahydrofolate synthase"
mips_01_01_01_11
mips_01_01_01_11_15
mips_01_01_10
mips_01_01_10_03
mips_01_01_10_05
mips_01_01_10_05_08
mips_01_03_01
mips_01_03_04
mips_01_07_01
mips_04_03
mips_04_03_06
at_At4g12600 - mips_04_05_05_01 "Ribosomal protein L7Ae -like"
mips_40_10_07
at_At4g13660 - mips_01_20_35 "isoflavone reductase-like protein"
mips_01_20_35_01
mips_11_99
at_At4g22380 - mips_04_05_05_01 "Ribosomal protein L7Ae - like (fragment)"
mips_40_10_07
at_At4g24050 mips_01_05_01_01_09 "unknown protein"
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_20_50
mips_14_01_01
mips_14_05
at_At4g27250 - mips_01_05_01_03_02 "putative protein"
mips_01_07_01
mips_01_07_99
mips_01_20_35
mips_01_20_35_01
at_At4g27760 mips_01_01_01_11 "forever young gene (FEY) (fragment)"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_17
mips_01_20_50
at_At4g30440 mips_01_05_01_01_01 "nucleotide sugar epimerase-like protein"
mips_01_05_01_03_02
mips_01_05_99
mips_02_01
at_At4g30570 - mips_01_05_01_03 "GDP-mannose pyrophosphorylase like protein"
mips_01_05_01_03_02
mips_01_07
mips_01_07_01
mips_05_04
mips_30_01
at_At4g34740 - mips_01_01_01_01 "amidophosphoribosyltransferase 2 precursor"
mips_01_01_01_01_02
mips_01_01_10_01
mips_01_03_01
mips_01_03_01_03
at_At4g35250 mips_01_05_01_01_01 "putative protein"
mips_02_01
mips_40_26
mips_40_26_03
at_At4g38880 - mips_01_01_01_01 "amidophosphoribosyltransferase - like protein"
mips_01_01_01_01_02
mips_01_01_10
mips_01_01_10_01
mips_01_03_01
mips_01_03_01_03
at_At5g01230 - mips_03 "cell division - like protein"
mips_03_03
mips_03_03_01
mips_03_03_01_03
mips_03_99
mips_04
mips_04_01
mips_04_01_04
mips_05_99
mips_40_10
mips_40_10_07
mips_98
at_At5g08190 - mips_04_05_01_01 "DR1-like protein"
mips_04_05_01_04_03
mips_62_01_07
mips_62_02_01_02
mips_62_02_01_02_99
at_At5g08570 mips_02 "pyruvate kinase"
mips_01_05_01
mips_01_05_01_01
mips_02_01
at_At5g09300 - mips_01_01 "branched-chain alpha keto-acid dehydrogenase E1 alpha subunit-like protein"
mips_01_01_01
mips_01_01_10
mips_01_01_10_04
mips_01_01_10_04_02
mips_01_01_10_04_03
mips_01_01_10_04_04
mips_06_10
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_63_11
mips_63_13
mips_63_13_99
mips_63_21
mips_63_21_11
mips_63_21_13
mips_67_15
at_At5g10730 - mips_01_05_01_03_02 "unknown protein"
mips_01_06_01_07
mips_01_06_01_07_11
mips_47_03_15
mips_47_03_15_05
at_At5g11380 - mips_02 "1-D-deoxyxylulose 5-phosphate synthase - like protein"
mips_01_05
mips_01_05_01
mips_01_06
mips_01_06_01
mips_01_06_01_07
mips_02_07
mips_02_07_03
mips_02_19
mips_02_30
mips_30
mips_30_01
mips_40_03
mips_63_17
mips_63_17_07
mips_63_21
mips_63_21_11
at_At5g15940 mips_01_01_01_11 "putative protein"
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03_09
mips_01_06_01_05
mips_01_20_50
mips_40_19
at_At5g21060 - mips_01_01_01 "homoserine dehydrogenase-like protein"
mips_01_01_01_07
mips_01_01_01_07_03
mips_01_01_04
at_At5g22420 - mips_01_06_01_05 "acyl CoA reductase-like protein"
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_25
mips_63_13
mips_63_13_03
mips_63_21
mips_63_21_99
at_At5g22500 - mips_01_06_01_05 "male sterility 2-like protein (emb|CAA68191.1)"
mips_01_06_04
mips_01_06_07
mips_02_10
mips_02_25
mips_63_13
mips_63_13_03
mips_63_21
mips_63_21_99
at_At5g34780 mips_01_01_01 "3-methyl-2-oxobutanoate dehydrogenase-like protein"
mips_02
mips_01_05_01_01
mips_01_20
mips_01_20_03
mips_02_08
mips_40_16
at_At5g44480 mips_01_05_01_01 "putative protein"
mips_01_05_01_01_01
mips_01_05_01_03_01
mips_02_01
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At5g50590 mips_01_01 "11-beta-hydroxysteroid dehydrogenase-like"
mips_01_01_01
mips_01_01_01_11
mips_01_01_10
mips_01_01_10_05
mips_01_05_01_01_01
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_07
mips_01_20_17
mips_01_20_50
mips_02_07
mips_40_19
mips_67_15
at_At5g53100 mips_01_01_10_05 "protochlorophyllide reductase; oxidoreductase required for shoot apex development"
mips_01_05_01_01_09
mips_01_05_01_01_11
mips_01_05_01_03
mips_01_05_01_03_09
mips_01_20_17
mips_01_20_50
mips_14_01_01
mips_14_05
at_At5g54190 mips_01_05_01_01_01 "NADPH:protochlorophyllide oxidoreductase A (gb|AAC49043.1)"
mips_01_06_01_05
mips_02_07
mips_30_26
mips_30_26_03
at_At5g58490 mips_01_05_01_01 "cinnamoyl-CoA reductase - like protein"
mips_01_05_01_01_01
mips_01_05_01_03_01
mips_01_05_01_03_02
mips_01_20_35
mips_01_20_35_01
mips_02_01
mips_14_04_01
mips_14_04_01_01
mips_14_04_01_01_01
mips_30_34
mips_30_34_09
mips_63_21
mips_63_21_07
mips_63_21_99
mips_63_99
at_At5g61830 - mips_01_20_05 "carbonyl reductase - like protein"
mips_01_20_05_09
mips_11_07
mips_11_07_07
at_At5g66280 - mips_01_05_01_03 "GDP-D-mannose 4,6-dehydratase; GMD1 (gb|AAF07199.1)"
mips_01_05_01_03_02
mips_02_01
Propertest Accuracy: 39/75 (52.00%)
Propertest Frequency class 'mips_01_05_01_01': 241/2441 (9.87%)
New (unknown) data (1468 items):
at_At1g03020 - mips_01_03_07 "putative glutaredoxin"
at_At1g03850 - mips_01_03_07 "unknown protein (At1g03850)"
at_At1g04760 - mips_08_07 "synaptobrevin 7B, putative"
mips_40_08
mips_40_09
at_At1g06830 - mips_01_03 "glutaredoxin like protein"
mips_01_03_07
mips_02_11
mips_11_07
mips_67_15
at_At1g14550 - mips_11_07 "peroxidase, putative"
at_At1g15930 - mips_05 "unknown protein"
mips_05_01
mips_05_01_01
mips_05_04
mips_40_07
mips_63_03_03
at_At1g17890 - mips_02_01 "GDP-L-fucose synthetase like protein"
at_At1g19540 - mips_02_01 "2'-hydroxyisoflavone reductase, putative"
mips_11_99
at_At1g19550 - mips_20 "GSH-dependent dehydroascorbate reductase 1, putative"
mips_40_04
mips_40_10_05
mips_62
mips_62_02
mips_62_02_07
mips_67_01
mips_67_01_01
mips_67_01_05
mips_67_04
mips_67_04_07
mips_67_50
mips_67_50_25
at_At1g23910 - no entry null
at_At1g24110 - no entry null
at_At1g24180 - mips_01_20_03 "pyruvate dehydrogenase E1 alpha subunit"
mips_02_08
at_At1g26850 - no entry null
at_At1g28480 - mips_01_03_07 "putative protein"
at_At1g30870 - no entry null
at_At1g32440 - mips_02_01 "putative pyruvate kinase, plastid isozyme (At1g32440)"
at_At1g34330 - no entry null
at_At1g36240 - no entry null
at_At1g74800 - no entry null
at_At1g77370 - mips_01_03 "putative protein"
mips_01_03_07
mips_02_11
mips_11
mips_11_01
mips_67
mips_67_15
at_At1g80800 - mips_05_01 "ribosomal protein, putative"
mips_05_01_01
mips_40_07
mips_63_03_03
at_At2g03480 - no entry null
at_At2g18660 - mips_11_05 "unknown protein"
mips_11_05_05
mips_11_10
mips_11_10_07
mips_29
mips_29_99
mips_30_01
mips_40_01
at_At2g18980 - no entry null
at_At2g19080 - mips_08_04 "unknown protein"
mips_30_16
mips_67_11
at_At2g20270 - mips_01_03_07 "putative glutaredoxin"
at_At2g24800 - no entry null
at_At2g25340 - mips_06_04 "putative synaptobrevin"
mips_14_04
mips_25_05
mips_40_09
mips_67
at_At2g30540 - mips_01_03_07 "putative glutaredoxin"
at_At2g32060 - mips_05 "40S ribosomal protein S12"
mips_05_01
mips_05_01_01
mips_05_04
mips_14
mips_14_04
mips_25
mips_25_05
mips_40
mips_40_03
mips_40_07
mips_63
mips_63_03
mips_63_03_03
at_At2g33110 - mips_08_07 "synaptobrevin like protein"
mips_40_08
mips_40_09
at_At2g33120 - mips_08_07 "putative synaptobrevin"
mips_40_08
mips_40_09
at_At2g34060 - no entry null
at_At2g36580 - mips_02_01 "pyruvate kinase like protein"
at_At2g37130 - no entry null
at_At2g38270 - mips_02_13 "unknown protein"
mips_02_13_03
at_At2g38870 - mips_06_13 "protease inhibitor like protein"
at_At2g38900 - no entry null
at_At2g43200 - no entry null
at_At2g45310 - mips_01_05_99 "putative nucleotide sugar epimerase"
mips_02_01
at_At2g47870 - mips_01_03 "putative glutaredoxin"
mips_01_03_07
mips_02_11
mips_11_07
mips_67_15
at_At2g47880 - mips_01_03 "putative glutaredoxin"
mips_01_03_07
mips_02_11
mips_11_07
mips_67_15
at_At3g09640 - mips_01_01_99 "putative ascorbate peroxidase"
mips_11_07_03
at_At3g10200 - no entry null
at_At3g15660 - mips_01_03_07 "unknown protein"
mips_02_13
mips_02_13_03
at_At3g17070 - mips_11 "peroxidase, putative"
mips_11_05
mips_11_07
at_At3g18740 - mips_05_01 "60S ribosomal protein, putative"
mips_05_01_01
at_At3g24890 - mips_08_07 "synaptobrevin, putative"
mips_13_03
mips_13_03_01
mips_14_01
mips_14_01_03
mips_40_07
mips_40_08
mips_40_09
at_At3g25960 - mips_02_01 "putative pyruvate kinase"
at_At3g49960 - no entry null
at_At3g51210 - no entry null
at_At3g52990 - mips_02_01 "pyruvate kinase - like protein"
at_At3g54300 - mips_40_09 "synaptobrevin -like protein"
at_At3g58830 - no entry null
at_At3g61900 - no entry null
at_At3g62930 - mips_01_03_07 "glutaredoxin -like protein"
at_At3g62950 - mips_01_03_07 "glutaredoxin -like protein"
at_At3g62960 - mips_01_03 "glutaredoxin -like protein"
mips_01_03_07
mips_02_11
mips_11_07
mips_67_15
at_At4g00740 - no entry null
at_At4g00750 - no entry null
at_At4g08770 - no entry null
at_At4g15660 - mips_01_03_07 "glutaredoxin"
at_At4g15670 - mips_01_03_07 "glutaredoxin"
at_At4g15680 - mips_01 "glutaredoxin"
mips_01_03_07
mips_02_11
mips_67
mips_67_15
mips_98
at_At4g15690 - mips_01_03 "glutaredoxin"
mips_01_03_07
mips_02_11
mips_11_07
mips_67_15
at_At4g15700 - mips_01_03 "glutaredoxin homolog"
mips_02
mips_01_03_07
mips_02_11
mips_11_07
mips_67_15
at_At4g16030 - mips_05_01 "probable ribosomal protein"
mips_05_01_01
mips_63_03_03
at_At4g18810 - no entry null
at_At4g21470 - mips_01_07 "putative protein"
mips_01_07_01
mips_01_07_07
at_At4g25980 - no entry null
at_At4g27840 - mips_40_09 "putative protein"
at_At4g28730 - mips_01_03_07 "putative protein"
at_At4g30170 - no entry null
at_At4g31530 - no entry null
at_At4g31760 - mips_11_07 "peroxidase - like protein"
at_At4g33040 - mips_01_02_99 "unknown protein"
mips_01_03_07
at_At4g33150 - mips_01_01 "lysine-ketoglutarate reductase/saccharopine dehydrogenase (LKR/SDH)"
mips_01_01_01
at_At4g33420 - no entry null
at_At4g33870 - no entry null
at_At4g34840 - no entry null
at_At4g35000 - mips_01_01_99 "L-ascorbate peroxidase"
mips_11_07_03
at_At4g35970 - mips_01_01_99 "putative ascorbate peroxidase"
mips_11_07_03
mips_40_26
mips_40_26_03
at_At4g37520 - no entry null
at_At4g37530 - no entry null
at_At4g39880 - no entry null
at_At5g04070 - no entry null
at_At5g06470 - mips_01_03_07 "putative protein"
mips_02_13
mips_02_13_03
at_At5g11150 - mips_06_04 "putative protein"
mips_08
mips_08_07
mips_08_07_03
mips_13_03
mips_13_03_01
mips_40_02
mips_40_07
mips_40_08
mips_40_09
at_At5g11930 - mips_01_02 "glutaredoxin - like protein"
mips_01_02_99
mips_01_03_07
mips_02_13
mips_02_13_03
at_At5g13810 - mips_02 "unknown protein"
mips_02_11
mips_02_13
mips_02_13_03
mips_11
mips_11_07
mips_40
mips_40_16
mips_67
mips_67_15
mips_98
mips_99
at_At5g14070 - mips_01_03 "glutaredoxin-like protein"
mips_01_03_07
mips_02_11
mips_11_07
at_At5g15910 - no entry null
at_At5g17820 - no entry null
at_At5g18600 - mips_01_03_07 "glutaredoxin -like protein"
at_At5g19890 - no entry null
at_At5g20500 - mips_01_03_07 "glutaredoxin"
at_At5g22360 - mips_08_07 "synaptobrevin-like protein"
mips_40_08
mips_40_09
at_At5g22410 - mips_11_07 "peroxidase ATP14a homolog"
mips_11_07_99
at_At5g27400 - no entry null
at_At5g27820 - mips_05_01 "putative protein"
mips_05_01_01
mips_63_03_03
at_At5g39410 - no entry null
at_At5g39580 - mips_11 "peroxidase ATP24a"
mips_11_05
mips_11_07
mips_98
at_At5g40150 - mips_11_05 "peroxidase ATP26a"
at_At5g42180 - mips_11_05 "peroxidase (emb|CAA66960.1)"
mips_11_07
at_At5g43570 - no entry null
at_At5g43580 - no entry null
at_At5g51890 - mips_11_05 "peroxidase"
mips_11_07
at_At5g52270 - mips_08_07 "putative protein"
mips_40_08
mips_40_09
at_At5g52920 - mips_02_01 "pyruvate kinase"
at_At5g52990 - mips_08_07 "putative protein"
mips_40_08
mips_40_09
at_At5g54400 - no entry null
at_At5g55140 - no entry null
at_At5g58060 - mips_08_07_03 "ATGP1"
at_At5g58400 - no entry null
at_At5g63030 - mips_01_03_07 "glutaredoxin-like protein"
at_At5g64110 - mips_11_07 "peroxidase ATP3a homolog"
mips_11_07_99
at_At5g64120 - mips_11_07_99 "peroxidase (emb|CAA67551.1)"
at_At5g65400 - mips_01_01 "putative protein"
mips_01_01_01
mips_01_03
mips_01_03_01
mips_01_03_04
mips_01_07
mips_01_07_01
at_At5g67400 - no entry null
------------------
Rule 255
eval(_1,_2,0.0-9.0e-25),keyword(_2,glycoprotein),db_ref(_2,hssp) = 1
scop_c.1.8 <= 0.016
-> class mips_01_05_01_01 "C-compound, carbohydrate catabolism"
Evaluation on training data (2913 items):
at_At1g03310 mips_01_05_01_01_01 "putative isoamylase"
mips_02_19
at_At1g05590 mips_01_05_01_01_01 "hypothetical protein"
mips_01_06_04
mips_40_25
at_At1g26560 mips_01_05_01_01_02 "beta-glucosidase like protein"
mips_01_20_01
mips_01_20_01_07
at_At1g33220 mips_01_05 "beta-1,3-glucanase, putative"
mips_01_05_01_01
mips_11_05
mips_11_05_03
mips_25_03
mips_30
mips_98
at_At1g51470 mips_01_05 "myrosinase precursor, putative"
mips_01_05_01
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At1g52400 mips_01_05_01 "beta-glucosidase, putative"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At1g60090 - mips_01_20_01 "hypothetical protein"
mips_01_20_01_07
at_At1g61810 mips_01_05_01_01_02 "hypothetical protein"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At1g61820 mips_01_05_01 "hypothetical protein"
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At1g69830 mips_01_05_01_01_01 "putative alpha-amylase"
mips_02_19
at_At1g75940 mips_01_05_01_01_02 "ATA27"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At1g76130 mips_01_05_01_01_01 "unknown protein"
mips_02_05
mips_02_16
mips_02_19
mips_02_22
at_At2g16730 mips_01_05_01_01_01 "putative beta-galactosidase"
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At2g20680 mips_01_05_01_01_01 "(1-4)-beta-mannan endohydrolase"
mips_40_25
at_At2g32810 mips_01_05_01_01_01 "putative beta-galactosidase (BGAL9)"
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
at_At2g32860 mips_01_05 "putative beta-glucosidase"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At2g44450 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
at_At2g44460 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
at_At2g44480 - mips_01_20_01 "putative beta-glucosidase"
mips_01_20_01_07
mips_11_05_03
at_At2g44490 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
at_At3g09260 mips_01_05_01_01_02 "thioglucosidase 3D precursor"
mips_01_20_01
mips_01_20_01_07
at_At3g13750 mips_01_05_01_01_01 "galactosidase, putative"
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At3g15800 mips_01_04_01 "putative beta-1,3-glucanase precursor"
mips_01_05_01_01
mips_11_05
mips_11_05_03
at_At3g18080 mips_01 "beta-glucosidase like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At3g21370 - mips_01_20_01 "beta-glucosidase, putative"
mips_01_20_01_07
mips_11_05_03
at_At3g23640 mips_01_05_01_01_02 "alpha glucosidase like protein"
mips_02_01
mips_02_19
mips_40_08
mips_40_25
mips_63_13
mips_63_13_01
at_At3g57240 mips_01 "beta-1,3-glucanase"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_11
mips_11_05
mips_11_05_03
mips_98
at_At3g57260 mips_01 "beta-1,3-glucanase 2 (BG2)"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_11
mips_11_05
mips_11_05_03
mips_98
mips_99
at_At3g60130 mips_01_05_01_01_01 "beta-glucosidase-like protein"
mips_01_20_01
mips_01_20_01_07
mips_02_01
at_At3g60140 mips_01_05_01 "beta-glucosidase"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At3g62740 mips_01_05_01_01_01 "beta-glucosidase-like protein"
mips_01_05_01_01_02
at_At4g26140 mips_01_05_01_01_01 "putative beta-galactosidase"
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
at_At4g27830 mips_01_05_01_01_02 "beta-glucosidase like protein"
mips_11_05_03
at_At4g35010 mips_01_05_01_01_01 "beta-galactosidase - like protein"
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At4g36360 mips_01_05_01_01_01 "beta-galactosidase like protein"
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At5g03650 mips_01_05_01_01_01 "1,4-alpha-glucan branching enzyme protein soform SBE2.2 precursor"
mips_01_05_01_03
mips_01_05_01_03_02
mips_02_19
at_At5g11720 mips_01_05_01_01_02 "alpha-glucosidase 1"
mips_02_01
mips_02_19
mips_40_25
mips_63_13
mips_63_13_01
at_At5g24550 mips_01_05_01_01_02 "beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At5g26000 - mips_01_20_01 "myrosinase precursor"
mips_01_20_01_07
mips_11_05_03
at_At5g44640 mips_01_05_01_01_02 "beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At5g54570 - mips_01_20_01 "beta-glucosidase"
mips_01_20_01_07
at_At5g56870 mips_01_05_01_01_01 "beta-galactosidase (emb|CAB64740.1)"
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At5g63800 mips_01_05_01 "beta-galactosidase like protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
at_At5g63810 mips_01_05_01_01_01 "beta-galactosidase (emb|CAB64746.1)"
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
at_At5g63840 mips_01_05_01_01_02 "glucosidase II alpha subunit"
mips_02_01
mips_02_19
mips_40_25
mips_63_13
mips_63_13_01
Training Accuracy: 40/45 (88.89%)
Training Frequency class 'mips_01_05_01_01': 349/2913 (11.98%)
Evaluation on validation data (1468 items):
at_At1g31740 mips_01_05_01 "putative protein"
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_30_01
mips_40_01
mips_40_25
at_At1g47600 mips_01_05_01_01_02 "hypothetical protein"
mips_01_20_01
mips_01_20_01_07
at_At1g60260 mips_01_05_01 "putative beta-glucosidase"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
mips_40_02
at_At1g60270 - mips_01_20_01 ""
mips_01_20_01_07
at_At2g25630 mips_01_05_01 "putative beta-glucosidase"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
at_At2g28470 mips_01_05_01_01_01 "beta-galactosidase like protein"
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At3g45940 mips_01_05_01_01_02 "putative protein"
mips_02_01
mips_02_19
mips_40_08
mips_40_25
mips_63_13
mips_63_13_01
at_At3g55260 mips_01_05_01_01_01 "beta-N-acetylhexosaminidase -like protein"
mips_01_06_04
mips_40_25
at_At4g22100 - mips_01_20_01 "glucosidase like protein"
mips_01_20_01_07
at_At4g27820 mips_01_05_01_01_02 "putative beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
at_At5g01930 mips_01 "(1-4)-beta-mannan endohydrolase-like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
at_At5g20390 mips_01 "beta-1,3-glucanase-like protein"
mips_01_05
mips_01_05_01_01
mips_11_05
mips_11_05_03
mips_25_03
mips_30
mips_98
at_At5g20710 mips_01_05_01_01_01 "beta-galactosidase like protein"
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At5g25980 - mips_01_20_01 "myrosinase TGG2"
mips_01_20_01_07
at_At5g36890 mips_01_05_01_01_01 "beta-glucosidase -like protein"
mips_01_05_01_01_02
mips_02_01
Validation Accuracy: 12/15 (80.00%)
Validation Frequency class 'mips_01_05_01_01': 154/1468 (10.49%)
Evaluation on propertest data (2441 items):
at_At1g02310 mips_01_05_01_01 "(1-4)-beta-mannan endohydrolase precursor, putative"
at_At1g02850 - mips_01_20_01 "Similar to beta-glucosidases (At1g02850)"
mips_01_20_01_07
at_At1g09010 mips_01_05_01_01_01 "putative Bos beta-mannosidase"
mips_06_07_02
mips_06_07_02_02
mips_25_05_10
mips_25_05_13
mips_25_05_17
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_17
mips_40_25
at_At1g32860 mips_01_04 "hypothetical protein"
mips_01_04_01
mips_01_05_01
mips_01_05_01_01
mips_11_05
mips_11_05_03
at_At1g45130 - mips_01_20_01 "putative beta-galactosidase emb|CAB64741.1; similar to ESTs gb|N96096.1, gb|AW096565.1, gb|AI994624.1, gb|T42360.1, gb|AI100297.1"
mips_01_20_01_07
mips_40_01
mips_40_25
at_At1g51490 mips_01_05_01_01 "cyanogenic beta-glucosidase, putative"
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At1g66270 - mips_01_20_01 "beta-glucosidase"
mips_01_20_01_07
at_At1g66280 mips_01_05_01 "beta-glucosidase, putative"
mips_01_05_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At1g68560 mips_01_05_01_01_02 "alpha-xylosidase precursor"
mips_02_01
mips_02_19
mips_40_08
mips_40_25
mips_63_13
mips_63_13_01
at_At1g77410 mips_01_05_01_01_01 ""
mips_01_20_01
mips_01_20_01_07
mips_40_01
mips_40_25
at_At1g77780 mips_01_05 "endo-1,3-beta-glucanase - like predicted GPI-anchored protein"
mips_01_05_01
mips_01_05_01_01
mips_11
mips_11_05
mips_11_05_03
at_At2g36390 - mips_01_05_01_03 "starch branching enzyme class II (sbe2-1)"
mips_01_05_01_03_02
mips_02_19
at_At2g39930 mips_01_05_01_01_01 "putative isoamylase"
mips_02_19
at_At2g44470 mips_01_05_01_01_02 "putative beta-glucosidase"
at_At3g18070 mips_01_05_01_01_02 "beta-glucosidase, putative"
mips_01_20_01
mips_01_20_01_07
at_At3g20440 mips_01 "1,4-alpha-glucan branching enzyme, putative"
mips_01_01_07
mips_02
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_03
mips_01_05_01_03_02
mips_02_19
mips_14
mips_14_04
mips_25
mips_25_05
mips_40_03
mips_67
mips_67_10
at_At3g46570 mips_01_05_01 "glucosidase-like protein"
mips_01_05_01_01
mips_11_05
mips_11_05_03
at_At3g52840 mips_01 "beta-galactosidase precursor - like protein"
mips_01_05
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_30
mips_30_01
mips_40
mips_40_01
mips_40_25
at_At3g60120 mips_01_05_01_01_02 "beta-glucosidase-like protein"
mips_01_20_01
mips_01_20_01_07
at_At3g62750 mips_01_05 "beta-glucosidase-like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_01_05_01_01_02
mips_40_02
at_At4g09020 mips_01_05_01_01_01 "isoamylase-like protein"
mips_02_19
at_At4g21760 mips_01_05 "beta-glucosidase -like protein"
mips_01_05_01
mips_01_05_01_01
mips_11
mips_11_05
mips_11_05_03
at_At4g25000 mips_01_05 "alpha-amylase like protein"
mips_01_05_01_01
mips_02_19
at_At5g04360 mips_01_05_01_01_01 "pullulanase-like protein (starch debranching enzyme)"
mips_02_19
at_At5g17500 mips_01_05_01_01_01 "putative protein"
at_At5g24540 mips_01_05 "beta-glucosidase"
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20_01
mips_01_20_01_07
mips_11_05
mips_11_05_03
at_At5g28510 mips_01_05 "thioglucosidase (myrosinase) - like protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_02
mips_01_20
mips_01_20_01
mips_01_20_01_07
mips_11
mips_11_05
mips_11_05_03
at_At5g42260 mips_01_05_01_01_02 "beta-glucosidase"
mips_01_20_01
mips_01_20_01_07
mips_11_05_03
Propertest Accuracy: 24/28 (85.71%)
Propertest Frequency class 'mips_01_05_01_01': 241/2441 (9.87%)
New (unknown) data (1468 items):
at_At1g10050 - mips_40_01 "putative xylan endohydrolase"
at_At1g15460 - mips_67_04_07 "putative protein"
mips_67_50
mips_67_50_05
at_At1g28340 - mips_10 "hypothetical protein"
mips_10_01_01
at_At1g30080 - mips_01 "beta-1,3-glucanase precursor, putative"
mips_01_04
mips_01_04_01
mips_01_05
mips_01_05_01
mips_11
mips_11_05
mips_11_05_03
mips_98
mips_99
at_At1g58370 - mips_40_01 "unknown protein"
mips_98
at_At1g64760 - mips_01_04_01 "hypothetical protein"
at_At1g66250 - mips_01_04_01 "beta-1,3-glucanase precursor, putative"
at_At1g72990 - mips_40_01 "unknown protein (At1g72990)"
mips_40_25
at_At1g77790 - no entry null
at_At2g01630 - mips_01_04_01 "beta-1,3-glucanase like protein"
at_At2g05790 - mips_01_04 "putative beta-1,3-glucanase"
mips_01_04_01
mips_01_05_01
mips_30_01
at_At2g16230 - mips_01_04 "putative beta-1,3-glucanase"
mips_01_04_01
mips_30_01
at_At2g19440 - mips_01 "putative beta-1,3-glucanase, predicted GPI-anchored protein"
mips_01_04
mips_01_04_01
mips_01_05
mips_01_05_01
mips_30
mips_30_01
mips_98
mips_99
at_At2g26600 - mips_01_04_01 "beta-1,3-glucanase like protein"
mips_11_05
mips_11_05_03
at_At2g27500 - mips_01_04 "beta-1,3-glucanase like protein"
mips_01_04_01
mips_11_05_03
at_At2g39640 - mips_01_04_01 "putative beta-1,3-glucanase, predicted GPI-anchored protein"
at_At3g07320 - mips_01_04_01 "putative beta-1,3-glucanase precursor"
at_At3g10890 - no entry null
at_At3g10900 - no entry null
at_At3g13560 - mips_01_04_01 "glucan endo-1,3-beta-glucosidase precursor, putative"
at_At3g24330 - mips_01_04_01 "beta-1,3-glucanase, putative"
at_At3g24710 - no entry null
at_At3g26130 - no entry null
at_At3g26140 - no entry null
at_At3g30540 - no entry null
at_At3g55430 - mips_01_04_01 "beta-1,3-glucanase - like protein"
mips_01_05
mips_30
mips_98
at_At3g55780 - mips_01_04 "beta-1,3-glucanase - like protein"
mips_01_04_01
mips_01_20_01
mips_11_05_03
at_At3g57270 - no entry null
at_At3g61810 - mips_01 "putative protein"
mips_01_04_01
mips_01_05
mips_01_05_01
mips_11
mips_11_05
mips_11_05_03
mips_98
mips_99
at_At4g01040 - mips_11_07_03 "hypothetical protein"
mips_11_10
mips_11_10_07
mips_40_27
mips_63_13
mips_63_13_01
at_At4g14080 - mips_01 "A6 anther-specific protein"
mips_01_04
mips_01_04_01
mips_01_05
mips_01_05_01
mips_30
mips_30_01
mips_98
mips_99
at_At4g16260 - no entry null
at_At4g17180 - mips_01_04 "putative protein"
mips_01_04_01
mips_01_05
mips_01_05_01
mips_11
mips_11_05
mips_11_05_03
mips_30
mips_30_01
at_At4g18340 - mips_01_04_01 "beta-1,3-glucanase-like protein"
at_At4g19720 - mips_01 "putative protein"
mips_01_05
mips_11
mips_11_05
mips_11_05_03
at_At4g19730 - mips_11_05_03 "putative protein"
mips_11_07
mips_11_07_03
mips_11_10
mips_11_10_07
mips_40_27
mips_63_13
mips_63_13_01
mips_63_13_99
at_At4g19740 - mips_11_07_03 "putative protein"
mips_11_10
mips_11_10_07
mips_40_27
mips_63_13
mips_63_13_01
at_At4g19750 - mips_11_05_03 "chitinase - like protein"
mips_11_07
mips_11_07_03
mips_11_10
mips_11_10_07
mips_30_01
mips_40_27
mips_63_13
mips_63_13_01
at_At4g19760 - mips_63_13 "chitinase - like protein"
mips_63_13_99
at_At4g19770 - mips_40_27 "putative protein"
mips_63_13
mips_63_13_01
mips_63_13_99
at_At4g19800 - mips_01_05 "chitinase - like protein"
mips_11
mips_11_01
mips_11_05
mips_11_05_03
mips_11_07
mips_11_07_03
mips_11_10
mips_11_10_07
mips_13
mips_13_11
mips_40_03
mips_40_27
mips_63_13
mips_63_13_01
mips_63_13_99
at_At4g19810 - mips_11_05_03 "putative chitinase"
at_At4g19820 - mips_40_27 "putative chitinase"
mips_63_13
mips_63_13_01
at_At4g26830 - mips_01 "putative beta-1,3-glucanase"
mips_01_04
mips_01_04_01
mips_01_05
mips_01_05_01
mips_30
mips_30_01
mips_98
mips_99
at_At4g28320 - no entry null
at_At4g29360 - mips_01_04_01 "beta-1,3-glucanase-like protein"
at_At4g31140 - mips_01_04_01 "1,3-beta-glucanase - like predicted GPI-anchored protein"
mips_11_05_03
at_At4g33830 - mips_40_01 "putative protein"
at_At4g33840 - mips_40_01 "putative protein"
at_At4g34480 - mips_01_04_01 "putative protein (fragment)"
at_At5g16580 - no entry null
at_At5g16700 - no entry null
at_At5g18220 - mips_01_04_01 "beta-1,3-glucanase - like predicted GPI-anchored protein"
at_At5g20330 - mips_11_05_03 "beta-1,3-glucanase bg4"
mips_25_03
mips_30_01
at_At5g20340 - no entry null
at_At5g20560 - no entry null
at_At5g20870 - mips_01_04_01 "beta-1,3-glucanase - like protein"
mips_01_05
at_At5g24090 - mips_03_03_03 "acidic endochitinase (dbj|BAA21861.1)"
mips_40_27
at_At5g34940 - no entry null
at_At5g42100 - mips_01_04_01 "beta-1,3-glucanase - like predicted GPI-anchored protein"
mips_11_05_03
at_At5g42720 - mips_01_04 "beta-1,3-glucanase-like protein"
mips_01_04_01
mips_11_05_03
at_At5g55180 - mips_01_04_01 "beta-1,3-glucanase-like protein"
at_At5g56590 - mips_01_04 "beta-1,3-glucanase-like protein"
mips_01_04_01
mips_01_05_01
mips_30_01
at_At5g58090 - mips_01_04 "predicted GPI-anchored protein"
mips_01_04_01
mips_11_05_03
mips_30_01
at_At5g58480 - mips_01_04_01 "beta 1-3 glucanase - like predicted GPI-anchored protein"
at_At5g64790 - mips_01_04_01 "beta-1,3-glucanase"
at_At5g66460 - no entry null
at_At5g67460 - mips_01_04_01 "putative protein"
------------------
Rule 1068
scop_b > 7.8e-05
scop_g <= 0.015
scanregexp_atp_gtp_a(_orf_0,_scanregexp_id_1),profscan(_orf_0,_profscan_id_2,_ipr_3),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_3) = 0
ipr_RNA-binding_region_RNP-1___RNA_recognition_motif_(_orf_0,_ipr_1) = 0
hmmsmart_s_tkc(_orf_0,_hmmsmart_id_1),ipr_Protein_kinase(_orf_0,_ipr_2),hmmsmart_tyrkc(_orf_0,_hmmsmart_id_3) = 0
profscan(_orf_0,_profscan_id_1,_ipr_2),blastprodom(_orf_0,_blastprodom_id_3,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_4,_ipr_2) = 0
blastprodom(_orf_0,_blastprodom_id_1,_ipr_2),hmmsmart(_orf_0,_hmmsmart_id_3,_ipr_2),fprintscan(_orf_0,_fprintscan_id_4,_ipr_2) = 0
hmmsmart(_orf_0,_hmmsmart_id_1,_ipr_2) = 1
-> class mips_04_05_01_04 "transcriptional control"
Evaluation on training data (2913 items):
at_At1g08000 mips_04_05_01_04_01 "GATA transcription factor 3, putative"
mips_06_04
mips_13_11
mips_25_05_10
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
mips_63_17_09
at_At1g08680 - mips_62_02_01_01 "unknown protein"
at_At1g11800 - mips_10_01_05_01 "unknown protein"
mips_10_01_05_01_04
mips_10_01_99
mips_20_25_16
mips_20_25_16_01
mips_20_25_16_01_99
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_43
mips_43_03
mips_43_03_13
mips_62_01
mips_62_01_07
mips_63_17_01
at_At1g14200 - mips_03_01 "unknown protein"
mips_03_01_05
mips_03_01_05_01
mips_25_03
mips_63_17
mips_63_17_09
at_At1g18660 - mips_03 "unknown protein"
mips_10_05
mips_25
mips_25_05
mips_25_05_25
mips_40_02
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_63_01
mips_63_03
mips_63_03_01
mips_63_17
mips_63_17_09
at_At1g19310 - mips_47 "unknown protein"
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_63_17
mips_63_17_09
at_At1g23980 - mips_03_03_01 "hypothetical protein"
mips_03_03_01_03
mips_03_03_04
mips_03_03_04_07
at_At1g45180 mips_04_05_01_04_03 "hypothetical protein; similar to ESTs gb|AI994577.1"
mips_45
mips_45_03
mips_45_03_17
at_At1g49210 mips_04_05 "hypothetical protein"
mips_04_05_01
mips_04_05_01_04
at_At1g50620 mips_04_05_01_04_03 "hypothetical protein"
mips_63_17_09
at_At1g51220 mips_04_05 "hypothetical protein"
mips_04_05_01
mips_04_05_01_04
mips_63_03
mips_63_03_01
mips_63_03_03
mips_63_17
mips_63_17_09
at_At1g53690 - mips_04_01 "RNA polymerase II, putative"
mips_04_01_01
mips_04_01_99
mips_04_03
mips_04_03_01
mips_62_01_07
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_19_99
at_At1g53820 - mips_06_13 "hypothetical protein"
mips_47_03_15
mips_47_03_15_07
mips_63_17_09
at_At1g55530 - mips_03_03 "unknown protein"
mips_03_03_01
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_25_03
at_At1g56030 - mips_08 "hypothetical protein"
mips_08_07
mips_08_16
mips_08_22
mips_14_04_03
mips_14_04_03_01
mips_30_25
mips_40_02
mips_40_04
mips_48
mips_63_17
mips_63_17_09
at_At1g66050 mips_03 "hypothetical protein"
mips_03_03
mips_03_03_01
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_14
mips_14_01
mips_14_01_01
mips_14_01_05
mips_63_01
mips_63_03
mips_63_03_01
mips_63_17
mips_63_17_09
at_At1g67180 - mips_03_01_03 "hypothetical protein"
mips_03_01_05
mips_03_01_05_01
mips_03_01_05_01_01
mips_03_01_05_03
mips_03_01_05_03_01
mips_06_10
mips_11_01_01
mips_11_01_99
mips_11_05_01
mips_14_01
mips_14_01_01
mips_30_10
mips_30_10_03
mips_33
mips_33_03
mips_33_03_02
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_63_03_01
at_At1g67800 - mips_08_07 "unknown protein"
mips_08_07_99
mips_13_03
mips_13_03_01
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_43
mips_43_03
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_47_03_01_01
mips_47_03_01_01_01
mips_63_17_01
mips_67_99
at_At1g74410 mips_04_05 "putative RING zinc finger protein"
mips_04_05_01
mips_04_05_01_04
at_At1g77840 - mips_04_05_01_01 "putative eukaryotic translation initiation factor 5 (EIF-5) sp|P48724; similar to ESTs emb|F19992, gb|N96933, emb|Z33699, emb|F19991"
at_At2g04240 mips_04 "putative RING zinc finger protein"
mips_04_05_01_04
mips_98
at_At2g04930 mips_04_05_01_01 "hypothetical protein"
mips_04_05_01_04_01
mips_06_07_03
at_At2g06890 - mips_03_01 "putative retroelement integrase"
mips_03_01_03
mips_03_01_05
mips_03_01_05_03
mips_29
mips_29_01
at_At2g18380 - mips_04_05_01_01 "putative GATA-type zinc finger transcription factor"
mips_25_05_15
mips_35
mips_35_03
mips_35_03_12
at_At2g29840 mips_03 "hypothetical protein"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_25
mips_25_03
mips_45
mips_45_03
mips_45_03_17
at_At2g30580 mips_04 "C3HC4 zinc finger like protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_20
mips_20_25
mips_20_25_16
mips_40_10
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_63
mips_63_01
mips_63_03
mips_63_17
mips_63_17_09
mips_98
at_At2g36720 mips_03_01_99 "putative PHD-type zinc finger protein"
mips_04_05_01_04_01
mips_30_10
mips_40_10_03
at_At2g38970 - mips_30_27 "putative retroelement pol polyprotein"
mips_30_27_01
mips_45_03_05
mips_45_03_05_09
mips_47_03_11
mips_47_03_11_07
mips_62_02_01_02
mips_62_02_01_02_03
at_At2g42030 - mips_10_05 "putative RING zinc finger protein"
mips_25_05_25
mips_40_02
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_63_17
mips_63_17_09
at_At2g48100 mips_01 "putative exonuclease"
mips_01_03
mips_01_03_16
mips_04
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_40
mips_40_10
mips_62
mips_62_02
mips_62_02_01
mips_63
mips_63_03
mips_63_03_01
mips_63_03_03
mips_98
at_At3g07200 mips_04_05_01_04_01 "putative RING zinc finger protein"
mips_04_05_01_04_99
mips_14_04_03
mips_14_04_03_03
mips_20_25_16
mips_48
mips_63_17_11
at_At3g07370 - mips_06 "unknown protein"
mips_06_01
mips_06_10
mips_11_01_05
mips_11_05
mips_11_05_05
mips_11_05_05_05
mips_45_03_12
mips_45_03_12_01
mips_63_01
at_At3g14740 - mips_04_99 "hypothetical protein"
mips_45
mips_45_03
mips_45_03_15
mips_47_03_15
mips_47_03_15_07
at_At3g16980 - mips_01_03 "RNA Polymerase II subunit 14.5 kD, putative"
mips_01_03_01
mips_01_03_04
mips_01_03_99
mips_04_05_01_01
mips_40_10_99
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_63_03_01
mips_63_17
mips_63_17_09
mips_63_19_99
at_At3g17660 - mips_62_02_01_01 "unknown protein"
mips_62_02_01_01_01
at_At3g17670 - mips_11_01_05 "hypothetical protein"
mips_11_05_05
mips_11_05_05_05
mips_63_06
at_At3g18290 mips_04_05_01_04_01 "zinc finger protein, putative"
at_At3g19950 - mips_14_04_03_03 "unknown protein"
mips_45_03_17
at_At3g24010 mips_04_05_01_04_01 "PHD-finger protein, putative"
mips_40_10_03
mips_63_17
mips_63_17_09
at_At3g42790 mips_04 "nucleic acid binding protein-like"
mips_04_05_01_04_01
mips_14_10_02_03
mips_40_10
mips_98
at_At3g47160 - mips_03_03 "RNA-binding protein-like protein"
mips_03_03_01
mips_03_03_01_01
mips_03_03_01_03
mips_03_03_04
mips_03_03_04_07
mips_06_04
mips_06_10
mips_06_13
mips_30_22
mips_30_25
mips_48
mips_63_17
mips_63_17_09
at_At3g50870 - mips_04_05_01_01 "transcription factor-like protein"
mips_25_05_10
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At3g53710 - mips_03_03_02 "ARF GAP-like zinc finger-containing protein ZIGA2"
mips_08_16
mips_08_19
mips_14_04_03_05
mips_62_02_01_01
at_At4g01270 - mips_03 "putative RING zinc finger protein"
mips_03_03
mips_03_03_01
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_14
mips_14_01
mips_25
mips_25_05
mips_25_05_13
mips_30
mips_30_04
mips_33
mips_33_03
mips_33_03_13
mips_35_03_17
mips_40_04
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_63
mips_63_06
mips_63_07
mips_63_17
mips_63_17_09
mips_98
at_At4g03510 - mips_47_03_15 "RMA1 RING zinc finger protein"
mips_47_03_15_07
mips_63_17_09
at_At4g04260 - mips_03_01_09 "putative ES43-like protein"
mips_03_01_09_05
mips_30_10_03
at_At4g07850 - mips_03_01_03 "putative polyprotein"
mips_03_01_05
mips_03_01_05_03
mips_29_01
at_At4g07950 - mips_01_03 "putative DNA-directed RNA polymerase subunit"
mips_01_03_01
mips_01_03_04
mips_01_03_99
mips_04_01
mips_04_01_01
mips_04_05_01_01
mips_40_10_99
mips_63_03_01
mips_63_17_09
at_At4g14700 - mips_03_03_01_01 "replication control protein 1 like"
mips_14_04_03
mips_14_04_03_03
at_At4g18110 mips_04_05 "hypothetical protein"
mips_04_05_01
mips_04_05_01_04
mips_25
mips_25_03
mips_30
mips_30_19
mips_40_19
mips_63_17
mips_63_17_09
at_At4g20340 - mips_04_05_01_01 "putative protein"
mips_63_03_01
at_At4g25380 mips_04_05_01_01 "putative protein"
mips_04_05_01_04_01
mips_04_05_01_04_03
mips_04_05_99
mips_04_99
at_At4g26150 mips_04_05_01_04_01 "putative transcription factor"
mips_04_05_01_04_05
mips_13_11
mips_14_01
mips_14_01_03
mips_14_01_03_01
mips_14_01_03_99
mips_25_05_02
mips_33
mips_33_03
mips_33_03_09
mips_33_03_09_01
mips_43
mips_43_03
mips_43_03_09
mips_43_03_09_01
mips_63_03_01
at_At4g28270 - mips_37 "putative protein"
mips_37_03
mips_37_03_15
mips_37_03_15_07
at_At4g36240 mips_04_05 "putative protein"
mips_04_05_01
mips_04_05_01_04
mips_14
mips_14_04
mips_25
mips_63_03
at_At4g36620 - mips_04_05_01_01 "transcription factor like protein"
mips_25_05_10
at_At4g39100 - mips_03_01_09 "ES43 like protein"
mips_03_01_09_05
mips_30_10
mips_30_10_03
mips_40_10_03
at_At5g05530 - mips_03_03_04 "putative protein"
mips_03_03_04_07
at_At5g13920 - mips_03_03_04 "putative protein"
mips_03_03_04_05
mips_08_04
mips_08_07
mips_08_07_07
mips_08_07_22
mips_08_22
mips_08_99
mips_13
mips_13_05
mips_13_05_99
mips_30_04_05
mips_40_04
mips_40_04_05
mips_40_08
mips_40_25
mips_63_01
mips_63_06
mips_63_19
at_At5g15840 mips_04_05_01_04_03 "CONSTANS"
mips_63_03_01
at_At5g20510 - mips_47_03_15 "zinc finger protein - like"
mips_47_03_15_07
mips_63_03_01
at_At5g22750 mips_03 "putative protein"
mips_03_01
mips_03_01_05
mips_03_01_05_01
mips_04
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_40_10
mips_63
mips_63_03
mips_63_17
mips_63_17_01
mips_63_19
at_At5g22890 mips_04_05_01_04_01 "putative protein"
mips_63_01
at_At5g37270 - mips_03_01_05_01 "putative protein"
at_At5g40250 - mips_14_04_03 "RING finger -like protein"
mips_14_04_03_03
at_At5g41010 - mips_04_01 "unknown protein"
mips_04_01_01
mips_04_01_99
mips_04_03
mips_04_03_01
mips_40_10_99
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_62_02_01_01_99
mips_63_03_01
mips_63_17
mips_63_17_09
mips_63_19_99
at_At5g44280 mips_03_01_09 "putative protein"
mips_03_01_09_05
mips_04_05_01_04_03
mips_10_05_02
mips_10_05_02_26
at_At5g46650 - mips_14_04_03_03 "putative protein"
at_At5g46750 - mips_04_09 "zinc finger protein Glo3-like"
mips_08_07
mips_40_08
mips_40_09
mips_40_10_05
mips_62_02_01_01
at_At5g47140 mips_04 "putative protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_40_10
mips_98
at_At5g55390 mips_03 "putative protein"
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_63_03
mips_63_17_09
at_At5g60710 - mips_10_01_09 "putative protein"
mips_10_01_09_03
mips_13_07
mips_25_05_10
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
mips_40_27
mips_43
mips_43_03
mips_43_03_19
mips_63_07
mips_63_17_01
mips_67_01
mips_67_01_01
mips_67_04_07
at_At5g63290 - mips_01 "oxygen-independent coproporphyrinogen-like protein"
mips_01_07
mips_01_07_01
mips_01_20
mips_01_20_19
mips_01_20_19_01
mips_03
mips_03_01
mips_03_01_09
mips_03_01_09_05
mips_06
mips_40_10
mips_63_17_09
at_At5g63900 mips_04_05_01_04_01 "putative protein"
Training Accuracy: 28/74 (37.84%)
Training Frequency class 'mips_04_05_01_04': 302/2913 (10.37%)
Evaluation on validation data (1468 items):
at_At1g02040 mips_04_05 "hypothetical protein"
mips_04_05_01
mips_04_05_01_04
mips_63_03
mips_63_03_01
mips_63_03_03
mips_63_17
mips_63_17_09
at_At1g05380 mips_04_05 "unknown protein (T25N20.3)"
mips_04_05_01
mips_04_05_01_04
mips_11
mips_11_05
mips_11_05_03
mips_11_05_05
mips_13
mips_13_11
mips_40_10_05
mips_40_10_99
mips_45
mips_45_03
mips_45_03_05
mips_45_03_05_09
mips_47
mips_47_03
mips_47_03_05
mips_47_03_05_02
mips_63_03
at_At1g15100 mips_04_05 "RING-H2 zinc finger like protein"
mips_04_05_01
mips_04_05_01_04
mips_06_13
at_At1g17970 - mips_03_03_04 "unknown protein"
mips_03_03_04_07
at_At1g18780 mips_04 "hypothetical protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_06
mips_06_13
mips_40_07
mips_45
mips_45_03
mips_45_03_17
mips_63
mips_63_17
mips_63_17_09
mips_98
at_At1g50410 - mips_03_01_05 "unknown protein"
mips_03_01_05_01
mips_03_01_09
mips_03_01_09_05
at_At1g54930 - mips_03_01_03 "hypothetical protein"
mips_03_01_05
mips_03_01_05_01
mips_03_01_05_03
mips_03_03_02
mips_30_10
mips_40_10_03
mips_48
mips_63_03_01
at_At1g72310 mips_04_05_01_04_03 "RING-H2 zinc finger protein (ATL3)"
at_At1g77800 - mips_40_27 "putative phorbol ester / diacylglycerol binding protein"
mips_40_27_99
mips_40_99
mips_45
mips_45_03
mips_47_03_15
mips_47_03_15_07
mips_48
at_At2g15260 mips_04_05_01_04_03 "hypothetical protein"
at_At2g40830 - mips_14_04_03 "unknown protein"
mips_14_04_03_03
at_At2g41630 mips_04_01 "transcription factor IIB (TFIIB)"
mips_04_01_01
mips_04_03
mips_04_03_01
mips_04_05_01_01
mips_04_05_01_04_01
at_At2g44410 mips_04_05_01_04_03 "unknown protein"
mips_10_05_02
mips_10_05_02_26
mips_25_05_25
at_At2g44580 - mips_14_04_03 "putative RING zinc finger protein"
mips_14_04_03_03
mips_25_03
mips_48
mips_63_17
mips_63_17_09
at_At2g47700 - mips_20_25_16 "unknown protein"
mips_25_05_25
mips_47_03_15
mips_47_03_15_07
at_At3g07120 mips_04_05_01 "putative RING zinc finger protein"
mips_04_05_01_04
mips_11
mips_11_01
mips_13
mips_13_11
mips_25_05
mips_25_05_13
mips_33_03_13
mips_35_03_17
mips_45
mips_45_03
mips_45_03_17
mips_48
mips_63_03
mips_63_17_09
at_At3g09360 mips_04 "putative transcription factor"
mips_04_01
mips_04_01_01
mips_04_03
mips_04_03_01
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_01
mips_40
mips_40_10
mips_40_10_99
mips_63
mips_63_01
mips_63_03
at_At3g14970 - mips_03_01_05_01 "hypothetical protein"
at_At3g16350 mips_04_05_01_04_03 "putative MYB family transcription factor"
at_At3g21880 - mips_62_02_01_01 "hypothetical protein"
at_At3g25030 - mips_03_03_01_03 "hypothetical protein"
mips_03_03_04
mips_03_03_04_07
mips_06_10
mips_14_01
mips_14_01_01
mips_14_01_05
mips_63_17_09
at_At3g45260 mips_04_05 "zinc finger like protein"
mips_04_05_01
mips_04_05_01_04
mips_63_03
at_At3g52100 - mips_03_01_05_03 "putative protein"
mips_13_07
mips_25_05_09
mips_43
mips_43_03
mips_43_03_09
at_At4g13350 - mips_62_02_01_01 "unknown protein"
at_At4g22140 - mips_03_01_09 "receptor like protein (fragment)"
mips_03_01_09_05
mips_30_10
mips_30_10_03
mips_40_10_03
at_At4g31450 mips_04_05_01_04_03 "unknown protein"
mips_14_04_03
mips_14_04_03_03
at_At4g37890 - mips_10_05_02 "putative protein"
mips_10_05_02_30
mips_13_07
mips_40_27
mips_63_06
mips_67_01
at_At5g01520 - mips_47 "C3HC4 type Zinc RING finger like protein"
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_48
mips_63_17
mips_63_17_09
at_At5g05610 mips_04_05_01_04_01 "nucleic acid binding protein-like"
mips_14_10
mips_14_10_02
mips_14_10_02_03
at_At5g22260 mips_04 "putative protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_40_10
mips_63
mips_63_03
at_At5g22760 - mips_03_01_09 "putative protein"
mips_03_01_09_05
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At5g25830 mips_04_05_01_04_01 "GATA transcription factor - like"
at_At5g26210 - mips_47_03_15 "nucleic acid binding protein - like"
mips_47_03_15_07
mips_63_03_01
at_At5g26930 mips_04_05_01_04_01 "unknown protein"
mips_04_05_01_04_05
at_At5g27420 - mips_14_04_03 "RING-H2 zinc finger protein-like"
mips_14_04_03_03
at_At5g42940 - mips_03_01_05 "unknown protein"
mips_03_01_05_01
at_At5g53910 - mips_03_01_05_01 "putative protein"
mips_30_19
mips_48
at_At5g56840 - mips_10_05_01 "putative protein"
mips_10_05_01_10
at_At5g58610 - mips_03_01_99 "putative protein"
mips_11_05_03
mips_11_05_05
mips_40_10_05
mips_40_10_99
mips_45
mips_45_03
mips_45_03_05
mips_45_03_05_09
mips_63_17_09
at_At5g63700 mips_03_01 "unknown protein"
mips_03_01_09
mips_03_01_09_05
mips_04_05_01_04_01
mips_04_05_01_04_99
mips_06_10
mips_40_10_99
mips_63_03_01
at_At5g67480 mips_04_05_01_04_01 "putative protein"
mips_05
mips_10_01_09
mips_10_01_09_07
mips_30_04
mips_40_04
Validation Accuracy: 19/41 (46.34%)
Validation Frequency class 'mips_04_05_01_04': 158/1468 (10.76%)
Evaluation on propertest data (2441 items):
at_At1g01210 mips_01 "hypothetical protein"
mips_01_03
mips_01_03_01
mips_01_03_04
mips_01_03_99
mips_04
mips_04_01
mips_04_01_01
mips_04_05
mips_04_05_01
mips_04_05_01_01
mips_04_05_01_04
mips_40
mips_40_10
mips_40_10_99
mips_63
mips_63_03
mips_63_03_01
mips_63_17
mips_63_17_09
at_At1g01670 - mips_01_01_01_11 "hypothetical protein"
at_At1g02860 - mips_03_03_01_03 "unknown protein"
mips_06_10
mips_14_01
mips_25_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_37
mips_37_03
mips_37_03_01
mips_37_03_01_01
mips_47
mips_47_03
mips_47_03_01
mips_47_03_01_01
mips_48
mips_63_17
mips_63_17_09
at_At1g03770 - mips_03_01_05_01 "hypothetical protein"
mips_10_05_02
mips_10_05_02_26
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_63_03_01
at_At1g04790 mips_04_05_01_04_03 "Unknown protein (At1g04790; F13M7.22)"
mips_05_04
mips_40_10_99
mips_63_17
mips_63_17_09
at_At1g05120 - mips_03_01_05_01 "hypothetical protein, 3' partial"
at_At1g10170 mips_04 "hypothetical protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_10
mips_10_05
mips_11
mips_11_01
mips_13
mips_13_07
mips_13_11
mips_14
mips_14_04
mips_25
mips_40_10
mips_63
mips_63_03
mips_98
at_At1g11100 - mips_03_01_05_01 "transcription factor RUSH-1alpha isolog"
mips_03_01_09
mips_03_01_99
at_At1g32340 mips_04_05_01_04_01 "RING finger protein, putative"
mips_10_01_11
mips_63_17_09
at_At1g49850 - mips_01_06_01 "RING-H2 finger protein RHY1a"
mips_03_03_01_01
mips_03_03_04
mips_03_03_04_07
mips_40_22
mips_63_17
mips_63_17_09
at_At1g55970 mips_04_05_01_04_01 "CREB-binding protein, putative"
mips_10_01_09
mips_10_01_09_07
mips_13_03
mips_13_03_01
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At1g56040 - mips_14_01 "hypothetical protein"
mips_25_05_09
mips_30_04
mips_30_04_07
mips_35_03_09
mips_37
mips_37_03
mips_37_03_13
mips_37_03_13_05
mips_40_04
mips_40_04_07
mips_45
mips_45_03
mips_45_03_09
mips_47
mips_47_03
mips_47_03_13
mips_47_03_13_05
at_At1g67220 mips_04_05_01_04_01 "hypothetical protein"
mips_10_01_09
mips_10_01_09_07
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At1g72220 - mips_40_04 "RING-H2 zinc finger protein ATL3, putative"
mips_40_04_05
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_63_17_09
at_At1g73760 - mips_03_03_01_01 "putative RING zinc finger protein"
mips_03_03_04
mips_03_03_04_07
mips_45
mips_45_03
mips_45_03_17
at_At1g74990 - mips_10_01 "RING zinc finger like protein"
mips_10_01_01
mips_47
mips_47_03
mips_47_03_15
mips_47_03_15_07
mips_63_01
mips_63_03
mips_63_17
mips_63_17_09
at_At2g15530 mips_04_05_01_04_03 "putative RING zinc finger protein"
mips_63_03_01
mips_63_17_09
at_At2g18090 mips_03_01_09 "Unknown protein"
mips_03_01_09_05
mips_04_05_01_04_01
mips_30_10
mips_30_10_03
at_At2g18650 mips_03_01_05_01 "putative RING zinc finger protein"
mips_04_05_01_01
mips_04_05_01_04_01
mips_11_01_09
mips_40_10_03
mips_40_27
mips_63_03_01
at_At2g20030 mips_03 "putative RING zinc finger protein"
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_03
mips_25
mips_25_05
mips_25_05_01
mips_33_03_02
mips_33_03_07
mips_40_03
mips_45
mips_45_03
mips_45_03_03
mips_45_03_03_01
mips_47
mips_47_03
mips_47_03_05
mips_47_03_05_02
mips_63_01
mips_63_03
mips_63_17_09
at_At2g22680 - mips_10_05 "copia-like retroelement pol polyprotein"
mips_10_05_02
mips_10_05_02_30
mips_14
mips_14_04
mips_20
mips_25
mips_25_05
mips_40_02
mips_67
mips_67_01
at_At2g31380 - mips_06_04 "B-box zinc finger protein (STH)"
mips_11_01
mips_30_08
mips_30_25
mips_40_25
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
mips_63_17
mips_63_17_09
at_At2g37550 - mips_08_16 "Asp1 (asp1)"
mips_08_19
mips_62
mips_62_02
mips_62_02_01
mips_62_02_01_01
at_At2g37580 - mips_01_05 "putative RING zinc finger protein"
mips_01_05_01
mips_01_05_01_01
mips_01_05_01_01_01
mips_05
mips_06_07
mips_40_02
at_At2g38560 - mips_04_05_01_01 "putative elongation factor"
at_At2g45100 - mips_04_01 "putative transcription factor IIIB 70 KD subunit (TFIIIB)"
mips_04_01_01
mips_04_03
mips_04_03_01
mips_04_05_01_01
mips_40_10_99
at_At2g45920 - mips_06_01 "unknown protein"
mips_45
mips_45_03
mips_45_03_12
mips_45_03_12_01
mips_48
mips_62
mips_62_01
mips_62_01_07
mips_63_17
mips_63_17_09
at_At3g09770 - mips_03_03_01_01 "putative RING zinc finger protein"
mips_03_03_04
mips_03_03_04_07
mips_40_08
mips_40_09
mips_48
at_At3g10330 mips_04_01 "transcription initiation factor IIB (TFIIB)"
mips_04_01_01
mips_04_03
mips_04_03_01
mips_04_05_01_01
mips_04_05_01_04_01
at_At3g10810 mips_04_05 "putative RING zinc finger protein"
mips_04_05_01
mips_04_05_01_04
mips_06_07
mips_10_05
mips_30
mips_30_04
mips_40_02
mips_40_04
mips_40_04_05
mips_48
mips_63_01
mips_63_17
mips_63_17_09
at_At3g11200 mips_04_05 "putative nucleic acid binding protein"
mips_04_05_01
mips_04_05_01_04
mips_04_05_01_04_01
mips_63_03
at_At3g14270 - mips_06 "unknown protein"
mips_08_13
mips_10
mips_10_01_99
mips_14_04_03
mips_14_04_03_01
mips_30_25
at_At3g14980 - mips_11_05 "PHD-finger protein, putative"
mips_11_05_03
mips_11_05_05
mips_40_10_05
mips_40_10_99
mips_45
mips_45_03
mips_45_03_05
mips_45_03_05_09
mips_47
mips_47_03
mips_47_03_05
mips_47_03_05_02
at_At3g15070 - mips_03 "RING zinc finger like protein"
mips_03_03
mips_03_03_01
mips_03_03_04
mips_03_03_04_07
at_At3g16870 mips_04_05_01_04_01 "hypothetical protein"
mips_33_03_07
mips_33_03_99
at_At3g24050 mips_04_05_01_04_01 "GATA transcription factor 1 (AtGATA-1)"
mips_04_05_01_04_05
mips_14_01_03
mips_14_01_03_01
mips_14_01_03_99
mips_25_05_02
at_At3g26730 - mips_03_03_01_01 "RING zinc finger like protein"
mips_03_03_01_03
mips_03_03_04
mips_03_03_04_07
at_At3g27330 mips_03_01_05 "hypothetical protein"
mips_03_01_05_01
mips_03_03_01_03
mips_03_03_04
mips_03_03_04_07
mips_04_05_01_01
mips_04_05_01_04_01
mips_06_10
mips_11_01_09
mips_40_10_03
at_At3g51080 mips_04_05_01_04_01 "transcription factor-like protein"
mips_04_05_01_04_05
mips_14_01
mips_14_01_03
mips_14_01_03_01
mips_25_05_10
at_At3g51120 mips_03_01_09 "putative protein"
mips_03_01_09_05
mips_04_05_01_04_01
mips_04_05_01_04_99
mips_63_03_01
at_At3g57670 mips_04_05_01_04_01 "zinc finger - like protein"
at_At3g60220 mips_04 "RING-H2 zinc finger protein ATL4"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_11
mips_11_05
mips_11_05_03
mips_98
at_At3g60580 mips_04 "zinc finger protein - like"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_40_10
mips_63
mips_63_03
mips_63_03_01
mips_63_03_03
mips_63_17
mips_63_17_09
at_At3g61390 - mips_01_01 "putative protein"
mips_01_01_01
mips_01_01_01_11
mips_10_05
at_At4g05350 mips_04 "putative protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_06
mips_06_13
mips_63
mips_63_03
mips_63_03_03
at_At4g09110 - mips_03_01_05_01 "putative protein"
at_At4g09120 - mips_20_25_16 "putative protein"
mips_47_03_15
mips_47_03_15_07
at_At4g13490 - mips_10_01_05 "putative protein"
mips_10_01_05_01
mips_10_01_05_01_04
mips_13_11
mips_14_10
mips_14_10_02
mips_14_10_02_03
mips_14_10_02_99
mips_62
mips_62_01
mips_62_01_07
mips_62_02
mips_62_02_01
mips_62_02_01_02
mips_62_02_01_02_99
mips_63_17
mips_63_17_09
at_At4g14220 mips_04_05 "RING-H2 finger protein RHF1a"
mips_04_05_01
mips_04_05_01_04
mips_25
mips_25_03
at_At4g17570 mips_04_05 "unknown protein"
mips_04_05_01
mips_04_05_01_04
at_At4g22250 - mips_14_04_03_03 "hypothetical protein"
mips_48
at_At4g26400 - mips_03_03_01 "putative protein"
mips_03_03_01_01
mips_03_03_01_03
mips_03_03_04
mips_03_03_04_07
mips_08_01
mips_40_10
at_At4g26580 mips_04_05 "putative protein"
mips_04_05_01
mips_04_05_01_04
mips_45
mips_45_03
mips_45_03_17
at_At4g33940 mips_04_05_01_04_03 "putative protein"
mips_25_05_01
mips_25_05_25
mips_33
mips_33_03
mips_33_03_02
mips_63_17_09
at_At5g20910 - mips_03_03_01_03 "ABI3-interacting protein 2"
mips_45
mips_45_03
mips_45_03_17
at_At5g25560 mips_04_05_01_04_01 "putative protein"
mips_11_05_05
mips_11_05_05_99
mips_47_03_05
mips_47_03_05_01
mips_47_03_05_02
mips_47_03_11
mips_47_03_11_05
mips_47_03_15
mips_47_03_15_01
mips_63_17_09
at_At5g41430 mips_04 "unknown protein"
mips_04_05_01
mips_04_05_01_04
mips_98
at_At5g49300 mips_04_05_01_04_01 "putative protein"
mips_04_05_01_04_05
mips_14_01_03
mips_14_01_03_01
mips_14_01_03_99
mips_25_05_02
at_At5g58580 - mips_03_03_01_03 "putative protein"
mips_03_03_04
mips_03_03_04_07
mips_06_10
at_At5g61620 mips_04 "transcriptional activator - like protein"
mips_04_05
mips_04_05_01
mips_04_05_01_04
mips_98
mips_99
at_At5g63920 - mips_03_01_03 "DNA topoisomerase III"
mips_03_01_05
mips_03_01_05_01
mips_03_01_05_03
mips_03_01_99
mips_03_03_02
mips_30_10
mips_40_10_03
mips_48
mips_63_03_01
Propertest Accuracy: 30/61 (49.18%)
Propertest Frequency class 'mips_04_05_01_04': 231/2441 (9.46%)
New (unknown) data (1468 items):
at_At1g01350 - no entry null
at_At1g01660 - mips_63_06 "hypothetical protein"
at_At1g01680 - no entry null
at_At1g02030 - no entry null
at_At1g04360 - no entry null
at_At1g05690 - mips_63_07 "hypothetical protein"
at_At1g05890 - mips_03 "unknown protein"
mips_04_05_99
mips_14_04
mips_63_17_09
at_At1g06040 - mips_25_05_10 "salt-tolerance protein"
mips_40_04_05
at_At1g08010 - mips_01_02 "GATA transcription factor 3, putative"
mips_01_02_04
at_At1g08050 - mips_25_05_10 "unknown protein"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
mips_40_27
mips_40_27_01
mips_63_07
at_At1g08290 - mips_63_03_01 "putative protein"
mips_63_03_03
mips_63_17
mips_63_17_09
at_At1g09060 - mips_40_26 "hypothetical protein"
mips_40_26_03
mips_63_03_01
at_At1g10560 - mips_06 "unknown protein"
mips_06_04
mips_06_10
mips_08_01
mips_08_22
mips_10
mips_10_01_01
mips_30
mips_30_10_05
mips_40_04
mips_40_10
mips_40_10_05
mips_67
mips_67_01
mips_67_01_05
at_At1g12760 - mips_30_19 "hypothetical protein"
mips_40_19
at_At1g14510 - mips_03_01_99 "unknown protein"
at_At1g14580 - no entry null
at_At1g16710 - mips_03_03 "hypothetical protein"
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At1g18760 - mips_45 "hypothetical protein"
mips_45_03
mips_45_03_17
at_At1g18770 - mips_06_10 "hypothetical protein"
at_At1g18910 - no entry null
at_At1g19680 - mips_99 "hypothetical protein"
at_At1g20110 - mips_03_99 "unknown protein"
mips_05_07
mips_06_04
mips_30_25
mips_63_17_09
at_At1g21960 - no entry null
at_At1g22500 - no entry null
at_At1g22670 - mips_08_13 "putative RING zinc finger protein"
at_At1g22720 - no entry null
at_At1g24330 - mips_08_01 "hypothetical protein"
mips_67_01
mips_67_01_05
at_At1g25250 - no entry null
at_At1g26590 - mips_63_03_01 "C2H2 zinc finger protein, putative"
at_At1g26610 - no entry null
at_At1g26800 - no entry null
at_At1g27730 - no entry null
at_At1g28040 - no entry null
at_At1g28050 - no entry null
at_At1g29340 - mips_08_01 "arm repeat-containing protein, putative"
mips_30_10
mips_30_10_05
mips_40_10_05
at_At1g29800 - mips_13_03 "hypothetical protein"
mips_13_03_01
mips_30_22
mips_30_25
mips_40_09
mips_40_22
at_At1g30860 - mips_45 "hypothetical protein"
mips_45_03
mips_45_03_17
mips_48
at_At1g30970 - mips_63_03 "putative 11-zinc finger protein"
at_At1g32590 - mips_10_01 "hypothetical protein, 5' partial"
mips_10_01_01
mips_29
mips_29_01
mips_29_02
mips_29_99
at_At1g32800 - no entry null
at_At1g33420 - no entry null
at_At1g33480 - mips_40_07 "unknown protein"
mips_40_09
at_At1g34370 - no entry null
at_At1g34480 - no entry null
at_At1g35330 - no entry null
at_At1g35610 - no entry null
at_At1g35630 - mips_08_13 "integral membrane protein, putative"
mips_63_17_01
at_At1g36110 - no entry null
at_At1g36730 - mips_05_01 "putative protein"
mips_05_01_01
mips_05_04_01
mips_06_10
mips_62
mips_62_01
mips_62_01_07
at_At1g36950 - no entry null
at_At1g43770 - no entry null
at_At1g47360 - mips_29_01 "polyprotein, putative"
mips_29_02
mips_29_99
at_At1g47540 - no entry null
at_At1g48710 - mips_29 "hypothetical protein"
mips_29_02
at_At1g49130 - no entry null
at_At1g49200 - no entry null
at_At1g49220 - no entry null
at_At1g49230 - no entry null
at_At1g49780 - mips_08_01 "hypothetical protein"
mips_40_10_05
at_At1g49900 - no entry null
at_At1g51930 - no entry null
at_At1g53010 - no entry null
at_At1g53190 - mips_43 "putative RING finger protein gb|AAD17397.1; similar to ESTs dbj|AV43597.1, gb|AA598107.1"
mips_43_03
mips_43_03_13
mips_47_03_01
at_At1g53340 - no entry null
at_At1g55040 - mips_40_10_05 "putative protein"
mips_67_01
mips_67_01_05
at_At1g55110 - no entry null
at_At1g55440 - no entry null
at_At1g55700 - no entry null
at_At1g56680 - no entry null
at_At1g57730 - mips_45 ""
mips_45_03
mips_45_03_17
at_At1g57800 - mips_14_01_01 "hypothetical protein"
mips_14_01_05
mips_63_03_01
at_At1g57820 - mips_14_01 "putative transcription factor protein (At1g57820)"
mips_14_01_01
mips_14_01_05
mips_63_03_01
mips_63_17
mips_63_17_09
at_At1g58140 - mips_29_01 "hypothetical protein"
mips_29_02
at_At1g60190 - mips_08_01 ""
mips_30_10_05
mips_40_10_05
at_At1g60360 - no entry null
at_At1g61070 - no entry null
at_At1g61620 - mips_04_99 "unknown protein"
at_At1g61830 - no entry null
at_At1g62370 - mips_25_05_13 "hypothetical protein"
mips_33_03_13
mips_35_03_17
at_At1g63170 - no entry null
at_At1g63840 - no entry null
at_At1g65040 - mips_25_05_13 ""
mips_33
mips_33_03
mips_33_03_13
mips_35_03_17
mips_40_07
mips_63_17_09
at_At1g65180 - no entry null
at_At1g65430 - mips_63_17 "unknown protein"
mips_63_17_09
at_At1g66040 - mips_14_01_01 "hypothetical protein"
mips_14_01_05
mips_63_03_01
mips_63_17_09
at_At1g66170 - no entry null
at_At1g67210 - no entry null
at_At1g67270 - no entry null
at_At1g67780 - no entry null
at_At1g68030 - no entry null
at_At1g68070 - mips_06_10 "RING zinc finger like protein"
at_At1g68130 - no entry null
at_At1g68180 - mips_06_10 "unknown protein"
mips_45
mips_45_03
mips_45_03_17
at_At1g68190 - no entry null
at_At1g68940 - mips_06_10 "hypothetical protein"
mips_08_01
mips_40_10_05
mips_67_01
mips_67_01_05
at_At1g70000 - no entry null
at_At1g70910 - no entry null
at_At1g71980 - no entry null
at_At1g72050 - mips_63_03_03 "At1g72050/F28P5_6"
mips_63_17_09
at_At1g72200 - no entry null
at_At1g73870 - no entry null
at_At1g74620 - no entry null
at_At1g74760 - mips_63_17_09 ""
at_At1g75400 - no entry null
at_At1g75540 - no entry null
at_At1g75560 - mips_04_99 "DNA-binding protein"
at_At1g75830 - no entry null
at_At1g76390 - mips_06_10 "hypothetical protein"
mips_08_01
mips_30_10_05
mips_40_10_05
mips_67_01
mips_67_01_05
at_At1g76410 - mips_04 "putative RING zinc finger protein"
mips_98
at_At1g77250 - no entry null
at_At1g79000 - no entry null
at_At1g79350 - mips_03_01_99 "hypothetical protein"
at_At1g79380 - mips_08_07_99 "putative protein"
mips_13_07
mips_40_09
mips_48
mips_63_09
mips_63_17_01
mips_67_99
at_At1g80400 - mips_25_05_10 "putative RING zinc finger protein"
at_At2g01150 - mips_63_17 "RING-H2 finger protein RHA2b"
mips_63_17_09
at_At2g01810 - mips_04_99 "hypothetical protein"
mips_14_01_01
mips_14_01_05
mips_45_03_15
mips_63_17_09
at_At2g01940 - no entry null
at_At2g02080 - no entry null
at_At2g02100 - no entry null
at_At2g02120 - no entry null
at_At2g02130 - no entry null
at_At2g02140 - no entry null
at_At2g02470 - no entry null
at_At2g02620 - no entry null
at_At2g02630 - no entry null
at_At2g02680 - no entry null
at_At2g02690 - no entry null
at_At2g02700 - no entry null
at_At2g03000 - mips_10_05 "hypothetical protein"
mips_20
mips_20_25
mips_20_25_16
at_At2g04680 - no entry null
at_At2g07080 - mips_29_01 "putative gag-protease polyprotein"
mips_29_99
at_At2g13890 - no entry null
at_At2g13900 - no entry null
at_At2g13920 - no entry null
at_At2g13930 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_99
at_At2g15180 - no entry null
at_At2g15580 - mips_25_05_13 "putative RING-H2 zinc finger protein"
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_48
at_At2g15650 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_99
at_At2g15740 - no entry null
at_At2g16090 - mips_03_03 "unknown protein"
mips_63_17_09
at_At2g17180 - no entry null
at_At2g17730 - no entry null
at_At2g18670 - no entry null
at_At2g19260 - no entry null
at_At2g19610 - no entry null
at_At2g19650 - no entry null
at_At2g19660 - no entry null
at_At2g20650 - mips_06_13 "hypothetical protein"
mips_40_02
at_At2g21310 - mips_29_01 "putative retroelement pol polyprotein"
mips_29_99
at_At2g21420 - no entry null
at_At2g21830 - mips_04 "unknown protein"
at_At2g21840 - no entry null
at_At2g21850 - mips_04 "unknown protein"
mips_04_05
mips_04_05_01
mips_98
at_At2g22690 - mips_13_07 "unknown protein"
mips_14_10
mips_14_10_02
at_At2g23100 - no entry null
at_At2g23780 - no entry null
at_At2g24480 - mips_40_22 "hypothetical protein"
at_At2g24500 - mips_63_17_09 "putative C2H2-type zinc finger protein"
at_At2g24790 - no entry null
at_At2g25170 - mips_03_01_99 "putative chromodomain-helicase-DNA-binding protein"
mips_40_10_03
at_At2g25360 - mips_03_03 "hypothetical protein"
at_At2g25380 - no entry null
at_At2g26000 - mips_06_04 "hypothetical protein"
mips_08
mips_08_01
mips_40_04
mips_63_17
mips_63_17_09
at_At2g26010 - no entry null
at_At2g26020 - no entry null
at_At2g26130 - no entry null
at_At2g26350 - mips_06_10 "zinc-binding peroxisomal integral membrane protein (PEX10)"
mips_25_05_10
mips_30_19
mips_40_19
mips_63_17_09
at_At2g26940 - no entry null
at_At2g27940 - no entry null
at_At2g28200 - no entry null
at_At2g28340 - mips_25_05_10 "hypothetical protein"
mips_25_05_15
mips_35
mips_35_03
mips_35_03_12
at_At2g28460 - no entry null
at_At2g28710 - no entry null
at_At2g28840 - mips_63_07 "unknown protein"
at_At2g28920 - no entry null
at_At2g30290 - mips_08_13 "putative vacuolar sorting receptor"
mips_13_07
mips_40_27
mips_63_07
at_At2g31650 - no entry null
at_At2g31760 - no entry null
at_At2g31770 - no entry null
at_At2g31780 - no entry null
at_At2g33500 - mips_25_05_10 "putative CONSTANS-like B-box zinc finger protein"
mips_40_04_05
at_At2g34000 - no entry null
at_At2g34990 - no entry null
at_At2g35000 - no entry null
at_At2g35420 - no entry null
at_At2g35910 - no entry null
at_At2g35930 - mips_40_10_05 "unknown protein"
at_At2g37430 - no entry null
at_At2g37520 - mips_40_27 "unknown protein"
mips_40_27_99
mips_40_99
mips_45
mips_45_03
mips_63_03_01
at_At2g37740 - no entry null
at_At2g37800 - no entry null
at_At2g38190 - no entry null
at_At2g39100 - no entry null
at_At2g39720 - mips_45 "unknown protein"
mips_45_03
mips_45_03_17
at_At2g39830 - mips_11_05_01 "hypothetical protein"
mips_25_05_10
mips_30_04
mips_67_01
mips_67_04
at_At2g40050 - no entry null
at_At2g42350 - no entry null
at_At2g42360 - no entry null
at_At2g42410 - no entry null
at_At2g43220 - no entry null
at_At2g43510 - no entry null
at_At2g43520 - no entry null
at_At2g43530 - no entry null
at_At2g43550 - no entry null
at_At2g43600 - mips_11_05_03 "putative endochitinase"
mips_30_01
at_At2g44330 - mips_63_17_09 "putative protein"
at_At2g45050 - mips_01_02_04 "putative GATA-type zinc finger transcription factor"
mips_25_05_10
at_At2g45120 - no entry null
at_At2g46160 - no entry null
at_At2g47560 - no entry null
at_At2g47890 - mips_11_01 "putative CONSTANS-like B-box zinc finger protein"
at_At3g06740 - no entry null
at_At3g06990 - no entry null
at_At3g07000 - no entry null
at_At3g07650 - mips_25_03 "unknown protein"
at_At3g07920 - mips_05_01 "putative eukaryotic translation initiation factor 2 beta subunit (EIF-2-BETA)"
mips_05_01_01
mips_05_04_01
mips_05_07
mips_62_01
mips_62_01_07
mips_62_01_99
mips_62_02_03
mips_63_03_03
at_At3g08020 - no entry null
at_At3g10470 - no entry null
at_At3g10910 - no entry null
at_At3g11110 - no entry null
at_At3g12980 - mips_13_03 "putative CREB-binding protein"
mips_13_03_01
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At3g13430 - mips_40_22 "unknown protein"
mips_45_03_17
at_At3g13590 - no entry null
at_At3g13760 - no entry null
at_At3g13810 - no entry null
at_At3g14250 - mips_04_05_99 "hypothetical protein"
at_At3g14320 - no entry null
at_At3g15740 - mips_25_03 "putative RING zinc finger protein"
mips_40_07
mips_45
mips_45_03
mips_45_03_17
at_At3g16600 - mips_03_01_99 "putative DNA-binding protein"
at_At3g16720 - mips_63_17_09 "putative RING zinc finger protein"
at_At3g19380 - mips_05 "hypothetical protein"
mips_06_04
mips_08_01
mips_30_10
mips_30_10_05
mips_40_10_05
at_At3g19580 - no entry null
at_At3g20750 - mips_01_02 "hypothetical protein"
mips_01_02_04
at_At3g21010 - mips_29_01 "unknown protein"
mips_29_99
at_At3g21030 - mips_29 "hypothetical protein"
mips_29_01
mips_29_99
at_At3g21150 - no entry null
at_At3g23130 - no entry null
at_At3g23280 - mips_30_04 "unknown protein"
mips_40_07
mips_40_08
mips_63_07
at_At3g24800 - mips_63_17 "PRT1"
mips_63_17_09
at_At3g25940 - mips_04_01 "hypothetical protein"
mips_04_01_01
at_At3g26550 - mips_04_05 "hypothetical protein"
mips_04_05_01
at_At3g27473 - no entry null
at_At3g27500 - no entry null
at_At3g27710 - mips_63_17_09 "putative protein"
at_At3g27970 - mips_01_03 "hypothetical protein"
mips_01_03_16
mips_62
mips_62_02
mips_62_02_01
mips_63_03_03
at_At3g28620 - no entry null
at_At3g28650 - no entry null
at_At3g28880 - mips_63_07 "hypothetical protein"
at_At3g29340 - mips_04 "hypothetical protein"
mips_40_10
mips_63_17_09
at_At3g30460 - mips_45 "RING zinc finger protein"
mips_45_03
mips_45_03_17
at_At3g42170 - mips_29_03 "putative transposase"
mips_29_99
mips_40_10_03
at_At3g42860 - mips_63_03_01 "putative protein"
mips_63_03_03
mips_63_17
mips_63_17_09
at_At3g43230 - no entry null
at_At3g43240 - no entry null
at_At3g43430 - no entry null
at_At3g43490 - no entry null
at_At3g43590 - mips_63_03_01 "putative protein"
mips_63_03_03
at_At3g43750 - no entry null
at_At3g43830 - mips_06_13 "putative protein"
mips_29
mips_29_01
at_At3g43890 - mips_04_05 "putative protein"
mips_04_05_01
at_At3g45170 - no entry null
at_At3g45470 - mips_04_05_99 "putative protein"
at_At3g45480 - mips_03_03 "putative protein"
at_At3g45510 - no entry null
at_At3g45520 - mips_29_01 "copia-like polyprotein"
mips_29_99
at_At3g45530 - no entry null
at_At3g45540 - mips_03_03 "putative protein"
at_At3g45570 - no entry null
at_At3g45580 - mips_14 "putative protein"
mips_14_04
mips_25
mips_63_17
mips_63_17_09
at_At3g45840 - no entry null
at_At3g46070 - no entry null
at_At3g46080 - no entry null
at_At3g46090 - no entry null
at_At3g46510 - mips_06_04 "arm repeat containing protein homolog"
mips_08_01
mips_13_07
mips_30_10_05
mips_40_10_05
at_At3g46620 - no entry null
at_At3g46800 - no entry null
at_At3g46810 - mips_04 "putative protein"
mips_04_05
mips_04_05_01
mips_98
at_At3g47180 - mips_48 "zinc-finger protein-like protein"
at_At3g47820 - mips_05 "putative protein"
mips_06
mips_06_04
mips_08
mips_08_01
mips_30
mips_30_10
mips_30_10_05
mips_40_03
mips_40_10
mips_40_10_05
mips_63
mips_63_01
at_At3g47990 - no entry null
at_At3g48030 - no entry null
at_At3g48360 - mips_25_05_25 "unknown protein"
mips_30_04
at_At3g48400 - no entry null
at_At3g49810 - mips_08_01 "putative protein"
mips_30_10
mips_30_10_05
mips_40_10_05
at_At3g49930 - no entry null
at_At3g50700 - no entry null
at_At3g52450 - mips_08_01 "putative protein"
mips_30_10
mips_30_10_05
at_At3g53410 - mips_63_17_09 "unknown protein"
at_At3g53600 - no entry null
at_At3g53680 - mips_03 "putative protein"
mips_03_01
mips_03_01_99
mips_04
mips_30
mips_40_10
mips_63_17_09
mips_63_19
at_At3g53690 - mips_04_05_99 "unknown protein"
at_At3g54780 - mips_25 "putative protein"
mips_25_05
mips_25_05_10
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
mips_40_02
mips_40_27
mips_67
mips_67_01
mips_67_04
at_At3g54790 - mips_13_07 "putative protein"
mips_40_10_05
at_At3g54810 - mips_25_05_15 "putative protein"
mips_35
mips_35_03
mips_35_03_12
at_At3g54850 - mips_08_01 "putative protein"
mips_13_07
mips_30_10_05
at_At3g55070 - mips_13_07 "putative protein"
mips_14_10
mips_14_10_02
at_At3g55300 - mips_10_01 "putative protein"
mips_10_01_01
mips_29
mips_29_02
at_At3g55530 - mips_25 "putative protein"
mips_25_03
mips_25_05
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_40_02
at_At3g57480 - no entry null
at_At3g58030 - mips_04_05_99 "unknown protein"
mips_10_05
mips_25_05_25
mips_40_02
mips_63_17
mips_63_17_09
at_At3g58720 - mips_63_17 "putative protein"
mips_63_17_09
at_At3g59720 - mips_29_01 "copia-type reverse transcriptase-like protein"
at_At3g60080 - mips_06_13 "putative protein"
mips_13_11
mips_63_17_09
at_At3g60300 - no entry null
at_At3g60530 - no entry null
at_At3g61180 - mips_30_19 "unknown protein"
mips_40_19
at_At3g61330 - mips_29_01 "copia-type polyprotein"
mips_29_02
mips_29_99
at_At3g61460 - no entry null
at_At3g61550 - no entry null
at_At3g62240 - no entry null
at_At3g62520 - mips_29 "putative protein"
mips_29_02
mips_29_03
mips_40_10_03
mips_63_03
at_At3g62690 - no entry null
at_At3g62970 - mips_03 "putative protein"
mips_03_01
mips_03_01_99
mips_04
mips_40
mips_40_10
mips_40_10_03
mips_63
mips_63_03
mips_63_03_03
mips_63_17
mips_63_17_09
mips_63_19
mips_99
at_At4g01350 - no entry null
at_At4g01930 - no entry null
at_At4g02180 - no entry null
at_At4g02670 - no entry null
at_At4g03920 - mips_29_01 "putative protein"
at_At4g04240 - mips_29_01 "putative protein"
at_At4g04560 - mips_29_01 "putative transposon protein"
mips_29_99
at_At4g05360 - mips_03_01_05 "putative protein"
mips_03_03_02
at_At4g08590 - mips_14_01_01 "putative zinc finger protein"
mips_14_01_05
mips_63_03_01
at_At4g09100 - no entry null
at_At4g09130 - no entry null
at_At4g09560 - no entry null
at_At4g10150 - no entry null
at_At4g10160 - no entry null
at_At4g10370 - no entry null
at_At4g10680 - no entry null
at_At4g11360 - no entry null
at_At4g11370 - no entry null
at_At4g11390 - no entry null
at_At4g11540 - no entry null
at_At4g11680 - mips_40_19 "unknown protein"
at_At4g12140 - mips_63_03_03 "putative protein"
at_At4g12150 - no entry null
at_At4g12190 - no entry null
at_At4g12210 - no entry null
at_At4g13100 - no entry null
at_At4g13130 - no entry null
at_At4g14920 - no entry null
at_At4g15250 - no entry null
at_At4g17810 - no entry null
at_At4g17910 - no entry null
at_At4g17920 - no entry null
at_At4g19670 - mips_04_05 "putative protein"
mips_04_05_99
mips_06_07
mips_30
mips_30_04
mips_40_04
mips_40_04_05
mips_63_01
mips_63_17
mips_63_17_09
at_At4g21070 - no entry null
at_At4g23450 - mips_05_04 "unknown protein"
mips_40_10_99
mips_63_17
mips_63_17_09
at_At4g24470 - mips_25_05_15 "unknown protein"
mips_35
mips_35_03
mips_35_03_12
at_At4g27310 - mips_11_01 "putative protein"
at_At4g27470 - no entry null
at_At4g28890 - no entry null
at_At4g30370 - no entry null
at_At4g30400 - mips_06_13 "unknown protein"
at_At4g31420 - no entry null
at_At4g32600 - no entry null
at_At4g32890 - no entry null
at_At4g33240 - mips_06_13_01 "putative protein"
mips_08_13
mips_30_25
at_At4g34040 - mips_45 "putative protein"
mips_45_03
mips_45_03_17
at_At4g34370 - mips_03 "unknown protein"
mips_03_03
mips_14
mips_14_04
mips_25
mips_63_03
mips_63_17
mips_63_17_09
at_At4g34680 - mips_25_05_10 "GATA transcription factor 3"
mips_25_05_17
mips_37
mips_37_03
mips_37_03_17
at_At4g35280 - no entry null
at_At4g35840 - mips_06_04 "putative protein"
mips_08
mips_08_01
at_At4g36550 - no entry null
at_At4g36860 - no entry null
at_At4g37610 - mips_25_05_25 "putative protein"
mips_30_04
at_At4g37880 - mips_13_07 "putative protein"
mips_14_10
mips_14_10_02
at_At4g38140 - no entry null
at_At4g38960 - no entry null
at_At4g39070 - no entry null
at_At5g01480 - mips_04 "putative protein"
at_At5g01880 - no entry null
at_At5g01940 - mips_05_04_01 "translation initiation factor eIF-2 beta chain-like protein"
mips_62_01_99
mips_62_02_03
at_At5g01980 - mips_06_10 "putative protein"
mips_63_17_09
at_At5g02330 - no entry null
at_At5g02350 - mips_04 "putative protein"
mips_04_05
mips_04_05_01
mips_98
mips_99
at_At5g02750 - mips_20 "putative protein"
mips_20_25
mips_20_25_16
mips_63_17
mips_63_17_09
at_At5g03150 - no entry null
at_At5g03200 - mips_04_05_99 "unknown protein"
mips_14_10
mips_14_10_02
mips_48
mips_63_17_09
at_At5g03510 - no entry null
at_At5g04340 - no entry null
at_At5g04390 - no entry null
at_At5g05130 - mips_03_01_05 "helicase-like transcription factor-like protein"
at_At5g05280 - no entry null
at_At5g05660 - mips_13_07 "putative protein"
mips_30_27
mips_30_27_01
mips_40_27
mips_40_27_01
mips_63_07
at_At5g05810 - no entry null
at_At5g06070 - mips_14_10 "putative protein"
mips_14_10_02
mips_40_10_07
at_At5g06420 - mips_63_03_03 "putative protein"
at_At5g06490 - no entry null
at_At5g07040 - no entry null
at_At5g07060 - mips_10_01 "RNA-binding protein-like"
mips_30
mips_63_03
at_At5g07270 - mips_30_10 "putative protein"
mips_40_10_03
at_At5g09630 - mips_13_07 "unknown protein"
mips_14_10
mips_14_10_02
at_At5g10380 - mips_40_04_05 "putative protein"
at_At5g10650 - mips_45_03_17 "Pspzf zinc finger protein - like"
at_At5g14420 - mips_01_06 "putative protein"
mips_06_04
mips_08
mips_08_07
mips_08_07_99
mips_13_03
mips_13_03_01
mips_13_07
mips_40_02
mips_40_09
mips_48
mips_63_09
mips_63_17
mips_63_17_01
mips_67_99
at_At5g15480 - no entry null
at_At5g15790 - no entry null
at_At5g15820 - mips_45_03_17 "putative protein"
at_At5g15850 - no entry null
at_At5g18260 - no entry null
at_At5g18330 - mips_05 "putative protein"
mips_06_04
mips_08
mips_08_01
mips_30_10
mips_30_10_05
mips_40_10_05
at_At5g18340 - no entry null
at_At5g18650 - no entry null
at_At5g19080 - mips_48 "putative protein"
at_At5g19430 - no entry null
at_At5g20220 - no entry null
at_At5g20920 - mips_05_01 "translation initiation factor eIF-2 beta chain - like protein"
mips_05_01_01
mips_05_04_01
mips_05_07
mips_62_01
mips_62_01_07
mips_62_01_99
mips_62_02_03
mips_63_03_03
at_At5g22000 - mips_04 "RING-H2 finger protein RHF2a"
mips_06
mips_63_01
at_At5g22480 - mips_14_01 "zinc finger protein-like"
mips_14_01_01
mips_14_01_05
mips_40_10_07
at_At5g22920 - no entry null
at_At5g24870 - no entry null
at_At5g24930 - mips_10_01 "putative protein"
mips_10_01_01
at_At5g25490 - mips_40_10_05 "putative protein"
mips_67_01
mips_67_01_05
at_At5g26190 - no entry null
at_At5g35210 - mips_25_05_13 "putative protein"
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
at_At5g35820 - no entry null
at_At5g36240 - mips_04 "putative protein"
mips_04_99
mips_98
at_At5g36740 - no entry null
at_At5g37200 - no entry null
at_At5g37230 - mips_63_03_03 "putative protein"
at_At5g37250 - no entry null
at_At5g37280 - no entry null
at_At5g37560 - no entry null
at_At5g37620 - no entry null
at_At5g38690 - no entry null
at_At5g39550 - mips_14_01 "zinc finger -like protein"
mips_14_01_01
mips_14_01_05
mips_63_03_01
mips_63_17
mips_63_17_09
at_At5g40140 - mips_06_10 "putative protein"
mips_08_01
mips_30_10
mips_30_10_05
mips_40_10_05
mips_67_01
mips_67_01_05
at_At5g40310 - mips_01_03 "zinc finger -like protein"
mips_01_03_16
mips_04_05_05
mips_05_04
mips_62
mips_62_02
mips_62_02_01
mips_63_03_01
mips_63_03_03
at_At5g40320 - no entry null
at_At5g41350 - no entry null
at_At5g41400 - no entry null
at_At5g41440 - no entry null
at_At5g41450 - no entry null
at_At5g42200 - no entry null
at_At5g42540 - mips_01_03_16 "5'-3' exoribonuclease 2"
mips_04_01
mips_04_01_04
mips_08_01
at_At5g42840 - no entry null
at_At5g43040 - no entry null
at_At5g43170 - mips_63_01 "Cys2/His2-type zinc finger protein 3 (dbj|BAA85109.1)"
mips_63_03
at_At5g43200 - mips_63_03_03 "putative protein"
at_At5g43420 - no entry null
at_At5g43530 - mips_03_01_09 "DNA repair protein-like"
mips_03_01_99
at_At5g43540 - no entry null
at_At5g43630 - no entry null
at_At5g44420 - no entry null
at_At5g44430 - no entry null
at_At5g44770 - no entry null
at_At5g44800 - mips_03_01_99 "helicase-like protein"
at_At5g45730 - no entry null
at_At5g46660 - no entry null
at_At5g47390 - no entry null
at_At5g47610 - mips_45 "unknown protein"
mips_45_03
mips_45_03_17
at_At5g48250 - no entry null
at_At5g52380 - no entry null
at_At5g54020 - no entry null
at_At5g54030 - no entry null
at_At5g54050 - no entry null
at_At5g54310 - mips_04_09 "unknown protein"
mips_40_10_05
at_At5g54990 - mips_40_19 "putative protein"
at_At5g55770 - no entry null
at_At5g55780 - no entry null
at_At5g56200 - no entry null
at_At5g56340 - mips_03_01_99 "putative protein"
mips_25_03
mips_25_05_13
mips_33
mips_33_03
mips_33_03_13
mips_35
mips_35_03
mips_35_03_17
mips_40_10_03
at_At5g56860 - mips_04_01 "unknown protein"
mips_04_01_04
at_At5g57660 - mips_11_01 "CONSTANS-like B-box zinc finger protein-like"
mips_25_03
at_At5g57740 - no entry null
at_At5g57750 - no entry null
at_At5g59550 - mips_06_10 "unknown protein"
mips_45
mips_45_03
mips_45_03_17
at_At5g59820 - no entry null
at_At5g59920 - no entry null
at_At5g59930 - no entry null
at_At5g59940 - no entry null
at_At5g60250 - no entry null
at_At5g60410 - no entry null
at_At5g60470 - no entry null
at_At5g60820 - no entry null
at_At5g61470 - no entry null
at_At5g62560 - mips_06_04 "putative protein"
mips_08_01
mips_10_01
mips_10_01_01
mips_30
mips_30_10_05
mips_40_10_05
at_At5g63160 - mips_25_05_25 "putative protein"
mips_30_04
mips_40_04
at_At5g63660 - no entry null
at_At5g63730 - mips_63_17 "ARI-like RING zinc finger protein-like"
mips_63_17_09
at_At5g63750 - mips_63_17_09 "ARI-like RING zinc finger protein-like"
at_At5g63760 - mips_63_17 "putative protein"
mips_63_17_09
at_At5g63970 - mips_01 "putative protein"
mips_01_06
mips_06
mips_06_04
mips_08
mips_08_07
mips_08_07_99
mips_13
mips_13_07
mips_40_02
mips_40_03
mips_40_09
mips_48
mips_63
mips_63_09
mips_63_17
mips_63_17_01
mips_67
mips_67_99
at_At5g64920 - no entry null
at_At5g65200 - mips_06_04 "putative protein"
mips_08
mips_08_01
mips_30_10
mips_30_10_05
mips_40_10_05
at_At5g66070 - mips_45 "putative protein"
mips_45_03
mips_45_03_17
at_At5g66160 - mips_06_13_04 "ReMembR-H2 protein JR700 (gb|AAF32325.1)"
mips_08_13
mips_40_25
at_At5g66320 - mips_25_05_15 "GATA-binding transcription factor-like protein"
mips_35
mips_35_03
mips_35_03_12
at_At5g66730 - no entry null
at_At5g67120 - mips_43 "putative protein"
mips_43_03
mips_43_03_13
mips_45
mips_45_03
mips_45_03_17
mips_47_03_01
mips_48
at_At5g67340 - mips_06_04 "putative protein"
mips_08
mips_10_01
mips_10_01_01
mips_40_03
mips_63_01
at_At5g67450 - no entry null
------------------